Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_I11
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical pr... 30 2.8
AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical ... 30 2.8
AF047662-3|AAC04443.2| 263|Caenorhabditis elegans Hypothetical ... 30 2.8
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p... 29 3.6
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z82274-9|CAB05232.2| 260|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81550-5|CAB04479.1| 881|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p... 29 3.6
Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical pr... 29 4.8
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 6.4
AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical ... 28 8.4
>Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical protein
Y48E1A.1a protein.
Length = 1737
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +2
Query: 566 EGEEEQRVPQVSPPHSMEFGSDNEHILGLDSGSVDSNMSPKQSRGLLDLSRNDDSLASTN 745
EGE+E+RV M+ S++ GLD + S + + R ++++S
Sbjct: 1452 EGEDEERVEVREEEEPMDSDSEDVKKEGLDGEDQTTEPLLVNSSRIQSVQRLSENISSYT 1511
Query: 746 HNVVAGDWAQV 778
++V + W +V
Sbjct: 1512 YDVKSNKWCEV 1522
>Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical protein
Y48E1A.1a protein.
Length = 1737
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +2
Query: 566 EGEEEQRVPQVSPPHSMEFGSDNEHILGLDSGSVDSNMSPKQSRGLLDLSRNDDSLASTN 745
EGE+E+RV M+ S++ GLD + S + + R ++++S
Sbjct: 1452 EGEDEERVEVREEEEPMDSDSEDVKKEGLDGEDQTTEPLLVNSSRIQSVQRLSENISSYT 1511
Query: 746 HNVVAGDWAQV 778
++V + W +V
Sbjct: 1512 YDVKSNKWCEV 1522
>AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +2
Query: 566 EGEEEQRVPQVSPPHSMEFGSDNEHILGLDSGSVDSNMSPKQSRGLLDLSRNDDSLASTN 745
EGE+E+RV M+ S++ GLD + S + + R ++++S
Sbjct: 1452 EGEDEERVEVREEEEPMDSDSEDVKKEGLDGEDQTTEPLLVNSSRIQSVQRLSENISSYT 1511
Query: 746 HNVVAGDWAQV 778
++V + W +V
Sbjct: 1512 YDVKSNKWCEV 1522
>AF047662-3|AAC04443.2| 263|Caenorhabditis elegans Hypothetical
protein T22B2.5 protein.
Length = 263
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +2
Query: 461 LATQVAHHPSILPGDFDITPAGDLALQTRNLYGNQEGEEEQRVPQVSPPHSMEFGSDNEH 640
L + ++L D P G+LA Q+ L G EE V P S F +EH
Sbjct: 160 LVASACYSANVL-NDLKSLPIGELAKQSTILCSELRGTEEMESVMVEPRRSSIFDDSSEH 218
>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 560 NQEGEEEQRVPQVSPPHSMEFG--SDNEHILGLDSGSVDSNMSPKQSRGLLDLSRNDDSL 733
N+ GE + V V PH +E G D+E++L L S S + P ++ L L
Sbjct: 307 NEHGEAVRTVKNVISPH-VELGLDPDSEYVLTLQSHSANGTSLPSTAKLFSTLPTTRPPL 365
Query: 734 ASTNHNVVAGDWAQVEIINLVN 799
+ + D +V I + VN
Sbjct: 366 CTIGEPIYMND-GRVMICDAVN 386
>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical
protein T04A11.3 protein.
Length = 1014
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 560 NQEGEEEQRVPQVSPPHSMEFG--SDNEHILGLDSGSVDSNMSPKQSRGLLDLSRNDDSL 733
N+ GE + V V PH +E G D+E++L L S S + P ++ L L
Sbjct: 128 NEHGEAVRTVKNVISPH-VELGLDPDSEYVLTLQSHSANGTSLPSTAKLFSTLPTTRPPL 186
Query: 734 ASTNHNVVAGDWAQVEIINLVN 799
+ + D +V I + VN
Sbjct: 187 CTIGEPIYMND-GRVMICDAVN 207
>Z82274-9|CAB05232.2| 260|Caenorhabditis elegans Hypothetical
protein JC8.5 protein.
Length = 260
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 277 LER*ISRKQNRTFEKFRGKSR*TYFVLYVVQLKVGLTFSLI 155
+ R S+K NR +K TY+V+ +V + +G TF+ I
Sbjct: 40 IARGFSKKPNRVVDKSADTRNYTYYVMSLVIVAIGCTFAAI 80
>Z81550-5|CAB04479.1| 881|Caenorhabditis elegans Hypothetical
protein F55F3.4 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -3
Query: 535 CQVTSRSNIKISR*N*WVMCNLSCKHAHRVMK---CSNTS*YG 416
CQ TS S+ KI + MC + + +MK CSNT+ YG
Sbjct: 619 CQSTSSSDFKIRVNGTYTMCLQDVEKLYNLMKSASCSNTAEYG 661
>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 560 NQEGEEEQRVPQVSPPHSMEFG--SDNEHILGLDSGSVDSNMSPKQSRGLLDLSRNDDSL 733
N+ GE + V V PH +E G D+E++L L S S + P ++ L L
Sbjct: 307 NEHGEAVRTVKNVISPH-VELGLDPDSEYVLTLQSHSANGTSLPSTAKLFSTLPTTRPPL 365
Query: 734 ASTNHNVVAGDWAQVEIINLVN 799
+ + D +V I + VN
Sbjct: 366 CTIGEPIYMND-GRVMICDAVN 386
>Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical
protein C17E4.1 protein.
Length = 425
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 849 DTTCXSTYNTKSRPVPSFTRFIISTCAQ-SPATTL*LVDAKESSLRDKSNKPRLC-LGDM 676
DT+ +T T P P+F+ +I CA+ L + +KE S D+ N C GD
Sbjct: 266 DTSTTTTTTTDDEPEPNFSEEMIIMCARVLEVVKLESLISKEISKPDQINLRAFCRCGDH 325
Query: 675 LESTE 661
E+ E
Sbjct: 326 EENAE 330
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 629 DNEHILGLDSGSVDSNMSPKQSRG 700
DN HI G D GS ++ KQ+RG
Sbjct: 3525 DNSHIFGKDEGSGHHTLTIKQARG 3548
>AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical
protein Y6B3B.3 protein.
Length = 995
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 341 DQSNDPKLKAATSDDLNMLISLLES--PILRSITTLHDSVGMLATQVA 478
D S +KAAT DD+ L +LL + I S +TL + ML T+ +
Sbjct: 101 DNSQAIYIKAATDDDIKGLDNLLSTIKTIPNSNSTLFSDIKMLTTETS 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,267,624
Number of Sequences: 27780
Number of extensions: 433704
Number of successful extensions: 1076
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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