Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_I16
         (917 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical pr...    33   0.29 
AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical ...    31   1.5  
U41033-6|AAA82378.1|  859|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical
           protein C30A5.3 protein.
          Length = 223

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 597 YKDTRRFPLEAPSCALLFRPXRLPDTCPPFSLREAWRFLIA 719
           Y+  R+F +E    ALL +   +P+TC   +  E W FL A
Sbjct: 71  YEHLRQFCIELNGLALLLQRECIPETCQQMTATEQWIFLCA 111


>AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical
           protein M151.1 protein.
          Length = 402

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 17/73 (23%), Positives = 30/73 (41%)
 Frame = -1

Query: 818 YRIRRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTGIR*AXGSEQES 639
           +R RR     +    H  AW+ R  P    ++ +  K  ++ K E + G     G+E+  
Sbjct: 81  FRYRRMVFGAKDQLKHDKAWNNRSLPQKSRWNQASVKLAQYQKAEEKMGFIKVFGTEEFQ 140

Query: 638 ARGSFQGETPGIF 600
                +G+T   F
Sbjct: 141 NYSKRRGQTRNSF 153


>U41033-6|AAA82378.1|  859|Caenorhabditis elegans Hypothetical protein
            K09E3.7 protein.
          Length = 859

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
 Frame = +3

Query: 456  RTCEQKASKRPGTVKRPRCWR----FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 623
            R  EQ+ +    T+KR  C+      S      T    +  Q+RG  +  + K +R FP+
Sbjct: 715  RAIEQQRTVPASTLKREACFDRVDGLSYKRGNFTINGPLPTQLRG--SNMEAKQSR-FPV 771

Query: 624  --EAPSCALLFRPXRLPDTCPPFSLREAWRFLIAHAVXISVRCRSFAPSWAVCTNPPFSP 797
              + P+  L F P  +P   PP         +  +   IS   RS  P   + + P   P
Sbjct: 772  WNQHPTMPLSFTPQPVPSMIPPV--------ITPNPSMIS---RSTMP--LIMSYPNILP 818

Query: 798  TAAPYPVTIVLSPT 839
            TAAP  +  + SPT
Sbjct: 819  TAAPGAIAQINSPT 832


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,583,364
Number of Sequences: 27780
Number of extensions: 419007
Number of successful extensions: 1103
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)