Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_I02
         (963 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    33   0.017
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.16 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    29   0.28 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.85 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.85 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          27   1.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   2.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.5  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 32.7 bits (71), Expect = 0.017
 Identities = 26/95 (27%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
 Frame = +1

Query: 535 PXKPPXXPGXXPGGPXGHQXXPXXGEXXPXXXGXGGXAPXPLXXPPXPLYXXKP--XXXX 708
           P +P   PG  PG   G Q  P   +        G   P P+  PP P+   +P      
Sbjct: 227 PMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMG--QPPPI-RPPNPMGGPRPQISPQN 283

Query: 709 GXXXXXTPPXXPPPXKXPPXXPPGGXTGXPPAXFR 813
                  P     P + PP    GG  G PP   R
Sbjct: 284 SNLSGGMPSGMVGPPR-PPMPMQGGAPGGPPQGMR 317



 Score = 25.8 bits (54), Expect = 2.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 520 GXXGPPXKPPXXPGXXPGGP 579
           G  GPP  P    G  PGGP
Sbjct: 293 GMVGPPRPPMPMQGGAPGGP 312


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.5 bits (63), Expect = 0.16
 Identities = 30/122 (24%), Positives = 32/122 (26%)
 Frame = +1

Query: 529 GPPXKPPXXPGXXPGGPXGHQXXPXXGEXXPXXXGXGGXAPXPLXXPPXPLYXXKPXXXX 708
           GPP           GGP G    P  G             P PL     P +   P    
Sbjct: 511 GPPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPPQ--FLPPPLNLLRAPFFPLNPAQLR 568

Query: 709 GXXXXXTPPXXPPPXKXPPXXPPGGXTGXPPAXFRGXPPXPXPXXPPPXXPXXXXXXGXX 888
                   P   PP    P  PP    G PP+   G  P   P    P  P      G  
Sbjct: 569 FPAGFPNLPNAQPP----PAPPPPPPMGPPPSPLAGG-PLGGPAGSRPPLPNLLGFGGAA 623

Query: 889 XP 894
            P
Sbjct: 624 PP 625


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 28.7 bits (61), Expect = 0.28
 Identities = 16/43 (37%), Positives = 16/43 (37%)
 Frame = -2

Query: 860 GXXGGGXXGXGXGGXPRKXAGGXPVXPPGGXXGGFXXGGGXXG 732
           G  GGG  G G GG       G      GG  G    GGG  G
Sbjct: 651 GSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIG 693


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 0.85
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = -2

Query: 848 GGXXGXGXGGXPRKXAGGXPVXPPGGXXGGFXXGGGXXGGV 726
           GG  G G  G   + AG   V    G  GG   GG   GGV
Sbjct: 535 GGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGGV 575



 Score = 27.1 bits (57), Expect = 0.85
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = -2

Query: 845 GXXGXGXGGXPRKXAGGXPVXPPGGXXGGFXXGGG 741
           G  G G GG  R  +GG      GG   G   GGG
Sbjct: 838 GAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGGG 872



 Score = 25.0 bits (52), Expect = 3.4
 Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 11/55 (20%)
 Frame = -2

Query: 860 GXXGGGXXGXGXGGX-----PRKXAG------GXPVXPPGGXXGGFXXGGGXXGG 729
           G  GGG  G   GG      P    G      G P+    G  GG   GGG  GG
Sbjct: 813 GNGGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGG 867



 Score = 24.2 bits (50), Expect = 6.0
 Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
 Frame = -2

Query: 902 AXGGXXXPXFXXXX-GXXGGGXXGXGXGGXPRKXAGG 795
           A GG   P +     G  G G  G G GG   +  GG
Sbjct: 538 AGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGG 574


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.1 bits (57), Expect = 0.85
 Identities = 31/112 (27%), Positives = 33/112 (29%), Gaps = 1/112 (0%)
 Frame = -2

Query: 788 VXPPGGXXG-GFXXGGGXXGGVXXXXXPXXXXGXXXYRGXGGXXRGXGAXPPXPXXXGXX 612
           V PPG     G     G  GG+     P    G   Y G  G   G    P  P   G  
Sbjct: 103 VGPPGPKGNPGLRGPKGERGGMGDRGDPGLP-GSLGYPGEKGDL-GTPGPPGYPGDVG-- 158

Query: 611 SPXXGXFWWPXGPPGXXPGXXGGXXGGPXXPPXXGXNPXPPXXAXXGRPGXV 456
                    P G PG  P    G  G P  P   G    P      G PG +
Sbjct: 159 ---------PKGEPG--PKGPAGHPGAPGRPGVDGVKGLPGLKGDIGAPGVI 199


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 791 PVXPPGGXXGGFXXGGGXXGGV 726
           PV P G   GG   GGG  GGV
Sbjct: 540 PVGPAGVGGGGGGGGGGGGGGV 561


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = -2

Query: 578 GPPGXXPGXXGGXXGGPXXPPXXGXNPXPPXXAXXGRP 465
           G PG  P   G    GP  PP  G  P P      G P
Sbjct: 94  GMPGAPPLLMG--PNGPLPPPMMGMRPPPMMVPTMGMP 129


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
 Frame = -2

Query: 860 GXXGGGXXGXGXGGXP---RKXAGGXPVXPPGGXXGGFXXGGGXXGG 729
           G  GGG  G G G      R  A    V       GG   GGG  GG
Sbjct: 168 GGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGG 214



 Score = 24.6 bits (51), Expect = 4.5
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = -2

Query: 836 GXGXGGXPRKXAGGXPVXPPGGXXGGFXXGGGXXGG 729
           G G GG     +GG      GG  GG   GGG  GG
Sbjct: 201 GAGGGG-----SGGGAPGGGGGSSGGPGPGGGGGGG 231



 Score = 24.2 bits (50), Expect = 6.0
 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
 Frame = -2

Query: 845 GXXGXGXGGXPRKXAGGXPVXP-PGGXXGG 759
           G  G G GG      GG    P PGG  GG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,226
Number of Sequences: 2352
Number of extensions: 10379
Number of successful extensions: 71
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105843456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)