Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_H06
         (1016 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1153 - 28047125-28047751                                         30   3.4  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   7.9  

>06_03_1153 - 28047125-28047751
          Length = 208

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
 Frame = +2

Query: 584 PP--FXPGXFXPPXXPPPFFFXPP 649
           PP  F P    PP  PPP F+ PP
Sbjct: 11  PPAIFCPPPLSPPPPPPPIFYSPP 34


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +2

Query: 584 PPFXPGXFXPPXXPPPFFFXPPPXXK 661
           PP  P    PP  PPP    PPP  K
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPK 342


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,497,420
Number of Sequences: 37544
Number of extensions: 142256
Number of successful extensions: 509
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2998973440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)