Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_H03
         (905 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    26   1.8  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    25   2.4  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   4.2  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   5.5  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   5.5  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   7.3  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 333 FFDYKIRTCIFRFGDW 286
           +F Y ++TC+ + G W
Sbjct: 158 YFPYDVQTCVLKLGSW 173


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 333 FFDYKIRTCIFRFGDW 286
           +F Y  +TC+ +FG W
Sbjct: 160 YFPYDEQTCLMKFGSW 175


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 333 FFDYKIRTCIFRFGDW 286
           +F +  +TCI +FG W
Sbjct: 157 YFPFDQQTCIMKFGSW 172


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 333 FFDYKIRTCIFRFGDW 286
           +F +  +TC+ +FG W
Sbjct: 158 YFPFDEQTCVLKFGSW 173


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 333 FFDYKIRTCIFRFGDW 286
           +F +  +TC+ +FG W
Sbjct: 154 YFPFDEQTCVMKFGSW 169


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 10/51 (19%), Positives = 27/51 (52%)
 Frame = +1

Query: 391 YGLAPVSLLNQSNETQTKRLVQQYDELKAEGIPEDEIIEKAAQAVAVERHS 543
           YGL  + ++ ++N  +T +L+Q+ ++   + +       K  Q  ++++ S
Sbjct: 138 YGLQQLHVMERNNWKETHQLIQECEQDHVQRLSNQRSHYKRIQCYSLKQRS 188


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,578
Number of Sequences: 2352
Number of extensions: 13756
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)