Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_H09
(939 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical pr... 57 2e-08
AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical... 48 1e-05
AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical ... 45 9e-05
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 32 0.51
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 32 0.51
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 32 0.51
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 32 0.51
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 32 0.51
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 32 0.51
AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger t... 32 0.51
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 32 0.51
>Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical
protein B0513.3 protein.
Length = 62
Score = 56.8 bits (131), Expect = 2e-08
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +2
Query: 95 MAKSKNHTNHNQNRKAHRNGIKKPRK 172
MAKSKNHTNHNQN+KAHRNGI KP+K
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGITKPKK 26
>AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical
protein Y47H9C.14 protein.
Length = 87
Score = 48.0 bits (109), Expect = 1e-05
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +2
Query: 101 KSKNHTNHNQNRKAHRNGIKKPRKTRHESTLVHGSK 208
K +NHTNHN+N KAHRNGI KP+K H + GS+
Sbjct: 14 KPENHTNHNRNNKAHRNGITKPKK--HIFLSIEGSR 47
>AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical
protein Y37H9A.5 protein.
Length = 167
Score = 44.8 bits (101), Expect = 9e-05
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 101 KSKNHTNHNQNRKAHRNGIKKPR---KTRHESTLVHGSKIFKESKVLQEG*PEASQATRE 271
KSKNHTNHNQN AHR GI KP+ VH + S++ Q P ++ R
Sbjct: 80 KSKNHTNHNQNNTAHRIGITKPKIFLSIEGSRRQVHQEPPLRGSRLPQCKIPRLQRSDRS 139
Query: 272 G 274
G
Sbjct: 140 G 140
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 51 LVLSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQ 224
+ + SE +++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 655 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHH 714
Query: 225 RFCKKGNLKPAK 260
K+ N P+K
Sbjct: 715 CSGKRDNKDPSK 726
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 51 LVLSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQ 224
+ + SE +++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 723 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHH 782
Query: 225 RFCKKGNLKPAK 260
K+ N P+K
Sbjct: 783 CSGKRDNKDPSK 794
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 51 LVLSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQ 224
+ + SE +++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 723 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHH 782
Query: 225 RFCKKGNLKPAK 260
K+ N P+K
Sbjct: 783 CSGKRDNKDPSK 794
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 51 LVLSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQ 224
+ + SE +++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 723 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHH 782
Query: 225 RFCKKGNLKPAK 260
K+ N P+K
Sbjct: 783 CSGKRDNKDPSK 794
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 51 LVLSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQ 224
+ + SE +++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 723 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHH 782
Query: 225 RFCKKGNLKPAK 260
K+ N P+K
Sbjct: 783 CSGKRDNKDPSK 794
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 51 LVLSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQ 224
+ + SE +++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 723 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHH 782
Query: 225 RFCKKGNLKPAK 260
K+ N P+K
Sbjct: 783 CSGKRDNKDPSK 794
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 51 LVLSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQ 224
+ + SE +++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 723 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHH 782
Query: 225 RFCKKGNLKPAK 260
K+ N P+K
Sbjct: 783 CSGKRDNKDPSK 794
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 51 LVLSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQ 224
+ + SE +++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 281 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHH 340
Query: 225 RFCKKGNLKPAK 260
K+ N P+K
Sbjct: 341 CSGKRDNKDPSK 352
>AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 781
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 51 LVLSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQ 224
+ + SE +++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 303 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHH 362
Query: 225 RFCKKGNLKPAK 260
K+ N P+K
Sbjct: 363 CSGKRDNKDPSK 374
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 51 LVLSSESKWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQ 224
+ + SE +++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 655 MTVESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHH 714
Query: 225 RFCKKGNLKPAK 260
K+ N P+K
Sbjct: 715 CSGKRDNKDPSK 726
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,350,141
Number of Sequences: 27780
Number of extensions: 166687
Number of successful extensions: 533
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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