Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_G24
         (939 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical ...   207   8e-54
Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical pr...    32   0.51 
AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical ...    31   0.90 
Z81522-2|CAB04238.1|  415|Caenorhabditis elegans Hypothetical pr...    29   6.3  
Z81545-5|CAB04440.1|  389|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8a protein.
          Length = 319

 Score =  207 bits (506), Expect = 8e-54
 Identities = 101/161 (62%), Positives = 125/161 (77%)
 Frame = +2

Query: 284 MSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKD 463
           MS L+QLK  S VVADTGDF A+KE++PTDATTNPSLIL+A+ MEQY  ++D+++ Y K+
Sbjct: 1   MSVLEQLKGASVVVADTGDFNAIKEFQPTDATTNPSLILAASKMEQYAALIDQSVAYAKE 60

Query: 464 NGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFAE 643
           + S  +E +   +D L V+FG EILK IPGRVS EVDARLSFD  ASI +A+  I  + +
Sbjct: 61  HASGHQEVLQAAMDRLFVVFGKEILKTIPGRVSTEVDARLSFDTQASIDRALGLIAQYEK 120

Query: 644 HGIKKERILIKLASTWEGIQAAKXLEKKHGIHCNLTLLVLF 766
            GI K+RILIKLASTWEGI+AAK LE KHGIHCN+TLL  F
Sbjct: 121 EGISKDRILIKLASTWEGIRAAKFLESKHGIHCNMTLLFNF 161



 Score = 31.5 bits (68), Expect = 0.90
 Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = +1

Query: 799 SLISPFVGRILDWXVDLPRXLXRARK--PGV 885
           +LISPFVGRI+DW V         RK  PGV
Sbjct: 173 TLISPFVGRIMDWFVKNTDQKAYTRKDDPGV 203


>Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical
           protein C33D9.8 protein.
          Length = 604

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +2

Query: 461 DNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSV-EVDARLSFDKDASIAKAIKFINLF 637
           D  S++ E++ E    ++++      +    +V + E  A+L+ +KD  I K  + I L 
Sbjct: 218 DPSSTMNEELTELRSQMNLIIEYNEKQETVWQVKLSEASAQLN-EKDLVIEKITRKIELL 276

Query: 638 AEHGIKKERILIKLASTWEGIQAAKXLEK 724
            E+ +KK++ + +L   +E     K L+K
Sbjct: 277 QENNVKKDQRIYELEQCFESEDYCKILQK 305


>AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8b protein.
          Length = 165

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = +1

Query: 799 SLISPFVGRILDWXVDLPRXLXRARK--PGV 885
           +LISPFVGRI+DW V         RK  PGV
Sbjct: 19  TLISPFVGRIMDWFVKNTDQKAYTRKDDPGV 49


>Z81522-2|CAB04238.1|  415|Caenorhabditis elegans Hypothetical
           protein F32B4.1 protein.
          Length = 415

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 733 NPL*SYTVGPLCTKLLPVLKQCSLISPFVGRILDWXVDLP 852
           NP+    V P+  K L  LK C   S   G++ D+   LP
Sbjct: 40  NPIFQQQVIPVADKKLEFLKNCGCKSTVTGKLYDFCYKLP 79


>Z81545-5|CAB04440.1|  389|Caenorhabditis elegans Hypothetical
           protein F49H6.5 protein.
          Length = 389

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
 Frame = +2

Query: 590 DKDASIAKAIKFINLFAEHGIKKER-------ILIKLASTWEGIQAAKXLEKKHGIHCNL 748
           DK  S ++ ++ + LFA HG+ K R       I   L    EGI +   + K+ GI  N 
Sbjct: 103 DKMLSNSEVLRLVKLFAAHGVDKVRLTGGEPTIRNDLVQIVEGISSTPGI-KEVGITTNG 161

Query: 749 TLLVLFVP 772
            +L  F+P
Sbjct: 162 LVLPRFLP 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,113,226
Number of Sequences: 27780
Number of extensions: 395348
Number of successful extensions: 976
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)