Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_G21
(903 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 78 1e-15
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 62 1e-10
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 55 1e-08
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 47 3e-06
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 45 2e-05
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 44 4e-05
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 34 0.024
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 31 0.17
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 31 0.22
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 30 0.52
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 27 2.8
SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|... 26 8.4
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 78.2 bits (184), Expect = 1e-15
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Frame = +3
Query: 285 RNRLEDPEKKKASELKAKTTISLDNEENTTKVS-ESAIERAMKLKGAGNRAFHAGEYDKA 461
+ + ++ +K KA ++ + + EE+ ++ E + A +LK GN+A+ EY A
Sbjct: 111 KKKKKNKKKVKAKKVGDSSVDKIATEESVKSMTKEERAKLAAELKTLGNKAYGQKEYANA 170
Query: 462 IALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFALKLNEKYVKAFLRR 641
I Y +AI C D P+ F+ NR+ACY +EQV +D + AL L+ YVKA RR
Sbjct: 171 IDYYTQAI-TCSHD-PI----FFSNRAACYAAIGDFEQVIKDTSEALSLDSSYVKALNRR 224
Query: 642 SRAAEKSGDLVLALEDVTSACILE 713
S A E+ G L AL D T +CI +
Sbjct: 225 SAAYEQLGKLDEALMDSTVSCIFD 248
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 62.1 bits (144), Expect = 1e-10
Identities = 41/109 (37%), Positives = 56/109 (51%)
Frame = +3
Query: 360 EENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNR 539
E++T V++ E A KLK GN A A +Y KA+ LY +AIE P PV +Y NR
Sbjct: 72 EDSTAHVNK---EEAEKLKLEGNNAIAAKDYQKALDLYTKAIEI-DPTSPV----YYSNR 123
Query: 540 SACYEKREMWEQVKEDCTFALKLNEKYVKAFLRRSRAAEKSGDLVLALE 686
+A Y + +E ED L L+ + +AF R RA GD A +
Sbjct: 124 AAAYNQLGQFENAVEDALTCLSLDPHHARAFGRLGRAKLSLGDAAAAAD 172
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 55.2 bits (127), Expect = 1e-08
Identities = 36/125 (28%), Positives = 55/125 (44%)
Frame = +3
Query: 345 ISLDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLAT 524
+ LD + T K + + K GN F G Y A Y+EA++ PD +A
Sbjct: 204 LKLDPDCTTAKTLFKQVRKLENTKNQGNDLFRQGNYQDAYEKYSEALQI-DPDNKETVAK 262
Query: 525 FYQNRSACYEKREMWEQVKEDCTFALKLNEKYVKAFLRRSRAAEKSGDLVLALEDVTSAC 704
Y NR+ + + E+ D AL ++ Y+K R++A E A+ DV SA
Sbjct: 263 LYMNRATVLLRLKRPEEALSDSDNALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAI 322
Query: 705 ILERS 719
L+ S
Sbjct: 323 ELDAS 327
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 47.2 bits (107), Expect = 3e-06
Identities = 26/85 (30%), Positives = 42/85 (49%)
Frame = +3
Query: 396 ERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQ 575
E A + GN F + Y A Y +A+ D+ +++A Y NR+AC E + Q
Sbjct: 62 EVAQNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIAC-YSNRAACNLLFENYRQ 120
Query: 576 VKEDCTFALKLNEKYVKAFLRRSRA 650
V DC L+ + + KA+ R ++A
Sbjct: 121 VLNDCAQVLQRDSTHAKAYYRSAKA 145
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 44.8 bits (101), Expect = 2e-05
Identities = 28/90 (31%), Positives = 40/90 (44%)
Frame = +3
Query: 402 AMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVK 581
A +LK GN AF +Y AI + +AI + Y NRSACY + +
Sbjct: 2 AEELKAKGNAAFSKKDYKTAIDYFTQAIGLDERNH-----ILYSNRSACYASEKDYADAL 56
Query: 582 EDCTFALKLNEKYVKAFLRRSRAAEKSGDL 671
+D T +L + K + R+ A GDL
Sbjct: 57 KDATKCTELKPDWAKGWSRKGAALHGLGDL 86
Score = 42.7 bits (96), Expect = 7e-05
Identities = 24/85 (28%), Positives = 44/85 (51%)
Frame = +3
Query: 396 ERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQ 575
++A + + GN F +G++ AI Y E + P D + NR+A Y K +
Sbjct: 397 DKAEESRVKGNELFKSGDFANAIKEYTEMTKRAPSD-----PRGFGNRAAAYLKVMAPAE 451
Query: 576 VKEDCTFALKLNEKYVKAFLRRSRA 650
DC A++L+ + KA++R+++A
Sbjct: 452 CIRDCNKAIELDPNFAKAYVRKAQA 476
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 43.6 bits (98), Expect = 4e-05
Identities = 27/85 (31%), Positives = 43/85 (50%)
Frame = +3
Query: 396 ERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQ 575
+ A++LK N+ G +AI LY +AIE + A Y NRS + K E +
Sbjct: 3 KEALELKNEANKFLKEGHIVQAIDLYTKAIELDSTN-----AILYSNRSLAHLKSEDYGL 57
Query: 576 VKEDCTFALKLNEKYVKAFLRRSRA 650
D + A++ + +Y KA+ RR+ A
Sbjct: 58 AINDASKAIECDPEYAKAYFRRATA 82
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 34.3 bits (75), Expect = 0.024
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = +3
Query: 408 KLKGAGNRAFHAGEYDKAIALYNEAIEA----CPPDRPV----DLATFYQNRSACYEKRE 563
K+K N AF +Y++A LY A++ C + + + + NR+A
Sbjct: 64 KMKQTANEAFKRKKYEEAKKLYGLALQLALNRCTWEPSILTREEASVMLCNRAAAEIALS 123
Query: 564 MWEQVKEDCTFALKLNEKYVKAFLRRSRAAEKSGDLVLALEDVTSACIL 710
+ + D ALK+ Y K + R+++A E + A + V IL
Sbjct: 124 QFPEALADANAALKIRNNYGKCYYRKAKALEAMHRIEEAKQVVRDGLIL 172
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 384 ESAIERAMKLKGAGNRAFHAGEYDKAIALYNEAI 485
ES+ E A++ G + +AGEYDKA+ N+++
Sbjct: 2 ESSREEALRCIGLARKYLNAGEYDKALKFANKSL 35
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +3
Query: 447 EYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFALKLNEKYVK 626
E + I +++E + A + + Y + S + +++ + +V DCT+AL +N K
Sbjct: 19 ENTREIDVFDEFLNAIGNENTI--TPVYADSSLTHLRKKSYTKVVHDCTYALVINPYDKK 76
Query: 627 AFLRRSRAAEKSGDLVLALED 689
RR A + G LA D
Sbjct: 77 VIWRRGLAYLRLGHPHLANRD 97
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +3
Query: 447 EYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFALKLNEKYVK 626
+++ A+ + IE P+ +DL ++ R+ YEK + Q + D + LN + +
Sbjct: 21 KFEDALTFITKTIEQ-EPNPTIDL---FELRAQVYEKSGQYSQAELDAKRMIHLNARNAR 76
Query: 627 AFLRRSRAAEKSG 665
+LR + + G
Sbjct: 77 GYLRLGKLLQLDG 89
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 450 YDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFALK 605
+D+A YN A+ A PP++ +L + NRS ++ ++ E F L+
Sbjct: 221 WDQADYCYNRAVSAKPPNKS-ELKKYIWNRSVLNKEHGSLKKAAEGFKFLLQ 271
>SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|chr
1|||Manual
Length = 402
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 472 TMKQLKHAPQTVLSILLHFTKTALLVMKNE 561
T LK+A V + L HF ++ +V++NE
Sbjct: 111 TQNNLKYALSYVTNALFHFDNSSHMVIRNE 140
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,351,261
Number of Sequences: 5004
Number of extensions: 67070
Number of successful extensions: 219
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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