Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_H01
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0065 - 40851101-40851247,40851352-40851495,40851781-408518...    54   1e-07
11_02_0049 - 7751779-7751925,7752046-7752189,7752398-7752489,775...    51   1e-06
11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536...    49   6e-06
05_01_0406 + 3197189-3197389,3197491-3197628,3198463-3198544,319...    49   6e-06
02_04_0050 - 19245087-19245113,19245306-19245449,19245546-192456...    36   0.060
04_03_0825 - 20092781-20092801,20092844-20093079,20093166-200932...    35   0.079
04_04_1167 + 31432731-31433769,31433893-31433941,31434363-314344...    30   3.0  
04_01_0613 - 8042568-8042686,8043107-8043206,8043550-8043594,804...    29   3.9  
06_01_0883 + 6768998-6769381,6769518-6769616,6769664-6769726,677...    28   9.0  

>01_07_0065 -
           40851101-40851247,40851352-40851495,40851781-40851872,
           40851954-40852035,40852127-40852193,40852284-40852375,
           40852470-40852586,40852764-40852881,40852969-40853161,
           40853258-40853339,40853607-40853744,40853829-40854023
          Length = 488

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 23/52 (44%), Positives = 32/52 (61%)
 Frame = +1

Query: 718 DIFRGFAIALMIFVNAGGGGYSVFAHSTWNGLPVADVVSRWFAFTMGGGLXL 873
           D+FRG  +ALMI V+  GG + V  H+ WNG  +AD V  +F F +G  + L
Sbjct: 57  DVFRGLTVALMILVDGAGGEWPVIGHAPWNGCNLADFVMPFFLFIVGMAIPL 108


>11_02_0049 -
           7751779-7751925,7752046-7752189,7752398-7752489,
           7752745-7752811,7753148-7753264,7753318-7753462,
           7753574-7753689,7753789-7753865,7753995-7754076,
           7754180-7754317,7754781-7754999
          Length = 447

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/47 (48%), Positives = 27/47 (57%)
 Frame = +1

Query: 718 DIFRGFAIALMIFVNAGGGGYSVFAHSTWNGLPVADVVSRWFAFTMG 858
           D FRG  I LMI V+  GG Y    HS WNG  +AD V  +F F +G
Sbjct: 65  DAFRGLTIVLMILVDDAGGAYERMDHSPWNGCTLADFVMPFFLFIVG 111


>11_06_0013 -
           19252779-19252805,19252947-19253090,19253572-19253663,
           19253757-19253835,19253965-19254031,19254163-19254254,
           19254986-19255102,19255254-19255365,19255479-19255594,
           19255680-19255756,19255912-19255993,19256077-19256214,
           19258806-19259009
          Length = 448

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 22/50 (44%), Positives = 31/50 (62%)
 Frame = +1

Query: 718 DIFRGFAIALMIFVNAGGGGYSVFAHSTWNGLPVADVVSRWFAFTMGGGL 867
           D+FRG  +ALMI V+  GG     +HS W+G+ +AD V  +F F +G  L
Sbjct: 60  DVFRGITVALMILVDDVGGIVPAISHSPWDGVTLADFVFPFFLFIVGVSL 109


>05_01_0406 +
           3197189-3197389,3197491-3197628,3198463-3198544,
           3198658-3198734,3198829-3198935,3199367-3199505,
           3200602-3200718,3200850-3200941,3201096-3201162,
           3201249-3201355,3201468-3201546,3201751-3201894,
           3202095-3202235
          Length = 496

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 23/53 (43%), Positives = 30/53 (56%)
 Frame = +1

Query: 718 DIFRGFAIALMIFVNAGGGGYSVFAHSTWNGLPVADVVSRWFAFTMGGGLXLV 876
           D+FRG  +A+MI V+  GG +    HS W G+ VAD V   F F +G    LV
Sbjct: 59  DVFRGLTVAMMILVDDAGGAWPGMNHSPWLGVTVADFVMPAFLFIIGVSAALV 111


>02_04_0050 -
           19245087-19245113,19245306-19245449,19245546-19245637,
           19245733-19245811,19245902-19245968,19246084-19246175,
           19246267-19246383,19246472-19246583,19246884-19246990,
           19247113-19247189,19247351-19247432,19247526-19247663,
           19248176-19248234,19249155-19249233
          Length = 423

 Score = 35.5 bits (78), Expect = 0.060
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +1

Query: 745 LMIFVNAGGGGYSVFAHSTWNGLPVADVVSRWFAFTMGGGLXL 873
           LMI V+  G       HS W+G+ +AD V  +F F +G  L L
Sbjct: 47  LMIIVDDAGAFLPALNHSPWDGVTIADFVMPFFLFMVGISLTL 89


>04_03_0825 -
           20092781-20092801,20092844-20093079,20093166-20093244,
           20093344-20093482,20093533-20093624,20093714-20093830,
           20093930-20094041,20094154-20094260,20094351-20094427,
           20094517-20094598,20094702-20094839,20095495-20095608
          Length = 437

 Score = 35.1 bits (77), Expect = 0.079
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +1

Query: 745 LMIFVNAGGGGYSVFAHSTWNGLPVADVVSRWFAFTMGGGLXL 873
           LMI V+  G       HS W+G+ +AD V  +F F +G  L L
Sbjct: 39  LMILVDDAGAFLPAINHSPWDGVTLADFVMPFFLFIVGVALAL 81


>04_04_1167 +
           31432731-31433769,31433893-31433941,31434363-31434427,
           31435237-31435346,31436327-31436388,31438067-31438113,
           31438148-31438272,31438651-31438764,31438852-31438979,
           31439059-31439154,31439565-31439706,31439799-31439893,
           31439966-31440095,31440179-31440323,31440430-31440656
          Length = 857

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 397 IICKGSYQFGEYGQYVFNLTEGAKNKCLPRMT 492
           I+ KG  QFG++G  +  L E  K  C+P +T
Sbjct: 182 ILVKGLCQFGKFGDAISLLYEMPKQGCVPNVT 213


>04_01_0613 -
           8042568-8042686,8043107-8043206,8043550-8043594,
           8043691-8043770,8045082-8046322,8047077-8047507
          Length = 671

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 748 MIFVNAGGGGYSVFAHSTWNGLPVADVVSRWFAFTMG 858
           M++  A  G   + AHS +NG+P  DVVS W A   G
Sbjct: 242 MVYGYAKNGKVEI-AHSIFNGMPAKDVVS-WSAMIAG 276


>06_01_0883 +
           6768998-6769381,6769518-6769616,6769664-6769726,
           6770883-6770931,6771338-6771405,6771463-6771715,
           6772244-6772380,6772708-6772821,6773059-6773258,
           6773367-6773561,6773650-6773812
          Length = 574

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 307 LLPTATFPKSDPIIVRTSDTLLYALKNSSGI 399
           L+P  T P    + V T+ TLL+A++N+S I
Sbjct: 428 LIPEVTVPVWGVVYVPTTITLLHAIRNTSSI 458


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,907,978
Number of Sequences: 37544
Number of extensions: 491846
Number of successful extensions: 1248
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)