Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_H13
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 36 0.031
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 32 0.50
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 32 0.50
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.66
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.66
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.66
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.7
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 25 3.5
AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (... 29 3.5
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 4.7
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.2
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 36.3 bits (80), Expect = 0.031
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = +1
Query: 505 FXXPXGGGGGGFFXXKXPPPPXGXXXFFXXXLXXPPXKXP--XPPXLXGGGXFXPPPXXG 678
F P GGGGG PPPP G L P + P P GGG P P G
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
Score = 32.3 bits (70), Expect = 0.50
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 573 PXGGGGXFXXEKPPPPPPXG 514
P GGGG PPPPPP G
Sbjct: 20 PSGGGGGCGCAPPPPPPPCG 39
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/55 (38%), Positives = 21/55 (38%)
Frame = +1
Query: 505 FXXPXGGGGGGFFXXKXPPPPXGXXXFFXXXLXXPPXKXPXPPXLXGGGXFXPPP 669
F P G GGGG PPPP L P P L GGG PPP
Sbjct: 17 FLLPSG-GGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPP 70
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 32.3 bits (70), Expect = 0.50
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +1
Query: 505 FXXPXGGGGGGFFXXKXPPPPXGXXXFFXXXLXXPPXKXP--XPPXLXGGGXFXPPP 669
F P GGGGG PPPP G L P + P P L GGG P P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSL-GGGCGGPAP 72
Score = 32.3 bits (70), Expect = 0.50
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 573 PXGGGGXFXXEKPPPPPPXG 514
P GGGG PPPPPP G
Sbjct: 20 PSGGGGGCGCAPPPPPPPCG 39
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 32.3 bits (70), Expect = 0.50
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +1
Query: 505 FXXPXGGGGGGFFXXKXPPPPXGXXXFFXXXLXXPPXKXP--XPPXLXGGGXFXPPP 669
F P GGGGG PPPP G L P + P P L GGG P P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSL-GGGCGGPAP 72
Score = 32.3 bits (70), Expect = 0.50
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 573 PXGGGGXFXXEKPPPPPPXG 514
P GGGG PPPPPP G
Sbjct: 20 PSGGGGGCGCAPPPPPPPCG 39
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -2
Query: 678 PPXGGGXKXXPPPQXXGXGXFXRGXXEGPXKKXXXPXGGGGXFXXEKPPPPPPXG 514
PP GG PPP G G P P GG PPPPPP G
Sbjct: 720 PPITGGPPPPPPP--GGLPPITGGPPPPPPPGGLPPISGG------PPPPPPPPG 766
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = +1
Query: 556 PPPPXGXXXFFXXXLXXPPXKXPXPPXLXGGGXFXPPPXXGLXXXXXXXXXXXXKNVFXX 735
PPPP G PP PP + GG PPP G F
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPP-ISGGPPPPPPPPGGCPPPPPPPPPGG----FKG 782
Query: 736 GXPXXPPP 759
G P PPP
Sbjct: 783 GPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -2
Query: 678 PPXGGGXKXXPPPQXXGXGXFXRGXXEGPXKKXXXPXGGGGXFXXEKPPPPPPXG 514
PP GG PPP G G P P GG PPPPPP G
Sbjct: 720 PPITGGPPPPPPP--GGLPPITGGPPPPPPPGGLPPISGG------PPPPPPPPG 766
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = +1
Query: 556 PPPPXGXXXFFXXXLXXPPXKXPXPPXLXGGGXFXPPPXXGLXXXXXXXXXXXXKNVFXX 735
PPPP G PP PP + GG PPP G F
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPP-ISGGPPPPPPPPGGCPPPPPPPPPGG----FKG 782
Query: 736 GXPXXPPP 759
G P PPP
Sbjct: 783 GPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -2
Query: 678 PPXGGGXKXXPPPQXXGXGXFXRGXXEGPXKKXXXPXGGGGXFXXEKPPPPPPXG 514
PP GG PPP G G P P GG PPPPPP G
Sbjct: 303 PPITGGPPPPPPP--GGLPPITGGPPPPPPPGGLPPISGG------PPPPPPPPG 349
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = +1
Query: 556 PPPPXGXXXFFXXXLXXPPXKXPXPPXLXGGGXFXPPPXXGLXXXXXXXXXXXXKNVFXX 735
PPPP G PP PP + GG PPP G F
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPP-ISGGPPPPPPPPGGCPPPPPPPPPGG----FKG 365
Query: 736 GXPXXPPP 759
G P PPP
Sbjct: 366 GPPPPPPP 373
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +1
Query: 556 PPPPXGXXXFFXXXLXXPPXKXPXPPXLXGGGXFXPPPXXGLXXXXXXXXXXXXKNVFXX 735
PPPP G PP PP G PPP G
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS--PPPPPTGSPPPPPAGGSPPPPRA--- 294
Query: 736 GXPXXPPPQKGXP 774
G P PPP +G P
Sbjct: 295 GSPPPPPPPRGSP 307
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/59 (30%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Frame = -2
Query: 678 PPXGGGXKXXPPPQXXGXGXFXRGXXEGPXKKXXXPXGGGGXFXXEK----PPPPPPXG 514
PP G PPP G P P GG + PPPPPP G
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +1
Query: 556 PPPPXGXXXFFXXXLXXPPXKXPXPPXLXGGGXFXPPPXXGLXXXXXXXXXXXXKNVFXX 735
PPPP G PP PP G PPP G
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS--PPPPPTGSPPPPPAGGSPPPPRA--- 315
Query: 736 GXPXXPPPQKGXP 774
G P PPP +G P
Sbjct: 316 GSPPPPPPPRGSP 328
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/59 (30%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Frame = -2
Query: 678 PPXGGGXKXXPPPQXXGXGXFXRGXXEGPXKKXXXPXGGGGXFXXEK----PPPPPPXG 514
PP G PPP G P P GG + PPPPPP G
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +1
Query: 556 PPPPXGXXXFFXXXLXXPPXKXPXPPXLXGGGXFXPPPXXGLXXXXXXXXXXXXKNVFXX 735
PPPP G PP PP G PPP G
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS--PPPPPTGSPPPPPAGGSPPPPRA--- 300
Query: 736 GXPXXPPPQKGXP 774
G P PPP +G P
Sbjct: 301 GSPPPPPPPRGSP 313
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/59 (30%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Frame = -2
Query: 678 PPXGGGXKXXPPPQXXGXGXFXRGXXEGPXKKXXXPXGGGGXFXXEK----PPPPPPXG 514
PP G PPP G P P GG + PPPPPP G
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/68 (25%), Positives = 22/68 (32%)
Frame = +1
Query: 559 PPPXGXXXFFXXXLXXPPXKXPXPPXLXGGGXFXPPPXXGLXXXXXXXXXXXXKNVFXXG 738
PPP + PP + P PP + G PP G + G
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Query: 739 XPXXPPPQ 762
P PPP+
Sbjct: 347 MPPPPPPR 354
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/68 (25%), Positives = 22/68 (32%)
Frame = +1
Query: 559 PPPXGXXXFFXXXLXXPPXKXPXPPXLXGGGXFXPPPXXGLXXXXXXXXXXXXKNVFXXG 738
PPP + PP + P PP + G PP G + G
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Query: 739 XPXXPPPQ 762
P PPP+
Sbjct: 357 MPPPPPPR 364
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 556 PPPPXGXXXFFXXXLXXPPXKXPXPPXLXGGGXFXPPPXXGL 681
PPPP L P P PP + GG PPP GL
Sbjct: 561 PPPPPPP---LPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGL 599
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 25.0 bits (52), Expect(2) = 3.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 567 GGGGXFXXEKPPPPPP 520
GG G +PPPPPP
Sbjct: 24 GGKGRPPPARPPPPPP 39
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 537 PPPPPPXG 514
PPPPPP G
Sbjct: 35 PPPPPPRG 42
>AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (grd
related) protein27 protein.
Length = 139
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 567 GGGGXFXXEKPPPPPPXGXXKKKK 496
GGGG PPPPP G +KK
Sbjct: 25 GGGGGCGCGAPPPPPACGCGGRKK 48
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 573 PXGGGGXFXXEKPPPPPPXG 514
P GGGG PPPPP G
Sbjct: 20 PSGGGGGCGCAPPPPPPACG 39
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 680 NPXLGGGXNXPPPXKXGGXGXFXGGXXR 597
NP GGG PP + GG G GG R
Sbjct: 263 NPMGGGGGYPQPPPQQGGGGGGAGGMFR 290
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +2
Query: 557 PPPPXGXXXFFXGPSXFPRXKXPXPXFXGGGXXXLPPPXGG 679
PPPP G P F K P P F G PPP G
Sbjct: 726 PPPPQGIP-----PMGFDPNKPPPPMFQQGFNAGAPPPPFG 761
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -2
Query: 678 PPXGGGXKXXPPPQXXGXGXFXRGXXEGPXKKXXXPXGGGG 556
PP GG PPP G RG GP GGGG
Sbjct: 772 PPPRGGMHHMPPPPSFRGG---RGGHGGPPPPHFDRRGGGG 809
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,629,086
Number of Sequences: 27780
Number of extensions: 225178
Number of successful extensions: 1506
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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