Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_I18
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 57 1e-08
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 55 8e-08
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 50 2e-06
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 50 2e-06
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 39 0.005
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 39 0.005
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 29 3.3
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 29 3.3
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 66.5 bits (155), Expect = 2e-11
Identities = 42/134 (31%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Frame = +3
Query: 183 QNVICKAR-NGYYKTDANCDTYIECRDYQA-TNMICPDGLHFNPSVEWPAYPCGYPVEVT 356
Q+ C + +G Y+ + +C ++C + + C L FN C YP +V+
Sbjct: 1178 QSAFCDGKEDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTG----KCDYPQKVS 1233
Query: 357 CVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFS 536
G QT +C ++G F A NC + CV GR M CP G FNP S
Sbjct: 1234 ----GCENHGQTNGECS-EHGSFI---ADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLS 1285
Query: 537 RCDWADLVPSCDAE 578
CDW VPSC +
Sbjct: 1286 VCDWPSAVPSCSGQ 1299
Score = 33.5 bits (73), Expect = 0.21
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 7/137 (5%)
Frame = +3
Query: 114 SYIYLALLVAASHVQSTPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDG 293
SY +++ V ST AA A +G + + YI+C + A C +
Sbjct: 667 SYESYTTQYSSNDVPSTSAAPIGDRCSLDA-SGLFSLGCS-QKYIQCSNGAAIVRRCGES 724
Query: 294 LHFNPSVEWPAYPCGYPVEV-TCVGRGSI-QPAQTTP---DCPHQYGIFKH--PNASPTN 452
L+FN + + C Y EV C +GS P TTP + YGI P+ + T
Sbjct: 725 LYFNEATQ----ECTYRDEVPECGSQGSTSSPVITTPGQDQSSNYYGIPSDDVPSTTQTP 780
Query: 453 CGQYRTCVGGRAFDMVC 503
G V FD+ C
Sbjct: 781 VGDRCAYVASGLFDLGC 797
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 462 YRTCVGGRAFDMVCPPGLAFNPDFSRCDW 548
+ +C F CPPG FN + CD+
Sbjct: 209 FYSCSNNMVFQRYCPPGTVFNINQQSCDF 237
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 57.2 bits (132), Expect = 1e-08
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Frame = +3
Query: 159 STPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEWPAYPCG 338
+T A+ NV +G+Y NC ++ C ++ +M CP GL ++ S+++ C
Sbjct: 470 ATTTTASNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKY----CT 525
Query: 339 YPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNAS--------------PTNCGQYRTCV 476
C + P TT P + P + P++C ++ CV
Sbjct: 526 TSTASGCSVTTTRAPTTTTKSAPTVTTTTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCV 585
Query: 477 GGRAFDMVCPPGLAFNPDFSRCDWAD 554
G +++ CP GL+F+ D CD D
Sbjct: 586 NGISYNFECPNGLSFHADTMMCDRPD 611
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 141 AASHVQSTPAAATAQNVICKA-RNGYYKTDANCDTYIECRDYQATNMICPDGLHFN 305
+A V +T A T K ++G++ ++C +I C + + N CP+GL F+
Sbjct: 546 SAPTVTTTTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFH 601
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 54.8 bits (126), Expect = 8e-08
Identities = 48/189 (25%), Positives = 72/189 (38%), Gaps = 1/189 (0%)
Frame = +3
Query: 195 CKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVTCVGRGS 374
C++ K++ + + + C + A CP L FNP++ C +P V S
Sbjct: 179 CESDGNISKSECS-NVFFSCSEGIAHRRNCPANLVFNPAIS----SCDWPKNVMDCSEKS 233
Query: 375 IQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWAD 554
+P +C G F S + + C G M CP GL F+ CD+
Sbjct: 234 EKPQ----NCGEVDGYFSFGRCSSS----FSACTNGIPIVMFCPDGLMFSEKNQMCDYEW 285
Query: 555 LVPSCDAEKFLGFTCPPAPLDAIGNPLNNVINYKYEGNCY-YFFSCEQNRAXLLSCDIGL 731
V CD E GF +A+ P N+ N Y +C SC+ R + C L
Sbjct: 286 NVDECDLES-SGFMENYKASEAL-TPCTNMDNGLYALDCTPRVLSCQNGRENIFECPPSL 343
Query: 732 AFXPTTGRC 758
F + C
Sbjct: 344 VFNENSLIC 352
Score = 35.9 bits (79), Expect = 0.039
Identities = 44/203 (21%), Positives = 72/203 (35%), Gaps = 7/203 (3%)
Frame = +3
Query: 195 CKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPS-----VEWPAYPCGYPVEVTC 359
C +GY+ ++ C + M CPDGL F+ EW C +E +
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECD--LESSG 296
Query: 360 VGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSR 539
TP G++ + +P + +C GR CPP L FN +
Sbjct: 297 FMENYKASEALTPCTNMDNGLYAL-DCTP----RVLSCQNGRENIFECPPSLVFNENSLI 351
Query: 540 CDWADLVPSCDAEKFLGFTCPPAPLDAIGNPLNNVINYKYEGNCYYFFSCEQNRAXLLSC 719
CD+ + C E L A + ++ + + Y+ C + C
Sbjct: 352 CDYPETSLKCCMEDAL--LIRDASIGTYDCSIDGLFSSTLCSRNYH--KCSNGQLIPHEC 407
Query: 720 -DIGLAFXPTTGRCVDAXRV-QC 782
D F + +CVD+ + QC
Sbjct: 408 ADSNAVFSASAAKCVDSSLLEQC 430
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 459 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAE 578
++ CV G A M CP L ++ + CDW V C E
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEE 80
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 50.4 bits (115), Expect = 2e-06
Identities = 38/127 (29%), Positives = 52/127 (40%), Gaps = 2/127 (1%)
Frame = +3
Query: 195 CKARNGYYKTDANCDT-YIECRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVT-CVGR 368
C+ + + C T ++ C A M CP L FNP++ C +P +V C G
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVAECAGL 302
Query: 369 GSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDW 548
+ QP C G F S + + C GRA M CP GL F+ RCD+
Sbjct: 303 PTPQPT-----CEED-GYFSFGQCSSS----FTACTNGRAIVMFCPAGLKFSESTVRCDY 352
Query: 549 ADLVPSC 569
V C
Sbjct: 353 ESNVSEC 359
Score = 49.6 bits (113), Expect = 3e-06
Identities = 37/111 (33%), Positives = 44/111 (39%), Gaps = 1/111 (0%)
Frame = +3
Query: 429 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPA 608
HPN + + TC GG A M CP L FNP CDW V C G P
Sbjct: 255 HPNGVCST--NFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC-----AGLPTPQP 307
Query: 609 PLDAIGNPLNNVINYKYEGNC-YYFFSCEQNRAXLLSCDIGLAFXPTTGRC 758
+ G Y G C F +C RA ++ C GL F +T RC
Sbjct: 308 TCEEDG--------YFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRC 350
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 459 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 572
Q+ TC GG A M CP L +N CDW V C+
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 615 DAIGNPLNNVINYKYE-GNC--YYFFSCEQNRAXLLSCDIGLAFXPTTGRCV 761
+ + N N+ + Y G C YYFF C N A LSC L + + +C+
Sbjct: 132 ETVENVCENLEDGAYSSGGCTTYYFF-CTTNTARFLSCPTPLFYDADSQKCI 182
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 462 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 569
Y C A + CP L ++ D +C W LV C
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 50.4 bits (115), Expect = 2e-06
Identities = 38/127 (29%), Positives = 52/127 (40%), Gaps = 2/127 (1%)
Frame = +3
Query: 195 CKARNGYYKTDANCDT-YIECRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVT-CVGR 368
C+ + + C T ++ C A M CP L FNP++ C +P +V C G
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVAECAGL 302
Query: 369 GSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDW 548
+ QP C G F S + + C GRA M CP GL F+ RCD+
Sbjct: 303 PTPQPT-----CEED-GYFSFGQCSSS----FTACTNGRAIVMFCPAGLKFSESTVRCDY 352
Query: 549 ADLVPSC 569
V C
Sbjct: 353 ESNVSEC 359
Score = 49.6 bits (113), Expect = 3e-06
Identities = 37/111 (33%), Positives = 44/111 (39%), Gaps = 1/111 (0%)
Frame = +3
Query: 429 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPA 608
HPN + + TC GG A M CP L FNP CDW V C G P
Sbjct: 255 HPNGVCST--NFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC-----AGLPTPQP 307
Query: 609 PLDAIGNPLNNVINYKYEGNC-YYFFSCEQNRAXLLSCDIGLAFXPTTGRC 758
+ G Y G C F +C RA ++ C GL F +T RC
Sbjct: 308 TCEEDG--------YFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRC 350
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 459 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 572
Q+ TC GG A M CP L +N CDW V C+
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 615 DAIGNPLNNVINYKYE-GNC--YYFFSCEQNRAXLLSCDIGLAFXPTTGRCV 761
+ + N N+ + Y G C YYFF C N A LSC L + + +C+
Sbjct: 132 ETVENVCENLEDGAYSSGGCTTYYFF-CTTNTARFLSCPTPLFYDADSQKCI 182
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 462 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 569
Y C A + CP L ++ D +C W LV C
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 44.0 bits (99), Expect = 1e-04
Identities = 34/123 (27%), Positives = 44/123 (35%), Gaps = 2/123 (1%)
Frame = +3
Query: 207 NGYYKTDANCDTY-IECRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVTCVGRGSIQP 383
+GYY A C +Y C D Q M CP+ L F+ E +P P
Sbjct: 960 DGYYS--AGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDRTPP 1017
Query: 384 AQTTPDCP-HQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 560
A + C G+ SP Y C GRAF C L +N D C++
Sbjct: 1018 AVPSDFCTIRSNGLHHLKMCSP----HYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTN 1073
Query: 561 PSC 569
C
Sbjct: 1074 KDC 1076
Score = 41.9 bits (94), Expect = 6e-04
Identities = 50/197 (25%), Positives = 75/197 (38%), Gaps = 8/197 (4%)
Frame = +3
Query: 195 CKARNGYYKTDANCD--TYIE-CRDYQATNMICPDGLHFNPSVEWPAYPCGYP-VEVTCV 362
C A Y K + CD ++E C +Y+ T P + ++ Y YP ++ T
Sbjct: 817 CPAGLFYSKLNNRCDYKEHVEDCPEYKPTPSTTP-AAEQPGTTKYTTY--NYPNIDYTST 873
Query: 363 GRGSIQPAQTTPDCPHQYGIFKHPN---ASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDF 533
G P TTP + P+ A P Y C+ GR+ C PGL +N
Sbjct: 874 TPG---PVDTTP-LAKAFSCSGRPDGIYALPYCSQDYVQCMQGRSLISSCAPGLFYNEKN 929
Query: 534 SRCDWADLVPSCDAEKFLGFTCPPAPLDAIGNPLNNVINYKYEGNC-YYFFSCEQNRAXL 710
C + V +C K +D+ N + Y C Y+FSC +
Sbjct: 930 GMCAYKHTVDTCKIGKGSDI------IDS--NACFGKSDGYYSAGCSSYYFSCIDEQIRK 981
Query: 711 LSCDIGLAFXPTTGRCV 761
+SC L F + +CV
Sbjct: 982 MSCPNSLKFSKESEKCV 998
Score = 41.5 bits (93), Expect = 8e-04
Identities = 47/204 (23%), Positives = 73/204 (35%), Gaps = 2/204 (0%)
Frame = +3
Query: 153 VQSTPAAATAQNVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEWPAY 329
V +TP A C R +G Y Y++C ++ C GL +N AY
Sbjct: 878 VDTTPLAKAFS---CSGRPDGIYALPYCSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAY 934
Query: 330 PCGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYR-TCVGGRAFDMVCP 506
+ V+ +G+GS D +G K C Y +C+ + M CP
Sbjct: 935 K--HTVDTCKIGKGS-----DIIDSNACFG--KSDGYYSAGCSSYYFSCIDEQIRKMSCP 985
Query: 507 PGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPAPLDAIGNPLNNVINYKYEGNCYYFFS 686
L F+ + +C + C L T P P D N + + K ++
Sbjct: 986 NSLKFSKESEKCVFPIDAKECSIATTLDRTPPAVPSDFCTIRSNGLHHLKMCSP--HYIV 1043
Query: 687 CEQNRAXLLSCDIGLAFXPTTGRC 758
C+ RA +C L + T C
Sbjct: 1044 CDNGRAFSGTCIAPLVYNGDTQTC 1067
Score = 33.9 bits (74), Expect = 0.16
Identities = 35/132 (26%), Positives = 51/132 (38%), Gaps = 12/132 (9%)
Frame = +3
Query: 195 CKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEW---------PAYPCGYPV 347
CK R+G + +++ C + + C D L F+ V P P PV
Sbjct: 353 CKNRDGIFGIKECHASFLSCDNGVGRVIQCADNLVFDTRVSACEFAAICLEPRKPEDVPV 412
Query: 348 EVTCVGRGSIQPAQTTPDCPHQYGIFKHPNASPTN--CGQ-YRTCVGGRAFDMVCPPGLA 518
G + +PA+ D + PN C + + TC GRAF CP L
Sbjct: 413 LYNHGGAYNERPAEVKVD----FDCTGKPNGKYIKEACTKSFFTCHDGRAFANDCPGDLV 468
Query: 519 FNPDFSRCDWAD 554
FN CD+A+
Sbjct: 469 FNKATGTCDFAE 480
Score = 32.3 bits (70), Expect = 0.47
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 471 CVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 569
C G+ CP L FNP CD++ V C
Sbjct: 594 CANGQVVATTCPANLIFNPYVGECDYSTNVRDC 626
Score = 30.7 bits (66), Expect = 1.4
Identities = 36/143 (25%), Positives = 54/143 (37%), Gaps = 5/143 (3%)
Frame = +3
Query: 195 CKARNGYYKTDANCDTY--IE-CRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVTCVG 365
C + Y + CD +E C +Y+ T P P + + Y GY T
Sbjct: 718 CPSGLYYSRLQDKCDVKENVEGCPEYKPTTDATPAAEQ--PVISYQNY--GYSQSTT--- 770
Query: 366 RGSIQPAQTTPDCPHQYGIFKHPNAS-PTNCGQYR-TCVGGRAFDMVCPPGLAFNPDFSR 539
+ P+ TTP H + N + +C Y +C CP GL ++ +R
Sbjct: 771 -KAYNPSVTTPSPQHAAFCERLENGNYGLDCEDYYISCNNFETTINRCPAGLFYSKLNNR 829
Query: 540 CDWADLVPSCDAEKFLGFTCPPA 608
CD+ + V C K T P A
Sbjct: 830 CDYKEHVEDCPEYKPTPSTTPAA 852
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 396 PDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCD 545
P CP G++ +S +Y CV ++ CP GL F+ +RC+
Sbjct: 41 PPCPDGDGLYAVGCSS-----KYLQCVNNVEYEQSCPEGLYFDRLLARCE 85
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 381 PAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 560
PA+TT + P + A Y+ CV G+ +C GL F+P+ +RC AD +
Sbjct: 517 PAETTTEVP---ACVEGATAIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQI 573
Query: 561 PSC 569
C
Sbjct: 574 AEC 576
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 459 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 569
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 462 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 569
Y C G M CP LAF+ CD+ VP C
Sbjct: 231 YTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 381 PAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 560
PA+TT + P + A Y+ CV G+ +C GL F+P+ +RC AD +
Sbjct: 517 PAETTTEVP---ACVEGATAIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQI 573
Query: 561 PSC 569
C
Sbjct: 574 AEC 576
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 459 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 569
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 462 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 569
Y C G M CP LAF+ CD+ VP C
Sbjct: 231 YTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 459 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 569
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
>Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical
protein T16G12.4 protein.
Length = 213
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 217 TKQTRIVIHTLNAGTIKLLT*YARMVCTLILAW 315
TK+T V+ TL TI L++ + CTLIL W
Sbjct: 70 TKETPFVLVTLAINTIVLISAITQDFCTLILTW 102
>Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical
protein F16H6.1 protein.
Length = 555
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 564 SCDAEKFLGFTCPPAPLDAI--GNPLNNVINYKYEGNCYY 677
S A K+L C L+ I P+ N ++Y GNCYY
Sbjct: 139 SSSAGKWLSGDCDAMILNFICETTPITNTCTFQYNGNCYY 178
>Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical
protein B0365.6 protein.
Length = 545
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 585 LGFTCPPAPLDAIGNPLNNVINYKYEGNCYY 677
L F C AP +P+ + +++Y GNCYY
Sbjct: 145 LNFICETAPT----SPITDTCSFQYNGNCYY 171
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Frame = +3
Query: 342 PVEVTCVGRGSIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAFDMVCPP 509
P VTC SI P T CP Y + N P +C G A D +CPP
Sbjct: 1108 PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAIDGLCPP 1167
Query: 510 G 512
G
Sbjct: 1168 G 1168
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Frame = +3
Query: 342 PVEVTCVGRGSIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAFDMVCPP 509
P VTC SI P T CP Y + N P +C G A D +CPP
Sbjct: 450 PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAIDGLCPP 509
Query: 510 G 512
G
Sbjct: 510 G 510
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Frame = +3
Query: 342 PVEVTCVGRGSIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAFDMVCPP 509
P VTC SI P T CP Y + N P +C G A D +CPP
Sbjct: 450 PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAIDGLCPP 509
Query: 510 G 512
G
Sbjct: 510 G 510
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 10/94 (10%)
Frame = +3
Query: 327 YPCGYPVEVTCVGRGSIQPAQTTPDC-PHQYGI---FKHPNA-SPTNCGQYRTCVGGRAF 491
Y ++ C G+ P Q DC P +YG F PN C Q +C G
Sbjct: 1463 YGLNCTLDCECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNGFYGWYCSQSCSCQNGAHC 1522
Query: 492 D-----MVCPPGLAFNPDFSRCDWADLVPSCDAE 578
D +CP G + +C P+C +
Sbjct: 1523 DGADGRCLCPAGFQGDKCEQKCSEGSFGPACSQQ 1556
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 10/94 (10%)
Frame = +3
Query: 327 YPCGYPVEVTCVGRGSIQPAQTTPDC-PHQYGI---FKHPNA-SPTNCGQYRTCVGGRAF 491
Y ++ C G+ P Q DC P +YG F PN C Q +C G
Sbjct: 1463 YGLNCTLDCECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNGFYGWYCSQSCSCQNGAHC 1522
Query: 492 D-----MVCPPGLAFNPDFSRCDWADLVPSCDAE 578
D +CP G + +C P+C +
Sbjct: 1523 DGADGRCLCPAGFQGDKCEQKCSEGSFGPACSQQ 1556
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,739,275
Number of Sequences: 27780
Number of extensions: 470129
Number of successful extensions: 1349
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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