Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_H06
         (1016 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110383-1|AAI10384.1|  594|Homo sapiens FIP1 like 1 (S. cerevis...    31   6.7  
BC052959-1|AAH52959.1|  559|Homo sapiens FIP1L1 protein protein.       31   6.7  
BC024016-1|AAH24016.1|  559|Homo sapiens FIP1L1 protein protein.       31   6.7  
BC017724-1|AAH17724.1|  378|Homo sapiens FIP1L1 protein protein.       31   6.7  
BC011543-1|AAH11543.1|  328|Homo sapiens FIP1L1 protein protein.       31   6.7  
AY366510-1|AAQ88277.1|  594|Homo sapiens pre-mRNA 3'end processi...    31   6.7  

>BC110383-1|AAI10384.1|  594|Homo sapiens FIP1 like 1 (S.
           cerevisiae) protein.
          Length = 594

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +2

Query: 584 PPFXPGXFXPPXXPPPFFFXPPP 652
           PPF P    P   PPP F  PPP
Sbjct: 357 PPFFPPGAPPTHLPPPPFLPPPP 379


>BC052959-1|AAH52959.1|  559|Homo sapiens FIP1L1 protein protein.
          Length = 559

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +2

Query: 584 PPFXPGXFXPPXXPPPFFFXPPP 652
           PPF P    P   PPP F  PPP
Sbjct: 322 PPFFPPGAPPTHLPPPPFLPPPP 344


>BC024016-1|AAH24016.1|  559|Homo sapiens FIP1L1 protein protein.
          Length = 559

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +2

Query: 584 PPFXPGXFXPPXXPPPFFFXPPP 652
           PPF P    P   PPP F  PPP
Sbjct: 322 PPFFPPGAPPTHLPPPPFLPPPP 344


>BC017724-1|AAH17724.1|  378|Homo sapiens FIP1L1 protein protein.
          Length = 378

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +2

Query: 584 PPFXPGXFXPPXXPPPFFFXPPP 652
           PPF P    P   PPP F  PPP
Sbjct: 342 PPFFPPGAPPTHLPPPPFLPPPP 364


>BC011543-1|AAH11543.1|  328|Homo sapiens FIP1L1 protein protein.
          Length = 328

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +2

Query: 584 PPFXPGXFXPPXXPPPFFFXPPP 652
           PPF P    P   PPP F  PPP
Sbjct: 91  PPFFPPGAPPTHLPPPPFLPPPP 113


>AY366510-1|AAQ88277.1|  594|Homo sapiens pre-mRNA 3'end processing
           factor FIP1 protein.
          Length = 594

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +2

Query: 584 PPFXPGXFXPPXXPPPFFFXPPP 652
           PPF P    P   PPP F  PPP
Sbjct: 357 PPFFPPGAPPTHLPPPPFLPPPP 379


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,396,680
Number of Sequences: 237096
Number of extensions: 741129
Number of successful extensions: 2302
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1984
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13654981522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)