Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_H02
(929 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 249 5e-67
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 66 9e-12
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 66 9e-12
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 63 5e-11
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 58 2e-09
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 52 2e-07
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 50 4e-07
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 49 8e-07
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 44 2e-05
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 31 0.23
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 28 1.6
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 2.2
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 3.8
SPBC1773.14 |arg7||argininosuccinate lyase |Schizosaccharomyces ... 26 6.6
SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces po... 26 8.7
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 249 bits (609), Expect = 5e-67
Identities = 118/183 (64%), Positives = 151/183 (82%)
Frame = +3
Query: 201 RFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKG 380
R YAKD++FG D RA +L GVD LA AV+VT+GPKGRNV+++Q +GSPKITKDGVTVA+
Sbjct: 31 RTYAKDLKFGVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARS 90
Query: 381 VELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRG 560
V LKDKF+N+GA+LVQ+VA+ TNE AGDGTTTATVL RAI E ++ G NP+++RRG
Sbjct: 91 VSLKDKFENLGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRG 150
Query: 561 VMLAVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIADAMKKVGRDGVITVKD 740
+ LAVD V E L+ + +TT EEI+QVATISANGDT IG+L+A AM++VG++GVITVK+
Sbjct: 151 IQLAVDNVVEFLQANKRDITTSEEISQVATISANGDTHIGELLAKAMERVGKEGVITVKE 210
Query: 741 GKT 749
G+T
Sbjct: 211 GRT 213
Score = 33.1 bits (72), Expect = 0.057
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 743 KNLTDELEIIEGMKFDRGIL 802
+ ++DELE+ EGMKFDRG +
Sbjct: 212 RTISDELEVTEGMKFDRGYI 231
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 65.7 bits (153), Expect = 9e-12
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 3/174 (1%)
Frame = +3
Query: 228 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 407
G D + +A+ V ++GP+G + IL G +T DG T+ +E++ +
Sbjct: 32 GIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQI-- 89
Query: 408 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVK 587
AKL+ ++ + ++E GDGTT VLA A+ ++ I KG +PI I G A
Sbjct: 90 --AKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAV 147
Query: 588 EKLKGMSKPVT-TPEEIAQV--ATISANGDTAIGKLIADAMKKVGRDGVITVKD 740
+ L +S V +PE + + ++ G + K D + D V++V D
Sbjct: 148 KHLDAISDVVDFSPENTTNLFRSAKTSLGSKVVSK-AHDHFANIAVDAVLSVAD 200
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 65.7 bits (153), Expect = 9e-12
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 5/187 (2%)
Frame = +3
Query: 234 DVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIG 413
+VR + +ADA+ ++GPKG + +++ G +T DG T+ K + + +
Sbjct: 19 EVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSV----LHPA 74
Query: 414 AKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEI----RRGVMLAVDA 581
AK++ +++ + EAGDGTT+ +LA ++ + + KG +P I +R VD
Sbjct: 75 AKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDC 134
Query: 582 VKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIADAMKKVGRDGVITVKDGKTSL-T 758
+KE ++ ++ E + + AT S N + I ++ + + D V+ V D + +
Sbjct: 135 MKE--NALAIELSDRESLLRAATTSLN--SKIVSQYSNLLAPIAVDAVLKVIDPRVATNV 190
Query: 759 SLKSLRV 779
LK +R+
Sbjct: 191 DLKDIRI 197
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 63.3 bits (147), Expect = 5e-11
Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Frame = +3
Query: 228 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQ-SWGSPKITKDGVTVAKGVELKDKFQ 404
G + R G + D V T+GPKG + IL+ S G +T DG T+ K + L
Sbjct: 18 GENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIAL----D 73
Query: 405 NIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVML----A 572
N AK++ N++ ++E GDGTT+ V A + ++ ++ +P I G + A
Sbjct: 74 NAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTA 133
Query: 573 VDAVK-EKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIADAMKKVGRDGVITVKDGKT 749
+DA++ + S P ++ +A + + + I + ++ D V+ +K G T
Sbjct: 134 IDALRASSIDNSSDPAKFRSDLENIARTTLS--SKILSQNKNHFAQLAVDAVLRLK-GST 190
Query: 750 SLTSLKSLRV 779
+L +++ +++
Sbjct: 191 NLDNIQIIKI 200
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 58.0 bits (134), Expect = 2e-09
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 3/192 (1%)
Frame = +3
Query: 228 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 407
G DVR + +A+ V ++GP G + +L G +T DG T+ + L D
Sbjct: 19 GEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATI---LSLLDVEHP 75
Query: 408 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAV-DAV 584
G LV+ +A ++E GDGTT+ ++A + + E + +P I G LA+ +AV
Sbjct: 76 AGKVLVE-LAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 585 KEKLKGMSKPVTT--PEEIAQVATISANGDTAIGKLIADAMKKVGRDGVITVKDGKTSLT 758
K +S V + E + VA S + IG +D + D +++VK +
Sbjct: 135 KFMTDVLSCSVDSLGKESLINVAKTSMS-SKIIGN-DSDFFSTMAVDAMLSVKTSNSKGE 192
Query: 759 SLKSLRV*NLIE 794
+ ++ N+++
Sbjct: 193 TRYPVKAVNILK 204
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 51.6 bits (118), Expect = 2e-07
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 1/157 (0%)
Frame = +3
Query: 270 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 449
L D + +GP G +L G+ K+TKDG + +++ QN A + A +
Sbjct: 28 LQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQI----QNPTASCIAKAATAQD 83
Query: 450 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSKPVTTPE 629
+ GDGTT+ +L + K+ I +G +P I G LA + L
Sbjct: 84 DATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEVDR 143
Query: 630 EI-AQVATISANGDTAIGKLIADAMKKVGRDGVITVK 737
E+ VA S + T I + +++ D ++T++
Sbjct: 144 EVLLNVAKTSLS--TKISSKVVESLAPAVVDAILTIR 178
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 50.4 bits (115), Expect = 4e-07
Identities = 30/108 (27%), Positives = 50/108 (46%)
Frame = +3
Query: 276 DAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEE 455
D + T+GP G + ++ G I+ DG T+ K +++ AK + ++A + E
Sbjct: 38 DTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHP----AAKTLVDIARAQDAE 93
Query: 456 AGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLK 599
GDGTT+ V A + +E + G + I RG A K+K
Sbjct: 94 VGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIK 141
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 49.2 bits (112), Expect = 8e-07
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 1/148 (0%)
Frame = +3
Query: 252 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 431
+Q +AD + +GP+ +L GS +T DG + + +E+ AK +
Sbjct: 25 IQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHP----AAKSMIE 80
Query: 432 VANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK 611
+A +EE GDGTT+ +LA I + + +P+ + R A++ + ++
Sbjct: 81 LARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITL 140
Query: 612 PVTTPEEIAQVATISANGDTAIG-KLIA 692
PV + I T IG KL+A
Sbjct: 141 PVNVDDNAEMFRLIR----TCIGTKLVA 164
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 44.4 bits (100), Expect = 2e-05
Identities = 27/110 (24%), Positives = 46/110 (41%)
Frame = +3
Query: 270 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 449
L++ ++GP G+N I+ +T D T+ + +E+ AKLV +
Sbjct: 38 LSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHP----AAKLVVDATQQQE 93
Query: 450 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLK 599
E GD V + + I G P+EI +G +A+ E L+
Sbjct: 94 NELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLE 143
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 31.1 bits (67), Expect = 0.23
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +3
Query: 309 RNVILEQSWGSPKITKDGVTVAK-GVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATV 485
R VI ++ S +T G T G+ELKD+F+ +G K++ T + T +
Sbjct: 542 RKVIKQERPDSIYVTFGGQTALNVGIELKDEFEQLGVKVL-----GTPIDTIITTEDREL 596
Query: 486 LARAIAKEGFEKISKGANPIEIRRGVMLAVD 578
ARA+ E EK +K A+ I + ++ D
Sbjct: 597 FARAM-DEINEKCAKSASASSIEEAIKVSKD 626
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = -2
Query: 739 SFTVITPSLPTFFIASAMSLPIAVSPLADMVATCAISSGVVTGFDIPLSFSLTAS 575
S T +T S P+ ++S S+P S ++ V+T + +S +GF LS + T S
Sbjct: 132 SSTTLTSSSPSA-VSSTTSIPSISSTISSSVSTSSFTSLSSSGFSTVLSSTNTTS 185
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 2.2
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = -2
Query: 778 TLNDFKLVSEVFPSFTVI---TPSLPTFFIASAMSLPIAVSPLADMVATCAISSGVVT-- 614
T + + S + S T++ TPS + I+S+ + + S L+ ++T ISS + T
Sbjct: 608 TSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYS 667
Query: 613 GFDIPLSFSLTASTASI 563
IP S +L +S++S+
Sbjct: 668 SSVIPSSSTLVSSSSSL 684
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 3.8
Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 2/170 (1%)
Frame = -2
Query: 718 SLPTFFIASAMSLPIAVSPLADMVATCAISSGVVTGFDIPLSF--SLTASTASITPLLIS 545
S P + S + + +PL+ + + A S+ + PLS S TA++AS TPL
Sbjct: 305 STPLTSVNSTTTTSASSTPLSSV--SSANSTTATSTSSTPLSSVNSTTATSASSTPLTSV 362
Query: 544 IGLAPFDIFSKPSFAIARXXXXXXXXXXXXXXXXXXXTFCTNLAPMFWNLSLSSTPLATV 365
S P ++ T ++ AP + N S S P ++V
Sbjct: 363 NSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSY-NTS-SVLPTSSV 420
Query: 364 TPSFVIFGDPQDCSKITFLPFGPIVTATASARMSTPCSMRALTSAPNLTS 215
+ + + + + + P + + TA++ STP S T+A + +S
Sbjct: 421 SSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASS 470
>SPBC1773.14 |arg7||argininosuccinate lyase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 461
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -2
Query: 664 PLADMVATCAISSGVVTGFDIPLSFSLTASTASITPLLISIGLAPF 527
PL D T + S ++TG L+ + T S+TP L++ LA +
Sbjct: 332 PLFDAFKTVSDSLQILTGVVSTLTINPTKIAESLTPDLLATDLAEY 377
>SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 396
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 189 YQLSRFYAKDVRFGADVRALMLQGVDILADAV 284
Y+L+ F+ R+ V LQGV + AD V
Sbjct: 152 YRLTNFFQNHRRYAKSVDEKQLQGVALTADEV 183
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,260,076
Number of Sequences: 5004
Number of extensions: 63756
Number of successful extensions: 206
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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