Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_H19
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006662-3|AAF39895.1|  368|Caenorhabditis elegans Hypothetical ...    31   0.84 
Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>AC006662-3|AAF39895.1|  368|Caenorhabditis elegans Hypothetical
           protein H23L24.4 protein.
          Length = 368

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 171 IWLLARSKFLIPNILF*YNYSSKCSLKFFYVKL 73
           +W    SK+L+PN +F Y  SS C+  + +V L
Sbjct: 35  LWDRTYSKYLLPNSIFLYKRSSTCTRTYIFVIL 67


>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
           protein Y70C5A.2 protein.
          Length = 1037

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -2

Query: 231 LFLGGVQITLMFLCWATFLKIWLLA 157
           LFL G+Q+TL+F C+  FL I  LA
Sbjct: 214 LFLLGIQVTLLF-CFLLFLPICFLA 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,170,018
Number of Sequences: 27780
Number of extensions: 306503
Number of successful extensions: 554
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)