Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_H13
(922 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0082 + 16363742-16364632 27 0.46
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 27 0.57
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 32 0.74
01_01_0083 + 631196-631675 32 0.74
08_02_1049 + 23944526-23945473 30 3.0
07_01_0080 + 587674-588510 29 5.2
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.2
01_03_0005 + 11568545-11569119,11569179-11569191 29 5.2
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 29 5.2
02_05_0962 + 33114226-33114684,33114806-33114853,33115166-331152... 29 6.9
04_04_0802 - 28155281-28155725,28155750-28156081,28156164-281562... 24 7.7
03_06_0600 + 34988743-34989407,34990033-34990051 25 8.4
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 23 8.5
11_04_0158 + 14207463-14207629,14207724-14207774,14207874-142080... 28 9.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 9.1
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847... 28 9.1
>06_03_0082 + 16363742-16364632
Length = 296
Score = 26.6 bits (56), Expect(2) = 0.46
Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 2/18 (11%)
Frame = -2
Query: 567 GGGGXFXX--EKPPPPPP 520
GGG F E+PPPPPP
Sbjct: 157 GGGDQFGGGEERPPPPPP 174
Score = 24.6 bits (51), Expect(2) = 0.46
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = -2
Query: 678 PPXG-GGXKXXPPPQXXGXGXFXRGXXEGPXKKXXXPXGGGG 556
PP G GG PP G G +G P GGG
Sbjct: 92 PPEGLGGWPLLPPLDCGGDGGGDERGGDGSDDDADEPLDGGG 133
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.5 bits (58), Expect(2) = 0.57
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = -2
Query: 678 PPXGGGXKXXPPPQXXGXGXFXRGXXEGPXKKXXXPXGGGGXFXXEKPPPPPP 520
PP GG PPP + + P P G PPPPPP
Sbjct: 12 PPPQGGFPPQPPPM----NPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPP 60
Score = 23.4 bits (48), Expect(2) = 0.57
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 543 EKPPPPPPXG 514
+ PPPPPP G
Sbjct: 91 QPPPPPPPYG 100
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.9 bits (69), Expect = 0.74
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 523 GGGGGFFXXKXPPPPXGXXXFFXXXLXXPPXKXPXPPXLXGGGXFXPPPXXG 678
G GG PPPP PP P PP L G PPP G
Sbjct: 1054 GEVGGAPSPPSPPPPQRENTSVGIQGGIPPLPPPLPPTLGDYGVAPPPPSIG 1105
>01_01_0083 + 631196-631675
Length = 159
Score = 31.9 bits (69), Expect = 0.74
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 520 GGGGGGFFXXKXPPPPXGXXXFFXXXLXXPP 612
GGGGGG F PPPP ++ PP
Sbjct: 97 GGGGGGGFNYPAPPPPNPIVPWYPWYYRSPP 127
Score = 31.5 bits (68), Expect = 0.97
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -2
Query: 678 PPXGGGXKXXPPPQXXGXGXFXRGXXEGPXKKXXXPXGGGGXFXXEKPPPPPP 520
PP PPPQ G G + GGGG F PPPP P
Sbjct: 68 PPSSSSYWNYPPPQGGGGGYIPY------YQPPAGGGGGGGGFNYPAPPPPNP 114
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Frame = +3
Query: 492 GFFFFXXPPX--GGGGGVFXXKKXPPPR---XXXXFFXXXPPXSP 611
G+ + PP GGGGG F PPP ++ PP SP
Sbjct: 86 GYIPYYQPPAGGGGGGGGFNYPAPPPPNPIVPWYPWYYRSPPSSP 130
>08_02_1049 + 23944526-23945473
Length = 315
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 520 GGGGGGFFXXKXPPPPXGXXXFFXXXLXXPPXK 618
GGGGGGF PPP F PP K
Sbjct: 176 GGGGGGFSGFAPRPPPQQPPPSFAMLSTAPPRK 208
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -2
Query: 666 GGXKXXPPPQXXGXGXFXRGXXEGPXKKXXXPXGGGGXFXXEKPPPPPP 520
G PP+ G G F R P P G PPPPPP
Sbjct: 72 GAASTSTPPRLGGDGMFRR-----PPPPPPPPPSSGSPPPPPPPPPPPP 115
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -2
Query: 648 PPPQXXGXGXFXRGXXEGPXKKXXXPXGG--GGXFXXEKPPPPPPXG 514
PPP G +GP P GG GG PPPPPP G
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG------PPPPPPKG 384
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.1 bits (62), Expect = 5.2
Identities = 24/84 (28%), Positives = 29/84 (34%)
Frame = -2
Query: 771 PXFLXGGXXGGAXXKNIFXXXXXXXXXXXX*PPXGGGXKXXPPPQXXGXGXFXRGXXEGP 592
P + GG GG ++ GGG PPP G G G +G
Sbjct: 73 PSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGG-GGGWQQG- 130
Query: 591 XKKXXXPXGGGGXFXXEKPPPPPP 520
GGGG + PPPP P
Sbjct: 131 -------GGGGGAYP--TPPPPNP 145
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 520 GGGGGGFFXXKXPPPPXGXXXFFXXXLXXPP 612
GGGGGG + PPPP +F PP
Sbjct: 130 GGGGGGAY--PTPPPPNPFLPYFPFYYYSPP 158
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 520 GGGGGGFFXXKXPPPPXGXXXFFXXXLXXPPXKXPXPP 633
GGGGGGF PPP P P PP
Sbjct: 23 GGGGGGFSPTAAKPPPPPSPRANGTAAAAKPSASPPPP 60
>02_05_0962 +
33114226-33114684,33114806-33114853,33115166-33115286,
33115760-33116008,33116149-33116302,33116493-33116985,
33117524-33117596,33118285-33118343
Length = 551
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 520 GGGGGGFFXXKXPPPP 567
GGGGGGF + PPP
Sbjct: 55 GGGGGGFLRLRSAPPP 70
>04_04_0802 -
28155281-28155725,28155750-28156081,28156164-28156266,
28156347-28156528,28156617-28156800,28156872-28156960,
28157634-28157710,28157837-28157927,28158230-28158430
Length = 567
Score = 24.2 bits (50), Expect(2) = 7.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 520 GGGGGGFFXXKXPPPP 567
GGGGGG + P PP
Sbjct: 50 GGGGGGHRVVRRPNPP 65
Score = 22.6 bits (46), Expect(2) = 7.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 502 FFXXPXGGGGGG 537
F P GGGGGG
Sbjct: 41 FLSPPLGGGGGG 52
>03_06_0600 + 34988743-34989407,34990033-34990051
Length = 227
Score = 25.0 bits (52), Expect(2) = 8.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 537 PPPPPPXGXXKKKKXRXXXXFFSXPXGG 454
PPPPPP G + + FF+ G
Sbjct: 154 PPPPPPPGPRRISCRKCRGSFFTVVGDG 181
Score = 21.8 bits (44), Expect(2) = 8.4
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = -2
Query: 573 PXGGGGXFXXEKPPPPPP 520
P G PPPPPP
Sbjct: 140 PPGSAASPSVSCPPPPPP 157
>03_05_1096 -
30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 23.4 bits (48), Expect(2) = 8.5
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2
Query: 543 EKPPPPPP 520
E+PPPPPP
Sbjct: 19 EQPPPPPP 26
Score = 23.0 bits (47), Expect(2) = 8.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 537 PPPPPPXG 514
PPPPPP G
Sbjct: 23 PPPPPPPG 30
>11_04_0158 +
14207463-14207629,14207724-14207774,14207874-14208002,
14209342-14209447,14209491-14209601,14210042-14210098,
14210903-14211727
Length = 481
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +2
Query: 557 PP--PPXGXXXFFXGPSXFPRXKXPXPXFXGGG 649
PP PP F GP+ F P P F GGG
Sbjct: 270 PPQLPPGASPLFPPGPAAFHPSSRPMPPFPGGG 302
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +1
Query: 556 PPPPXGXXXFFXXXLXXPPXKXPXPPXLXGGGXFXPPP 669
PPPP + PP P PP L PPP
Sbjct: 585 PPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPP 622
>04_03_0977 +
21381857-21383757,21384299-21384458,21384669-21384717,
21385117-21385169
Length = 720
Score = 28.3 bits (60), Expect = 9.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 567 GGGGXFXXEKPPPPPP 520
GGGG PPPPPP
Sbjct: 93 GGGGWVQLPPPPPPPP 108
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,568,346
Number of Sequences: 37544
Number of extensions: 413478
Number of successful extensions: 3815
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3405
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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