Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_G22
         (934 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021662-1|AAH21662.1|  500|Homo sapiens hypothetical protein FL...   111   4e-24
AK025681-1|BAB15214.1|  463|Homo sapiens protein ( Homo sapiens ...    57   8e-08

>BC021662-1|AAH21662.1|  500|Homo sapiens hypothetical protein
           FLJ22028 protein.
          Length = 500

 Score =  111 bits (267), Expect = 4e-24
 Identities = 51/85 (60%), Positives = 67/85 (78%)
 Frame = +1

Query: 52  DFLFLNLFTHCTXLFGYRVILLGKYNGQGLGTDYEILLRTTPNVEYIKFVLKDGKLQGAI 231
           DF F  LF H T  F Y+V+LLGKYN QGLG+D+E++LR T   EYIK V+++G++ GA+
Sbjct: 402 DFSF-ELFAHVTKFFNYKVVLLGKYNAQGLGSDHELMLRCTKGREYIKVVMQNGRMMGAV 460

Query: 232 LIGETDLEEMCENLILDQIDLSPFG 306
           LIGETDLEE  ENLIL+Q++LS +G
Sbjct: 461 LIGETDLEETFENLILNQMNLSSYG 485


>AK025681-1|BAB15214.1|  463|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22028 fis, clone HEP08589. ).
          Length = 463

 Score = 57.2 bits (132), Expect = 8e-08
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +1

Query: 52  DFLFLNLFTHCTXLFGYRVILLGKYNGQGLGTDYEILLRTT 174
           DF F  LF H T  F Y+V+LLGKYN QGLG+D+E++LR T
Sbjct: 402 DFSF-ELFAHVTKFFNYKVVLLGKYNAQGLGSDHELMLRCT 441


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,416,560
Number of Sequences: 237096
Number of extensions: 1057785
Number of successful extensions: 1357
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12214492840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)