Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_H18
         (918 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0654 - 4791998-4792085,4792250-4792674                           33   0.24 
10_08_0132 + 15087274-15087797,15089544-15089732,15090048-150901...    31   1.3  
12_02_0289 - 16914975-16916238,16916246-16916484                       29   3.9  
10_08_0943 + 21728294-21728675,21728767-21728840,21729469-217304...    29   6.8  
02_04_0245 + 21262645-21262754,21262851-21262997,21263100-212631...    28   9.0  

>03_01_0654 - 4791998-4792085,4792250-4792674
          Length = 170

 Score = 33.5 bits (73), Expect = 0.24
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 62  QPKMAEAFQVAKKQDLPPPGGYKPIPF-KRIPAK 160
           +P MA    +   QD PPPGG+ P+ + +RIP K
Sbjct: 79  KPGMASVKDMPVLQDGPPPGGFAPVRYARRIPTK 112


>10_08_0132 +
           15087274-15087797,15089544-15089732,15090048-15090186,
           15090454-15090594,15091420-15091569,15091908-15092011,
           15092258-15092432,15092714-15092823,15092906-15093073,
           15093180-15093345,15093771-15094049,15094445-15094543,
           15094619-15094676,15095145-15095336,15095693-15095724,
           15096023-15096117,15096321-15096426
          Length = 908

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -3

Query: 268 LNLILKNSLVSYVIEIYRTNCHSNEPSKH 182
           L+ +LK S VSYV E + TNC  +E ++H
Sbjct: 755 LDAVLKLSEVSYVEECFSTNCQPDEFNQH 783


>12_02_0289 - 16914975-16916238,16916246-16916484
          Length = 500

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -3

Query: 142 KWNWLVAPRRGQILFFSHLKSFSHLWLDFEF*PKS 38
           +W  L+A  R ++LF +H+K    +W +  + P S
Sbjct: 166 QWRELIAKNRQRLLFTNHVKDGKSMWSNVPYNPPS 200


>10_08_0943 +
           21728294-21728675,21728767-21728840,21729469-21730443,
           21730617-21730683,21730765-21730827,21731001-21731064,
           21731162-21731255,21731352-21731435,21731523-21731612,
           21731708-21731735,21732117-21732596,21732679-21732740,
           21732820-21732929,21733014-21733101,21733228-21733557,
           21733782-21733904
          Length = 1037

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 529 ERSFDVSTFVPLF-DVTVCIVLLEDWFDQLVGGNTFVDAFSVVSTDLPSGNVSHQLCLSI 353
           +RSF+VS    +F D+ + +  L    DQ +GGN      S+ S  +P        C++I
Sbjct: 174 QRSFEVSIGSNVFSDIEISMPSLPSKIDQFIGGNDGSVLVSMASALVPKEVTDMSGCINI 233


>02_04_0245 +
           21262645-21262754,21262851-21262997,21263100-21263156,
           21263256-21263442,21264700-21264925,21265474-21266003
          Length = 418

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 425 CRRVLRSKYRPPIRERLASALPQHPCSYGAAL 330
           CR+ +R   R  + E LA ++P H   YG  +
Sbjct: 111 CRKEIRCLRRKDVMEALAKSVPAHTIRYGCRI 142


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,663,597
Number of Sequences: 37544
Number of extensions: 373322
Number of successful extensions: 1045
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)