Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_I08
         (902 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical pr...    69   6e-12
AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical ...    68   1e-11
AF039050-11|AAC47941.1|  333|Caenorhabditis elegans Seven tm rec...    31   0.85 
Z81130-7|CAE17967.1|  199|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U70856-1|AAB09165.1|  327|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p...    29   4.5  

>Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical
           protein F59F4.2 protein.
          Length = 65

 Score = 68.5 bits (160), Expect = 6e-12
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = +2

Query: 191 SKNITMRGXVPKTTKEKEXQYPVAPWLLALFIFVVCGSAVFQIIQSIRL 337
           SKN+  RG V K+ K  E +YP APWL+ LF+FVVCGSAVF+II+ +++
Sbjct: 15  SKNVNNRGNVAKSLKPAEDKYPAAPWLIGLFVFVVCGSAVFEIIRYVKM 63


>AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical
           protein T09A12.5 protein.
          Length = 63

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 27/49 (55%), Positives = 38/49 (77%)
 Frame = +2

Query: 191 SKNITMRGXVPKTTKEKEXQYPVAPWLLALFIFVVCGSAVFQIIQSIRL 337
           SKN+T RG VPK  K  E ++P + WL+ LFIFVVCGSA+F++I+ I++
Sbjct: 15  SKNVTQRGNVPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFEVIRYIKV 63


>AF039050-11|AAC47941.1|  333|Caenorhabditis elegans Seven tm
           receptor protein 83 protein.
          Length = 333

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = -3

Query: 414 LNFRWIVLLFYCVFDSSSPVVFVI*ASLIDWIIWNTAEPHTTKMKRARSQGA---TGYWX 244
           LN+  I ++ Y +F +S P++  +   +  W+   +A   T K K  + Q     T    
Sbjct: 197 LNYLNIAMIIYLIFCASIPMIISLVCGIKTWLQIRSAIDITDKSKTLQKQERQLFTALLI 256

Query: 243 SFSLVVLG-TXPLIVMF 196
            F +  LG T P++++F
Sbjct: 257 QFIIPFLGNTVPMLILF 273


>Z81130-7|CAE17967.1|  199|Caenorhabditis elegans Hypothetical
           protein T23G11.10 protein.
          Length = 199

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 162 AHAXRQRVSPVKTSQ*GGMYPKLLRKKKXNILWHP 266
           A   ++R  PVKT + GG++PK    K  ++ W P
Sbjct: 135 AEIAKERFGPVKTLKMGGVFPK---NKANSVFWSP 166


>U70856-1|AAB09165.1|  327|Caenorhabditis elegans Hypothetical
           protein F57F4.2 protein.
          Length = 327

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = -1

Query: 668 IHYI-LMEFVA*VVFKNYIEKETKIHRKFYNRYLNVPNNLMYRR-PVLTPVSVKETSSHD 495
           +HYI +++FV   +F++YI+   K     YN YL +     +R   +++  +  +TS  D
Sbjct: 256 MHYIKILKFVLIAIFQSYIQFLKKTKYILYNCYLTILTFKNFREFEIVSSYTTIQTSKID 315

Query: 494 C-TVKGTNGRLR 462
             T K   G+ R
Sbjct: 316 SKTFKKLLGKFR 327


>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
           protein F40G12.3 protein.
          Length = 1099

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +1

Query: 304 CCVPD--NPINKTSLNHEDNWRTA 369
           CC P+  N +N  S+ H  NWRTA
Sbjct: 136 CCFPEVVNYLNTHSVGHVKNWRTA 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,994,514
Number of Sequences: 27780
Number of extensions: 290896
Number of successful extensions: 635
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)