Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_H01
(917 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132847-5|CAB60384.2| 280|Caenorhabditis elegans Hypothetical ... 34 0.16
AL110500-23|CAB63414.1| 280|Caenorhabditis elegans Hypothetical... 34 0.16
Z81512-4|CAB04170.1| 550|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z81109-10|CAB03242.2| 290|Caenorhabditis elegans Hypothetical p... 31 1.5
AF099920-8|AAK29848.1| 402|Caenorhabditis elegans Hypothetical ... 30 2.7
AC006832-7|AAF39999.1| 505|Caenorhabditis elegans Hypothetical ... 29 3.5
AF067944-4|AAC17670.2| 279|Caenorhabditis elegans Hypothetical ... 29 4.7
Z69302-3|CAA93266.1| 442|Caenorhabditis elegans Hypothetical pr... 28 8.1
U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical pr... 28 8.1
>AL132847-5|CAB60384.2| 280|Caenorhabditis elegans Hypothetical
protein Y48G10A.1 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 175 FQNVGSFIRECNGTTLRYDQACLS-ILTDQEVTIWSQYAECDGCKLLPTATFPKSDPIIV 351
FQ++ +F CN T+ + Q L+ L D++ + W+QY D ++L + PK + ++
Sbjct: 167 FQSISAFAPICNPITVPWGQKALTGYLGDEDKSTWNQY---DASEVLKAYSGPKREILVD 223
Query: 352 R-TSDTLLYALK 384
+ +D L LK
Sbjct: 224 QGAADNFLAQLK 235
>AL110500-23|CAB63414.1| 280|Caenorhabditis elegans Hypothetical
protein Y48G10A.1 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 175 FQNVGSFIRECNGTTLRYDQACLS-ILTDQEVTIWSQYAECDGCKLLPTATFPKSDPIIV 351
FQ++ +F CN T+ + Q L+ L D++ + W+QY D ++L + PK + ++
Sbjct: 167 FQSISAFAPICNPITVPWGQKALTGYLGDEDKSTWNQY---DASEVLKAYSGPKREILVD 223
Query: 352 R-TSDTLLYALK 384
+ +D L LK
Sbjct: 224 QGAADNFLAQLK 235
>Z81512-4|CAB04170.1| 550|Caenorhabditis elegans Hypothetical
protein F25C8.4 protein.
Length = 550
Score = 32.7 bits (71), Expect = 0.38
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 325 FPKSDPIIVRTSDTLLYALKNSSGIICKGSYQFGEYGQYVFNLTEGAK-NKCLPRMTAEP 501
F SDP+ + D L+ L IIC GS F + +L AK N LP++ +
Sbjct: 117 FVFSDPLGLHEIDKLMKTLNREYRIICTGSRDFANGYPIIEDLAFAAKQNLPLPKIEPDT 176
Query: 502 DAAY 513
D Y
Sbjct: 177 DIVY 180
>Z81109-10|CAB03242.2| 290|Caenorhabditis elegans Hypothetical
protein R10D12.4 protein.
Length = 290
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -3
Query: 378 SVEQSVGGADYNRIRLRERCCWQQFAPITLRILAPYSNFLI 256
SVEQS+ + ++R RER QFA +++ + +++F +
Sbjct: 204 SVEQSIDSKHFQKLRARERSVAVQFALVSIFSIISFASFKV 244
>AF099920-8|AAK29848.1| 402|Caenorhabditis elegans Hypothetical
protein H06H21.9 protein.
Length = 402
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 187 GSFIRECNGTTLRYDQACLSILTDQEVTIWSQYAECDGCKLLPTATFPKSDPI 345
G I + NGTT+ +D+ L+ D+ S + K PT T PK++P+
Sbjct: 98 GDIILQVNGTTVSFDEKQLTEHVDETTGGASLQSNVKTVKRKPTTT-PKTEPV 149
>AC006832-7|AAF39999.1| 505|Caenorhabditis elegans Hypothetical
protein ZK355.5 protein.
Length = 505
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 390 QWNNMQRILSVRRIWTIRFQSHRGRKEQMPAPHDGGTGRRL 512
QWNN+ + ++ + TI + RGRK+ + HD +RL
Sbjct: 241 QWNNITGLFFLKSLTTILSTNGRGRKKVIVNIHDNYEMKRL 281
>AF067944-4|AAC17670.2| 279|Caenorhabditis elegans Hypothetical
protein K10C9.3 protein.
Length = 279
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 175 FQNVGSFIRECNGTTLRYDQACLSILTDQEVTIW 276
F+N GS+ + C GT +D+ + + D+ V +W
Sbjct: 66 FEN-GSYPQNCRGTPRHFDENLIKSIEDRLVVVW 98
>Z69302-3|CAA93266.1| 442|Caenorhabditis elegans Hypothetical
protein F40F8.8 protein.
Length = 442
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 321 CCWQ-QFAPITLRILAPYSNFLIGQNTQTRLVVTQRSTIALS 199
CCW Q + LRI+ + ++ G+N + R + R + A S
Sbjct: 168 CCWCCQRGALALRIILERTAYVCGENIRVRAQIENRQSTAQS 209
>U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical
protein T19D7.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 306 FAPITLRILAPYSNFLIGQNTQTRLVVTQRSTIALSN 196
F P L ++ P+ + L+G TR ++ S I LSN
Sbjct: 380 FFPALLFLIPPWLSLLLGPMAITRCIILMTSLILLSN 416
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,445,980
Number of Sequences: 27780
Number of extensions: 393549
Number of successful extensions: 895
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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