Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_H22
         (942 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0410 - 17347853-17347978,17348289-17348399,17348481-173488...    31   1.0  
01_05_0790 + 25253363-25254136,25259037-25259897                       31   1.3  
10_02_0015 + 4243218-4243420,4243553-4243745,4243818-4243898,424...    30   2.3  
11_04_0336 - 16507661-16507753,16508061-16508158,16508311-165086...    29   5.4  
12_01_0019 - 135627-135983,136564-136797,137118-137196,137268-13...    28   9.4  
08_02_1108 - 24360289-24360414,24360725-24360822,24361129-243612...    28   9.4  
08_01_0231 + 1851689-1851733,1851854-1852139,1852777-1853444           28   9.4  

>11_04_0410 -
           17347853-17347978,17348289-17348399,17348481-17348840,
           17348913-17349105,17349239-17349279
          Length = 276

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 30  GILKI*DLRDPALSFKTYRALAEKGLKSVADRVLKE 137
           G + + + R PAL+++ Y+    + + S ADRVLKE
Sbjct: 41  GAIGLPEFRTPALTWRDYKRSTNERIMSPADRVLKE 76


>01_05_0790 + 25253363-25254136,25259037-25259897
          Length = 544

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
 Frame = +3

Query: 60  PALSFKTYRALAEKGLKSVADRVLKERSRSHITPDNVWAGVLKYGAPSTPRTKDPYYLEC 239
           PA+++   R L+E        R+ ++R R   T   +         P     ++PY L  
Sbjct: 379 PAVTYSLSR-LSEVIAPIKTVRLTRDRERDAETMSRLLEHGDLAVCPEGTTCREPYLLR- 436

Query: 240 LSELKAEMSCILEPLKLDEAVKAIPGSTSPGFPFIRT---HPGKKKEYIINNYLPKFNNY 410
            S L AE++  +EP+ LD  V  + G+T+ G  ++         +  Y + ++L      
Sbjct: 437 FSPLFAELADDMEPVALDAQVTTLYGTTASGHKWLDPVVFFANPQPAYRV-DFLGAVPRE 495

Query: 411 WTRVG 425
           WTR G
Sbjct: 496 WTRAG 500


>10_02_0015 +
           4243218-4243420,4243553-4243745,4243818-4243898,
           4244267-4244377,4244921-4245211,4245301-4245363,
           4245571-4245636,4245761-4245979
          Length = 408

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 30  GILKI*DLRDPALSFKTYRALAEKGLKSVADRVLKE 137
           G   + + R PAL+++ Y+    + + S ADRVLKE
Sbjct: 95  GAFGLVECRTPALTWRDYKRSTNERIMSPADRVLKE 130


>11_04_0336 -
           16507661-16507753,16508061-16508158,16508311-16508626,
           16508699-16508891,16508990-16509030
          Length = 246

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 30  GILKI*DLRDPALSFKTYRALAEKGLKSVADRVLK 134
           G + + + R PAL+++ Y+    + + S ADRVLK
Sbjct: 41  GAIGLPECRTPALTWRDYKRSTNERMMSPADRVLK 75


>12_01_0019 -
           135627-135983,136564-136797,137118-137196,137268-137383,
           137847-137991,138177-138594,138644-138649,139315-139945
          Length = 661

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 273 LEPLKLDEAVKAIPGSTSPGFPFIRTHPGKKKEYIINNY 389
           L  L L E +  +P   +   P   THP KKK + ++++
Sbjct: 165 LSTLSLTELIDLVPHLVARSLPSPDTHPDKKKLFSVHHF 203


>08_02_1108 -
           24360289-24360414,24360725-24360822,24361129-24361291,
           24361364-24361556,24361690-24361730
          Length = 206

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 48  DLRDPALSFKTYRALAEKGLKSVADRVLKE 137
           + R PAL+++ Y+    + + S A+RVLKE
Sbjct: 47  EFRTPALTWRDYKRSTNERIMSPANRVLKE 76


>08_01_0231 + 1851689-1851733,1851854-1852139,1852777-1853444
          Length = 332

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +3

Query: 207 PRTKDPYYLECLSELKAEMSCILE--PLKLDEAVKAIPGSTSPGFPFIRTHPGK 362
           P+  D +YL+ L +L    + +++  P +L+E +KA   STS G    +   GK
Sbjct: 16  PKPSDDFYLD-LGDLPKSYANLMKDIPRRLEEIIKAEAPSTSKGKKLFKKISGK 68


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,483,109
Number of Sequences: 37544
Number of extensions: 404210
Number of successful extensions: 1017
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)