Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_I07
         (935 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal ...    47   9e-07
AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal ...    27   0.82 
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   5.8  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   7.6  

>AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal
           carrier protein TOL-2 protein.
          Length = 248

 Score = 46.8 bits (106), Expect = 9e-07
 Identities = 42/193 (21%), Positives = 80/193 (41%), Gaps = 10/193 (5%)
 Frame = +2

Query: 86  LVFLFACAFVA-SDATDLAKFITPCRPKDTACLKSSAQKAVPFLAAGIADLGIETMDPMT 262
           ++F+     VA      L    + C+  D  C+  +          G+  LG+ ++DP+ 
Sbjct: 5   VIFVLLAGLVALGSGIKLPASYSQCKTGDEPCVVQAITNTFQKFQGGVPALGLASLDPLR 64

Query: 263 VGRVNTVQA----GLHMDFR--DTTXXXXXXXXXXXXXXXYDKTL-LDLKCSV-TLVGEY 418
           +  ++ VQ      + ++F+  D T                   + ++L+  V +LVG Y
Sbjct: 65  IDEMDIVQGTGPVNIVLNFKNVDITGFKDVAVKKAKGFTETPNVMEMNLRLPVASLVGSY 124

Query: 419 TLGGQLLILPIEGTGKYXXXXXXXXXXXXLD-VEERIVEGDRYWHVSDWKHSAEDVSKVE 595
            + G++LILPI+G G               +   E+   G  Y+ ++  K +  D ++  
Sbjct: 125 KIKGKVLILPIQGEGTSNMTMVNCDFLMKWNGALEKRANGKEYYQMNKIK-ATFDTTRFY 183

Query: 596 YQFQNLFNGNRDL 634
               NLFNG++ L
Sbjct: 184 MHLTNLFNGDKAL 196


>AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal
           carrier protein TOL-1 protein.
          Length = 272

 Score = 27.1 bits (57), Expect = 0.82
 Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 14/141 (9%)
 Frame = +2

Query: 86  LVFLFACAFVASDATDLAK--FITPCR---PKDTACLKSSAQKAVPFLAAGIADLG-IET 247
           +V L A +  A+ A+   K  FI  CR   P    C   S Q     L  GI  L  + T
Sbjct: 21  VVSLLALSLPAASASFETKPEFIKTCRFDQPDFVDCSTESVQGLFDKLVTGIEGLEHVGT 80

Query: 248 MDPMTVGRVNTVQAGLHMDFRD-------TTXXXXXXXXXXXXXXXYD-KTLLDLKCSVT 403
           +DPM + ++  +Q    +           T                +  +T + L   + 
Sbjct: 81  IDPMKISKIRILQGDGPVSVNASLSKVVVTGFASTKVLRNVVSSKNFGWETHIRLP-KMR 139

Query: 404 LVGEYTLGGQLLILPIEGTGK 466
           L G Y + G++L++P+ G GK
Sbjct: 140 LEGNYHMQGRILVIPLNGHGK 160


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 71  YXVGSLVFLFACAFVASDATDLAKFITPCRPKDTACL 181
           + +G+ + +     VA DA+ L  +IT    ++ ACL
Sbjct: 610 FWIGTWISIILVVLVAVDASALVCYITRFTEENFACL 646


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -3

Query: 339  QFLRPLTVVSLKSMCKPAWTVFTRPTVIGSMVSIPRSAI 223
            +F+  L     K+    AW VF    V+GS + I  S +
Sbjct: 1221 EFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEV 1259


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,875
Number of Sequences: 2352
Number of extensions: 11267
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102122397
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)