Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_H12
         (779 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-202|AAF52054.1|  562|Drosophila melanogaster CG1113-PA ...    34   0.25 
AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p pro...    31   2.4  
AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA...    31   2.4  

>AE014297-202|AAF52054.1|  562|Drosophila melanogaster CG1113-PA
           protein.
          Length = 562

 Score = 33.9 bits (74), Expect = 0.25
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = -1

Query: 158 ESPFTEPKTSNMAAXGASGRGREYGRALRPRVGCGIKSNLKEFPIVS 18
           +SP T  K S+ A+  A GRGR  GR  +P+ G  +K   K  P +S
Sbjct: 304 QSPTTSSKRSSSASSAARGRGRR-GRVRKPKPGSSVKDE-KPLPPLS 348


>AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p
           protein.
          Length = 993

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = -3

Query: 729 PPPPXXXFFPPPXXXXXXXFXPPPXXGGXXPKKXXXG 619
           PPPP   + PPP         PPP  G   P     G
Sbjct: 448 PPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSG 484


>AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA
           protein.
          Length = 993

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = -3

Query: 729 PPPPXXXFFPPPXXXXXXXFXPPPXXGGXXPKKXXXG 619
           PPPP   + PPP         PPP  G   P     G
Sbjct: 448 PPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSG 484


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,502,402
Number of Sequences: 53049
Number of extensions: 480568
Number of successful extensions: 1505
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)