Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_I04
(930 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21324-13|AAA62558.1| 357|Caenorhabditis elegans Hypothetical p... 132 3e-31
Z68298-3|CAA92600.2| 357|Caenorhabditis elegans Hypothetical pr... 128 7e-30
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 37 0.024
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 37 0.024
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 37 0.024
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 37 0.024
U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily ass... 35 0.072
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 34 0.13
U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protei... 33 0.22
U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protei... 33 0.22
U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protei... 33 0.22
U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protei... 33 0.22
Z36282-4|CAI06055.2| 801|Caenorhabditis elegans Hypothetical pr... 32 0.67
Z31590-10|CAA83466.3| 801|Caenorhabditis elegans Hypothetical p... 32 0.67
DQ104391-1|AAZ08414.1| 801|Caenorhabditis elegans CNK-1 protein. 32 0.67
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 31 1.6
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 31 1.6
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 31 1.6
Z66511-1|CAA91314.1| 537|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81509-6|CAB04153.2| 431|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z78014-2|CAB01429.1| 122|Caenorhabditis elegans Hypothetical pr... 29 4.7
>U21324-13|AAA62558.1| 357|Caenorhabditis elegans Hypothetical
protein C35D10.2 protein.
Length = 357
Score = 132 bits (320), Expect = 3e-31
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Frame = +1
Query: 385 EDTESQSNGVDNSNGTQKSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 564
E++ S V N QL F CQ AHGSP+G+I ++N++ELY+ IA+C+ S +DI
Sbjct: 43 EESSSTIMTVVNPLMVAARQLKFACQMAHGSPVGIIDKWNNMEELYQSIADCFTISKDDI 102
Query: 565 LFCTLNTHKVDMKKLLGGQIGLEDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFI 744
+F T+N K DMK + G + +D +FAH +G+ E+ +VK G+TITDNG G AFI
Sbjct: 103 IFLTVNDFKPDMKNMFTGTLNFKDMLFAHIRGQATELRVVKDAKNFGVTITDNGLGNAFI 162
Query: 745 KRIKEGSIVSRI-PHIEVXDHIEKLNGENMVGEK 843
K I S+ R+ P +V IE +NGE ++G++
Sbjct: 163 KVISPDSVFDRMRPATQVGQLIEAVNGECVLGKR 196
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 833 LGKRHYXVAKILKEIPKG 886
LGKRHY VA+ILK + +G
Sbjct: 193 LGKRHYQVARILKNVRRG 210
>Z68298-3|CAA92600.2| 357|Caenorhabditis elegans Hypothetical
protein F44D12.4 protein.
Length = 357
Score = 128 bits (308), Expect = 7e-30
Identities = 61/154 (39%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Frame = +1
Query: 385 EDTESQSNGVDNSNGTQKSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 564
E+ S V N +L F CQ AHGSP+ +I +++++ELY+ IA+ + S +DI
Sbjct: 43 EEPSSSIMPVVNPLMVAAKELKFPCQLAHGSPVAIIDKWNDMEELYQSIADFFAISKDDI 102
Query: 565 LFCTLNTHKVDMKKLLGGQIGLEDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFI 744
+F T+N K DMK + G + +D +FAH +G+ E+ +VK + G+T+TDNG G AFI
Sbjct: 103 IFLTVNDFKPDMKNMFSGTLNFKDMLFAHVRGQATELRMVKDANVFGVTVTDNGLGNAFI 162
Query: 745 KRIKEGSIVSRI-PHIEVXDHIEKLNGENMVGEK 843
K I GS+ R+ P +V IE +NGE+++G++
Sbjct: 163 KVISPGSVFDRMRPATQVGQLIEAINGESVLGKR 196
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 833 LGKRHYXVAKILKEIPKG 886
LGKRHY VA++LK I +G
Sbjct: 193 LGKRHYQVARMLKSIRRG 210
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 36.7 bits (81), Expect = 0.024
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 688 TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVXDHIEKLNG 822
T++ +G+T+ N G F+ RI G ++ R + V D I ++NG
Sbjct: 212 TQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREING 256
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical
protein F17E5.1a protein.
Length = 961
Score = 36.7 bits (81), Expect = 0.024
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 688 TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVXDHIEKLNG 822
T++ +G+T+ N G F+ RI G ++ R + V D I ++NG
Sbjct: 553 TQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREING 597
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 36.7 bits (81), Expect = 0.024
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 688 TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVXDHIEKLNG 822
T++ +G+T+ N G F+ RI G ++ R + V D I ++NG
Sbjct: 212 TQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREING 256
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 36.7 bits (81), Expect = 0.024
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 688 TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVXDHIEKLNG 822
T++ +G+T+ N G F+ RI G ++ R + V D I ++NG
Sbjct: 553 TQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREING 597
>U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily
assigned gene nameprotein 117 protein.
Length = 668
Score = 35.1 bits (77), Expect = 0.072
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 667 KEIEIVKTEDA-LGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVXDHIEKLNGENMVGEK 843
K +E+VK ED+ LG T+ N + R+ +G IV ++ + D + +LNG ++ G++
Sbjct: 234 KVVEVVKDEDSYLGATVR-NENNKIIVGRVVKGGIVEKMNLFQEGDELLELNGSSLKGKQ 292
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 34.3 bits (75), Expect = 0.13
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 640 IFAHRKGRP-KEIEIVKTEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVXDHIEKL 816
++A K R EI+I K + G TI DN G +RIK+ S+ P++ D I +L
Sbjct: 564 VYAAAKSRDLHEIDIFKGSEGFGFTIADNLNG----QRIKKILFPSQCPNLMEGDTIVEL 619
Query: 817 NGENM 831
+G N+
Sbjct: 620 DGRNV 624
>U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protein
1, isoform e protein.
Length = 527
Score = 33.5 bits (73), Expect = 0.22
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +1
Query: 670 EIEIVKTEDALGLTITDNGAGY--------AFIKRIKEGSIVSRIPHIEVXDHIEKLNGE 825
E+++ K + LG++I G G F+K I G V R I V D I ++G+
Sbjct: 68 EVDLEKGAEGLGVSIIGMGVGADSGLEKLGIFVKSITPGGAVHRDGRIRVCDQIVSVDGK 127
Query: 826 NMVGEKTLXXGKNSERNT 879
++VG L N+ R+T
Sbjct: 128 SLVGVSQL-YAANTLRST 144
>U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protein
1, isoform b protein.
Length = 561
Score = 33.5 bits (73), Expect = 0.22
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +1
Query: 670 EIEIVKTEDALGLTITDNGAGY--------AFIKRIKEGSIVSRIPHIEVXDHIEKLNGE 825
E+++ K + LG++I G G F+K I G V R I V D I ++G+
Sbjct: 102 EVDLEKGAEGLGVSIIGMGVGADSGLEKLGIFVKSITPGGAVHRDGRIRVCDQIVSVDGK 161
Query: 826 NMVGEKTLXXGKNSERNT 879
++VG L N+ R+T
Sbjct: 162 SLVGVSQL-YAANTLRST 178
>U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protein
1, isoform d protein.
Length = 658
Score = 33.5 bits (73), Expect = 0.22
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +1
Query: 670 EIEIVKTEDALGLTITDNGAGY--------AFIKRIKEGSIVSRIPHIEVXDHIEKLNGE 825
E+++ K + LG++I G G F+K I G V R I V D I ++G+
Sbjct: 199 EVDLEKGAEGLGVSIIGMGVGADSGLEKLGIFVKSITPGGAVHRDGRIRVCDQIVSVDGK 258
Query: 826 NMVGEKTLXXGKNSERNT 879
++VG L N+ R+T
Sbjct: 259 SLVGVSQL-YAANTLRST 275
>U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protein
1, isoform a protein.
Length = 721
Score = 33.5 bits (73), Expect = 0.22
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +1
Query: 670 EIEIVKTEDALGLTITDNGAGY--------AFIKRIKEGSIVSRIPHIEVXDHIEKLNGE 825
E+++ K + LG++I G G F+K I G V R I V D I ++G+
Sbjct: 262 EVDLEKGAEGLGVSIIGMGVGADSGLEKLGIFVKSITPGGAVHRDGRIRVCDQIVSVDGK 321
Query: 826 NMVGEKTLXXGKNSERNT 879
++VG L N+ R+T
Sbjct: 322 SLVGVSQL-YAANTLRST 338
>Z36282-4|CAI06055.2| 801|Caenorhabditis elegans Hypothetical
protein R01H10.8 protein.
Length = 801
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 703 GLTITDNGAGYAFIKRIKEGSIVSRIPHIEVXDHIEKLNGENMVG 837
GL I + G I IKEGS I+ D I +NG +VG
Sbjct: 275 GLNIQSSYRGVHVISEIKEGSPADACTKIDAGDEILMINGRTVVG 319
>Z31590-10|CAA83466.3| 801|Caenorhabditis elegans Hypothetical
protein R01H10.8 protein.
Length = 801
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 703 GLTITDNGAGYAFIKRIKEGSIVSRIPHIEVXDHIEKLNGENMVG 837
GL I + G I IKEGS I+ D I +NG +VG
Sbjct: 275 GLNIQSSYRGVHVISEIKEGSPADACTKIDAGDEILMINGRTVVG 319
>DQ104391-1|AAZ08414.1| 801|Caenorhabditis elegans CNK-1 protein.
Length = 801
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 703 GLTITDNGAGYAFIKRIKEGSIVSRIPHIEVXDHIEKLNGENMVG 837
GL I + G I IKEGS I+ D I +NG +VG
Sbjct: 275 GLNIQSSYRGVHVISEIKEGSPADACTKIDAGDEILMINGRTVVG 319
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 715 TDNGAGYAFIKRIKEGSIVSRIPHIEVXDHIEKLNGENM 831
TD G AFI ++K GS+ I + D + + NG+++
Sbjct: 668 TDTGKLGAFITQVKPGSVADTIGRLRPGDEVVEWNGQSL 706
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 715 TDNGAGYAFIKRIKEGSIVSRIPHIEVXDHIEKLNGENM 831
TD G AFI ++K GS+ I + D + + NG+++
Sbjct: 668 TDTGKLGAFITQVKPGSVADTIGRLRPGDEVVEWNGQSL 706
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 715 TDNGAGYAFIKRIKEGSIVSRIPHIEVXDHIEKLNGENM 831
TD G AFI ++K GS+ I + D + + NG+++
Sbjct: 668 TDTGKLGAFITQVKPGSVADTIGRLRPGDEVVEWNGQSL 706
>Z66511-1|CAA91314.1| 537|Caenorhabditis elegans Hypothetical
protein F07A11.1 protein.
Length = 537
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 577 LNTHKVDMKKLLGGQIGLEDFIFAHRKGRPKEIEIVKTEDA 699
+N ++MKK LE++IF H R +++E+ +DA
Sbjct: 252 VNAEMIEMKKRRPKSPVLENYIFRHESPRSRDVEVRTRKDA 292
>Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical
protein F21A3.2b protein.
Length = 544
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -3
Query: 874 FFQNFCHXIMSFPQPYSHHSI-SQYDLXP-QYVVF 776
++ NF H + F P S H++ YD+ P +VVF
Sbjct: 271 YYNNFTHYVNRFTMPNSEHNLFYSYDVGPVHFVVF 305
>Z81509-6|CAB04153.2| 431|Caenorhabditis elegans Hypothetical
protein F21A3.2a protein.
Length = 431
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -3
Query: 874 FFQNFCHXIMSFPQPYSHHSI-SQYDLXP-QYVVF 776
++ NF H + F P S H++ YD+ P +VVF
Sbjct: 158 YYNNFTHYVNRFTMPNSEHNLFYSYDVGPVHFVVF 192
>Z78014-2|CAB01429.1| 122|Caenorhabditis elegans Hypothetical
protein F42E8.2 protein.
Length = 122
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 478 PLGLISGFSNVKELYEKIAECYEFSPEDILFCTLNTHKVDMKKLLG--GQIGLEDFIFAH 651
PL ++ GF E K C E I+F + N ++ + + G G +D +
Sbjct: 14 PLSIVKGFIRKYEDELKGFPCENVCAEKIIFKSFNNNEYRIAPVFGFVDPSGSKDVVITR 73
Query: 652 RKGRPKEIEIV 684
G PK+ ++V
Sbjct: 74 TAGAPKDDKLV 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,940,313
Number of Sequences: 27780
Number of extensions: 409571
Number of successful extensions: 937
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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