Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_I11
(942 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC142723-1|AAI42724.1| 1181|Homo sapiens INADL protein protein. 39 0.030
BC142661-1|AAI42662.1| 1181|Homo sapiens INADL protein protein. 39 0.030
AL590374-4|CAH70420.1| 1801|Homo sapiens InaD-like (Drosophila) ... 39 0.030
AL590374-3|CAH70418.1| 1582|Homo sapiens InaD-like (Drosophila) ... 39 0.030
AL449143-2|CAI15925.1| 1801|Homo sapiens InaD-like (Drosophila) ... 39 0.030
AL449143-1|CAI15923.1| 1582|Homo sapiens InaD-like (Drosophila) ... 39 0.030
AL353802-3|CAI22262.1| 1801|Homo sapiens InaD-like (Drosophila) ... 39 0.030
AL353802-2|CAI22260.1| 1582|Homo sapiens InaD-like (Drosophila) ... 39 0.030
AL136458-3|CAI21737.1| 1801|Homo sapiens InaD-like (Drosophila) ... 39 0.030
AL136458-2|CAI21734.1| 1582|Homo sapiens InaD-like (Drosophila) ... 39 0.030
AJ224748-1|CAA12113.1| 1582|Homo sapiens Inadl protein. 39 0.030
AJ224747-1|CAA12112.1| 1552|Homo sapiens Inadl protein. 39 0.030
AJ001306-1|CAA04666.1| 1524|Homo sapiens PDZ domain protein prot... 39 0.030
AF397170-1|AAM28433.1| 1801|Homo sapiens Pals1-associated tight ... 39 0.030
U80776-1|AAC52012.1| 671|Homo sapiens unknown protein. 33 1.5
BC011635-1|AAH11635.1| 352|Homo sapiens SETMAR protein protein. 33 2.0
AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein. 33 2.0
AL953870-1|CAI41374.1| 904|Homo sapiens sarcoma antigen 1 protein. 33 2.0
AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner ... 33 2.0
AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein. 33 2.0
AJ278111-1|CAB92443.1| 904|Homo sapiens putative tumor antigen ... 31 4.6
X86810-1|CAA60500.1| 254|Homo sapiens emerin protein. 31 6.1
X82434-1|CAA57817.1| 254|Homo sapiens emerin protein. 31 6.1
L44140-2|AAA92645.1| 254|Homo sapiens emerin protein. 31 6.1
D64111-1|BAA10972.1| 254|Homo sapiens emerin protein. 31 6.1
CR536536-1|CAG38773.1| 254|Homo sapiens EMD protein. 31 6.1
BX936346-5|CAI43228.1| 254|Homo sapiens emerin (Emery-Dreifuss ... 31 6.1
BT007401-1|AAP36065.1| 254|Homo sapiens emerin (Emery-Dreifuss ... 31 6.1
BC000738-1|AAH00738.1| 254|Homo sapiens emerin (Emery-Dreifuss ... 31 6.1
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase... 31 8.0
U75308-1|AAC50901.1| 947|Homo sapiens TBP-associated factor pro... 31 8.0
BC130533-1|AAI30534.1| 527|Homo sapiens UDP glucuronosyltransfe... 31 8.0
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 31 8.0
AY542891-1|AAS48425.1| 527|Homo sapiens UDP-glucuronosyltransfe... 31 8.0
AY358727-1|AAQ89089.1| 527|Homo sapiens RSDK2559 protein. 31 8.0
AL137077-3|CAI11046.1| 949|Homo sapiens TAF4 RNA polymerase II,... 31 8.0
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 31 8.0
AL109911-3|CAI19183.1| 949|Homo sapiens TAF4 RNA polymerase II,... 31 8.0
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 31 8.0
AK025587-1|BAB15179.1| 449|Homo sapiens protein ( Homo sapiens ... 31 8.0
>BC142723-1|AAI42724.1| 1181|Homo sapiens INADL protein protein.
Length = 1181
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>BC142661-1|AAI42662.1| 1181|Homo sapiens INADL protein protein.
Length = 1181
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>AL590374-4|CAH70420.1| 1801|Homo sapiens InaD-like (Drosophila)
protein.
Length = 1801
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>AL590374-3|CAH70418.1| 1582|Homo sapiens InaD-like (Drosophila)
protein.
Length = 1582
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>AL449143-2|CAI15925.1| 1801|Homo sapiens InaD-like (Drosophila)
protein.
Length = 1801
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>AL449143-1|CAI15923.1| 1582|Homo sapiens InaD-like (Drosophila)
protein.
Length = 1582
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>AL353802-3|CAI22262.1| 1801|Homo sapiens InaD-like (Drosophila)
protein.
Length = 1801
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>AL353802-2|CAI22260.1| 1582|Homo sapiens InaD-like (Drosophila)
protein.
Length = 1582
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>AL136458-3|CAI21737.1| 1801|Homo sapiens InaD-like (Drosophila)
protein.
Length = 1801
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>AL136458-2|CAI21734.1| 1582|Homo sapiens InaD-like (Drosophila)
protein.
Length = 1582
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>AJ224748-1|CAA12113.1| 1582|Homo sapiens Inadl protein.
Length = 1582
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>AJ224747-1|CAA12112.1| 1552|Homo sapiens Inadl protein.
Length = 1552
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>AJ001306-1|CAA04666.1| 1524|Homo sapiens PDZ domain protein
protein.
Length = 1524
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>AF397170-1|AAM28433.1| 1801|Homo sapiens Pals1-associated tight
junction protein protein.
Length = 1801
Score = 38.7 bits (86), Expect = 0.030
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 308 LQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVGMLATQVAHHP 487
LQ L+ +K + + D + ++ L+M L+SP+ I TL S+ L Q+ H P
Sbjct: 13 LQVLDRLKMKLQEKGD----TSQNEKLSMFYETLKSPLFNQILTLQQSIKQLKGQLNHIP 68
Query: 488 SILPGDFDITPAG 526
S +FD + G
Sbjct: 69 SDCSANFDFSRKG 81
>U80776-1|AAC52012.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 33.1 bits (72), Expect = 1.5
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = -1
Query: 735 AKESSLRDKSNKPRLCLGDMLESTEPLSSPRICSLSDPNSILCGGETCGTLCSSSPS*FP 556
+KE K KP C + P S C + N I CG E ++C S+PS FP
Sbjct: 261 SKERLDHGKLRKPCYCGAKSCTAFLPFDSSLYCPVEKSN-ISCGNEKEPSMCGSAPSVFP 319
>BC011635-1|AAH11635.1| 352|Homo sapiens SETMAR protein protein.
Length = 352
Score = 32.7 bits (71), Expect = 2.0
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -1
Query: 732 KESSLRDKSNKPRLCLGDMLESTEPLSSPRICSLSDPNSILCGGETCGTLCSSSPS*FP 556
KE K KP C + P S C + N I CG E ++C S+PS FP
Sbjct: 262 KERLDHGKLRKPCYCGAKSCTAFLPFDSSLYCPVEKSN-ISCGNEKEPSMCGSAPSVFP 319
>AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein.
Length = 671
Score = 32.7 bits (71), Expect = 2.0
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -1
Query: 732 KESSLRDKSNKPRLCLGDMLESTEPLSSPRICSLSDPNSILCGGETCGTLCSSSPS*FP 556
KE K KP C + P S C + N I CG E ++C S+PS FP
Sbjct: 262 KERLDHGKLRKPCYCGAKSCTAFLPFDSSLYCPVEKSN-ISCGNEKEPSMCGSAPSVFP 319
>AL953870-1|CAI41374.1| 904|Homo sapiens sarcoma antigen 1 protein.
Length = 904
Score = 32.7 bits (71), Expect = 2.0
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Frame = +2
Query: 488 SILPGDFDITPAGDLALQTRNLYGN--QEGEEEQRVPQVSPPHSMEFGSDNEHILGLDSG 661
++ PG +++ AG TR+LY + +EE+ +PP SD+ ++ +
Sbjct: 694 TVPPGCINLSGAGISCRSTRDLYATVIHDIQEEEMENDQTPPDGFLSNSDSPELINMTGH 753
Query: 662 SVDSNMSPKQSRGLLDLSR---------NDDSLASTNHNVVAGDWAQVEIINLV 796
+ N S LS+ N+ ++ + N++V AGD V +++LV
Sbjct: 754 CMPPNALDSFSHDFTSLSKDELLYKPDSNEFAVGTKNYSVSAGD-PPVTVMSLV 806
>AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner
transposase fusion gene variant protein.
Length = 671
Score = 32.7 bits (71), Expect = 2.0
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -1
Query: 732 KESSLRDKSNKPRLCLGDMLESTEPLSSPRICSLSDPNSILCGGETCGTLCSSSPS*FP 556
KE K KP C + P S C + N I CG E ++C S+PS FP
Sbjct: 262 KERLDHGKLRKPCYCGAKSCTAFLPFDSSLYCPVEKSN-ISCGNEKEPSMCGSAPSVFP 319
>AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 32.7 bits (71), Expect = 2.0
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -1
Query: 732 KESSLRDKSNKPRLCLGDMLESTEPLSSPRICSLSDPNSILCGGETCGTLCSSSPS*FP 556
KE K KP C + P S C + N I CG E ++C S+PS FP
Sbjct: 262 KERLDHGKLRKPCYCGAKSCTAFLPFDSSLYCPVEKSN-ISCGNEKEPSMCGSAPSVFP 319
>AJ278111-1|CAB92443.1| 904|Homo sapiens putative tumor antigen
protein.
Length = 904
Score = 31.5 bits (68), Expect = 4.6
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Frame = +2
Query: 488 SILPGDFDITPAGDLALQTRNLYGN--QEGEEEQRVPQVSPPHSMEFGSDNEHILGLDSG 661
++ PG +++ AG TR+LY + +EE+ +PP SD+ ++ +
Sbjct: 694 TVPPGCINLSGAGISCRSTRDLYATVIHDIQEEEMENDQTPPDGFLSNSDSPELINMTGH 753
Query: 662 SVDSNMSPKQSRGLLDLSR---------NDDSLASTNHNVVAGD 766
+ N S LS+ N+ ++ + N++V AGD
Sbjct: 754 CMPPNALDSFSHDFTSLSKDELLYKPDSNEFAVGTKNYSVSAGD 797
>X86810-1|CAA60500.1| 254|Homo sapiens emerin protein.
Length = 254
Score = 31.1 bits (67), Expect = 6.1
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 518 PAGDLALQTRNLYGNQEGEEEQRVPQVSPPHSMEFGSDNEHILGLDSGSVDSNMSPKQSR 697
P G + TR LY + E E + ++SPP S S + L G D PK+
Sbjct: 22 PHGPVVGSTRRLYEKKIFEYETQRRRLSPPSSSAASSYSFSDLNSTRGDADMYDLPKKED 81
Query: 698 GLLDLSR--NDD 727
LL S+ NDD
Sbjct: 82 ALLYQSKGYNDD 93
>X82434-1|CAA57817.1| 254|Homo sapiens emerin protein.
Length = 254
Score = 31.1 bits (67), Expect = 6.1
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 518 PAGDLALQTRNLYGNQEGEEEQRVPQVSPPHSMEFGSDNEHILGLDSGSVDSNMSPKQSR 697
P G + TR LY + E E + ++SPP S S + L G D PK+
Sbjct: 22 PHGPVVGSTRRLYEKKIFEYETQRRRLSPPSSSAASSYSFSDLNSTRGDADMYDLPKKED 81
Query: 698 GLLDLSR--NDD 727
LL S+ NDD
Sbjct: 82 ALLYQSKGYNDD 93
>L44140-2|AAA92645.1| 254|Homo sapiens emerin protein.
Length = 254
Score = 31.1 bits (67), Expect = 6.1
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 518 PAGDLALQTRNLYGNQEGEEEQRVPQVSPPHSMEFGSDNEHILGLDSGSVDSNMSPKQSR 697
P G + TR LY + E E + ++SPP S S + L G D PK+
Sbjct: 22 PHGPVVGSTRRLYEKKIFEYETQRRRLSPPSSSAASSYSFSDLNSTRGDADMYDLPKKED 81
Query: 698 GLLDLSR--NDD 727
LL S+ NDD
Sbjct: 82 ALLYQSKGYNDD 93
>D64111-1|BAA10972.1| 254|Homo sapiens emerin protein.
Length = 254
Score = 31.1 bits (67), Expect = 6.1
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 518 PAGDLALQTRNLYGNQEGEEEQRVPQVSPPHSMEFGSDNEHILGLDSGSVDSNMSPKQSR 697
P G + TR LY + E E + ++SPP S S + L G D PK+
Sbjct: 22 PHGPVVGSTRRLYEKKIFEYETQRRRLSPPSSSAASSYSFSDLNSTRGDADMYDLPKKED 81
Query: 698 GLLDLSR--NDD 727
LL S+ NDD
Sbjct: 82 ALLYQSKGYNDD 93
>CR536536-1|CAG38773.1| 254|Homo sapiens EMD protein.
Length = 254
Score = 31.1 bits (67), Expect = 6.1
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 518 PAGDLALQTRNLYGNQEGEEEQRVPQVSPPHSMEFGSDNEHILGLDSGSVDSNMSPKQSR 697
P G + TR LY + E E + ++SPP S S + L G D PK+
Sbjct: 22 PHGPVVGSTRRLYEKKIFEYETQRRRLSPPSSSAASSYSFSDLNSTRGDADMYDLPKKED 81
Query: 698 GLLDLSR--NDD 727
LL S+ NDD
Sbjct: 82 ALLYQSKGYNDD 93
>BX936346-5|CAI43228.1| 254|Homo sapiens emerin (Emery-Dreifuss
muscular dystrophy) protein.
Length = 254
Score = 31.1 bits (67), Expect = 6.1
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 518 PAGDLALQTRNLYGNQEGEEEQRVPQVSPPHSMEFGSDNEHILGLDSGSVDSNMSPKQSR 697
P G + TR LY + E E + ++SPP S S + L G D PK+
Sbjct: 22 PHGPVVGSTRRLYEKKIFEYETQRRRLSPPSSSAASSYSFSDLNSTRGDADMYDLPKKED 81
Query: 698 GLLDLSR--NDD 727
LL S+ NDD
Sbjct: 82 ALLYQSKGYNDD 93
>BT007401-1|AAP36065.1| 254|Homo sapiens emerin (Emery-Dreifuss
muscular dystrophy) protein.
Length = 254
Score = 31.1 bits (67), Expect = 6.1
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 518 PAGDLALQTRNLYGNQEGEEEQRVPQVSPPHSMEFGSDNEHILGLDSGSVDSNMSPKQSR 697
P G + TR LY + E E + ++SPP S S + L G D PK+
Sbjct: 22 PHGPVVGSTRRLYEKKIFEYETQRRRLSPPSSSAASSYSFSDLNSTRGDADMYDLPKKED 81
Query: 698 GLLDLSR--NDD 727
LL S+ NDD
Sbjct: 82 ALLYQSKGYNDD 93
>BC000738-1|AAH00738.1| 254|Homo sapiens emerin (Emery-Dreifuss
muscular dystrophy) protein.
Length = 254
Score = 31.1 bits (67), Expect = 6.1
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 518 PAGDLALQTRNLYGNQEGEEEQRVPQVSPPHSMEFGSDNEHILGLDSGSVDSNMSPKQSR 697
P G + TR LY + E E + ++SPP S S + L G D PK+
Sbjct: 22 PHGPVVGSTRRLYEKKIFEYETQRRRLSPPSSSAASSYSFSDLNSTRGDADMYDLPKKED 81
Query: 698 GLLDLSR--NDD 727
LL S+ NDD
Sbjct: 82 ALLYQSKGYNDD 93
>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
transcription factor protein.
Length = 1083
Score = 30.7 bits (66), Expect = 8.0
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 875 TTX*YRLTMTPLVXAPIIPNPGQF-HHLQDL*FQLVPSPLLLRCD 744
TT R T+TP V AP +P P Q ++Q+ FQL P +L+R +
Sbjct: 417 TTSGIRATLTPTVLAPRLPQPPQNPTNIQN--FQLPPGMVLVRSE 459
>U75308-1|AAC50901.1| 947|Homo sapiens TBP-associated factor
protein.
Length = 947
Score = 30.7 bits (66), Expect = 8.0
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 875 TTX*YRLTMTPLVXAPIIPNPGQF-HHLQDL*FQLVPSPLLLRCD 744
TT R T+TP V AP +P P Q ++Q+ FQL P +L+R +
Sbjct: 281 TTSGIRATLTPTVLAPRLPQPPQNPTNIQN--FQLPPGMVLVRSE 323
>BC130533-1|AAI30534.1| 527|Homo sapiens UDP
glucuronosyltransferase 2 family, polypeptide A3
protein.
Length = 527
Score = 30.7 bits (66), Expect = 8.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 193 RIKRNKFILIYL*TFQRFDFVFWKFIFQDAFGRERLKCITAIGKCE 330
R+K + +++ Q +D+ FW+ + A GR C T +GK E
Sbjct: 208 RVKNSMLSVLFHFWIQDYDYHFWEEFYSKALGRPTTLCET-VGKAE 252
>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 30.7 bits (66), Expect = 8.0
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 875 TTX*YRLTMTPLVXAPIIPNPGQF-HHLQDL*FQLVPSPLLLRCD 744
TT R T+TP V AP +P P Q ++Q+ FQL P +L+R +
Sbjct: 419 TTSGIRATLTPTVLAPRLPQPPQNPTNIQN--FQLPPGMVLVRSE 461
>AY542891-1|AAS48425.1| 527|Homo sapiens
UDP-glucuronosyltransferase protein.
Length = 527
Score = 30.7 bits (66), Expect = 8.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 193 RIKRNKFILIYL*TFQRFDFVFWKFIFQDAFGRERLKCITAIGKCE 330
R+K + +++ Q +D+ FW+ + A GR C T +GK E
Sbjct: 208 RVKNSMLSVLFHFWIQDYDYHFWEEFYSKALGRPTTLCET-VGKAE 252
>AY358727-1|AAQ89089.1| 527|Homo sapiens RSDK2559 protein.
Length = 527
Score = 30.7 bits (66), Expect = 8.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 193 RIKRNKFILIYL*TFQRFDFVFWKFIFQDAFGRERLKCITAIGKCE 330
R+K + +++ Q +D+ FW+ + A GR C T +GK E
Sbjct: 208 RVKNSMLSVLFHFWIQDYDYHFWEEFYSKALGRPTTLCET-VGKAE 252
>AL137077-3|CAI11046.1| 949|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 949
Score = 30.7 bits (66), Expect = 8.0
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 875 TTX*YRLTMTPLVXAPIIPNPGQF-HHLQDL*FQLVPSPLLLRCD 744
TT R T+TP V AP +P P Q ++Q+ FQL P +L+R +
Sbjct: 283 TTSGIRATLTPTVLAPRLPQPPQNPTNIQN--FQLPPGMVLVRSE 325
>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 30.7 bits (66), Expect = 8.0
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 875 TTX*YRLTMTPLVXAPIIPNPGQF-HHLQDL*FQLVPSPLLLRCD 744
TT R T+TP V AP +P P Q ++Q+ FQL P +L+R +
Sbjct: 419 TTSGIRATLTPTVLAPRLPQPPQNPTNIQN--FQLPPGMVLVRSE 461
>AL109911-3|CAI19183.1| 949|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 949
Score = 30.7 bits (66), Expect = 8.0
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 875 TTX*YRLTMTPLVXAPIIPNPGQF-HHLQDL*FQLVPSPLLLRCD 744
TT R T+TP V AP +P P Q ++Q+ FQL P +L+R +
Sbjct: 283 TTSGIRATLTPTVLAPRLPQPPQNPTNIQN--FQLPPGMVLVRSE 325
>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 30.7 bits (66), Expect = 8.0
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 875 TTX*YRLTMTPLVXAPIIPNPGQF-HHLQDL*FQLVPSPLLLRCD 744
TT R T+TP V AP +P P Q ++Q+ FQL P +L+R +
Sbjct: 419 TTSGIRATLTPTVLAPRLPQPPQNPTNIQN--FQLPPGMVLVRSE 461
>AK025587-1|BAB15179.1| 449|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21934 fis, clone HEP04364. ).
Length = 449
Score = 30.7 bits (66), Expect = 8.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 193 RIKRNKFILIYL*TFQRFDFVFWKFIFQDAFGRERLKCITAIGKCE 330
R+K + +++ Q +D+ FW+ + A GR C T +GK E
Sbjct: 130 RVKNSMLSVLFHFWIQDYDYHFWEEFYSKALGRPTTLCET-VGKAE 174
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,388,869
Number of Sequences: 237096
Number of extensions: 2793720
Number of successful extensions: 5439
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 5112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5435
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12381054106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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