Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_H12
         (779 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0297 + 16602176-16602553                                         33   0.19 
05_05_0154 - 22774503-22774652,22774738-22774968,22775508-227756...    30   1.8  
01_06_0004 + 25507739-25508206,25509346-25509477,25509910-255100...    30   1.8  
01_06_0046 + 25943183-25943590                                         29   3.1  
10_05_0011 - 7822847-7822880,7823653-7823754,7823859-7824106,782...    29   5.5  

>10_08_0297 + 16602176-16602553
          Length = 125

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = -1

Query: 173 TQSRAESPFTEPKTSNMAAXGASGRGREYGRALRPRVGCG 54
           T   A SP +  + S  AA G  GRGR  G A  P  G G
Sbjct: 26  TMLHAPSPLSSRRASRAAAGGRGGRGRRKGGAPIPAAGAG 65


>05_05_0154 -
           22774503-22774652,22774738-22774968,22775508-22775675,
           22775760-22775936,22776281-22776302,22776351-22776417,
           22776583-22776774,22776819-22776962,22778421-22779102
          Length = 610

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +2

Query: 647 PPXXGGGXKXXXXXXXGGGKXXXXGGGGXXKKK 745
           P   GGG K       GGG     GGGG  KK+
Sbjct: 22  PASTGGGKKKPHQARNGGGGGGGGGGGGWEKKR 54


>01_06_0004 +
           25507739-25508206,25509346-25509477,25509910-25510086,
           25510175-25510219,25510305-25510512,25510766-25510825,
           25510826-25511016,25511219-25511614
          Length = 558

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 55  PHPTRGRSARPYSRPRPDAPXAAMFDV 135
           P P+ G+  +P SRP P +P  A+F+V
Sbjct: 115 PTPSCGKGNQPPSRPTPTSPQGAVFNV 141


>01_06_0046 + 25943183-25943590
          Length = 135

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 729 PPPPXXXFFPPPXXXXXXXFXPPP 658
           PPPP   + PPP       + PPP
Sbjct: 57  PPPPYYYYSPPPPAYYPGSYCPPP 80


>10_05_0011 - 7822847-7822880,7823653-7823754,7823859-7824106,
            7824195-7824240,7824368-7825984,7826673-7826797,
            7826915-7829083
          Length = 1446

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -1

Query: 245  LNESGNPFKYSRGX*LTGTHCCXCTQSRAESPFTEPKTS-NMAAXGASGRGREYGRALRP 69
            +N   +P+ +  G    G +    +  +  SP+  PK   +M     SG G E   ++RP
Sbjct: 1204 INPQISPW-FQHGSNRNGHNLAMYSVRKTASPYNHPKVPWSMDTSSVSGHGLECSTSVRP 1262

Query: 68   RVGCGIK 48
             +  G+K
Sbjct: 1263 EMPSGLK 1269


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,209,453
Number of Sequences: 37544
Number of extensions: 315372
Number of successful extensions: 1204
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)