Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_H20
         (947 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         29   4.1  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   4.1  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   5.4  
11_01_0385 + 2915532-2916482                                           28   9.4  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    28   9.4  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 22/92 (23%), Positives = 25/92 (27%), Gaps = 1/92 (1%)
 Frame = +1

Query: 631  PKNPXEXXXPPPPXKXXXPXPPXXXXXXGTXXXPXPXLXPLKMXSPPFXGGXXKNPXXFS 810
            P  P     PPPP K   P  P           P P   P+ +  PP        P    
Sbjct: 1232 PPPPAPVISPPPPEKSPPPAAPVILSPPAVKSLPPP--APVSLPPPPVKSLPPPAPVSLP 1289

Query: 811  PXXXKT-XXXXXXXXTPXXXXPLXXXGPXXKP 903
            P   K+          P    PL    P   P
Sbjct: 1290 PPVVKSLPPPAPVSLPPPAVKPLPPPAPVSLP 1321


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/47 (34%), Positives = 16/47 (34%)
 Frame = +1

Query: 631 PKNPXEXXXPPPPXKXXXPXPPXXXXXXGTXXXPXPXLXPLKMXSPP 771
           PK       PPPP K   P PP             P   P K  SPP
Sbjct: 319 PKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPP 365


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 14/47 (29%), Positives = 17/47 (36%)
 Frame = +1

Query: 631  PKNPXEXXXPPPPXKXXXPXPPXXXXXXGTXXXPXPXLXPLKMXSPP 771
            P +P     PPPP       PP       +   P P   PL +  PP
Sbjct: 1161 PPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPP 1207


>11_01_0385 + 2915532-2916482
          Length = 316

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/50 (30%), Positives = 16/50 (32%)
 Frame = +3

Query: 663 PPXXXXXPKXPPXXXNXGXXXXPXPXFKXPKNVFXPLPGGEXKKPXXFFP 812
           PP         P   + G    P P F  P     P PGG    P   FP
Sbjct: 180 PPLPPFNQPPTPEWPHPGNKWPPLPPFHPPPTPAWPHPGGNKWPPLPPFP 229


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/47 (31%), Positives = 17/47 (36%)
 Frame = +1

Query: 631 PKNPXEXXXPPPPXKXXXPXPPXXXXXXGTXXXPXPXLXPLKMXSPP 771
           P  P +   PPPP     P PP       +   P P   P    SPP
Sbjct: 74  PGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPP---PSPP 117


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,546,048
Number of Sequences: 37544
Number of extensions: 249724
Number of successful extensions: 852
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)