Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_H11
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1136 + 24218601-24218734,24218769-24219906                       30   2.2  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   3.8  
07_01_0080 + 587674-588510                                             29   3.8  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   3.8  
01_01_0796 + 6190931-6192745                                           29   5.0  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   6.6  

>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -2

Query: 720 PGPXXXGXXXF-GGGXGXGPQKXXPXPXGGGG 628
           PGP   G     GGG G GP    P   GGGG
Sbjct: 98  PGPLGGGGARPPGGGGGGGPPSLPPGAGGGGG 129


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 629 PPPPXGXGXXFWGPXPXPPP 688
           PPP  G G  F  P P PPP
Sbjct: 652 PPPAPGIGNKFPAPPPPPPP 671



 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 629 PPPPXGXGXXFWGPXPXPPP 688
           PPPP G    F  P P PPP
Sbjct: 551 PPPPSGNKPAFSPPPPPPPP 570


>07_01_0080 + 587674-588510
          Length = 278

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = +2

Query: 596 GGXGXFXXXKXPPPPXGXGXXFWGPXPXPPPKXXXPXXSGP 718
           GG G F     PPPP         P P PPP    P    P
Sbjct: 83  GGDGMFRRPPPPPPPPPSSG---SPPPPPPPPPPPPPPPPP 120



 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +3

Query: 594 GGXGXFXXXXKXPPPPGXXGXFFGAPXPXPPQKXXXP 704
           GG G F      PPPP   G     P P PP     P
Sbjct: 83  GGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPP 119


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +2

Query: 629 PPPPXGXGXXFWGPXPXPPPKXXXPXXSGPGV 724
           PPPP   G    GP P PP        + PGV
Sbjct: 364 PPPPPPPGGKKGGPPPPPPKGGASRPPAAPGV 395



 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
 Frame = +2

Query: 629 PPPPXGXGXX--FWGPXPXPPPKXXXPXXSGP 718
           PPPP G        GP P PPPK   P    P
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369


>01_01_0796 + 6190931-6192745
          Length = 604

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +2

Query: 629 PPPPXGXGXXFWGPXPXPPPKXXXP 703
           PPPP   G   W P   PPP    P
Sbjct: 239 PPPPPAAGGSLWIPELPPPPVEGSP 263


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +2

Query: 629 PPPPXGXGXXFWGPXPXPPPKXXXPXXSGP 718
           PPPP   G     P P PPP    P  + P
Sbjct: 93  PPPPPPYGVNSSQPPPPPPPPPSPPPSAPP 122



 Score = 28.3 bits (60), Expect = 8.8
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 632 PPPXGXGXXFWGPXPXPPPKXXXP 703
           PPP G    F  P P PPP    P
Sbjct: 42  PPPQGAPPPFLAPPPPPPPGPPPP 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,231,201
Number of Sequences: 37544
Number of extensions: 250234
Number of successful extensions: 1031
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)