Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_G21
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M98552-9|AAA28210.3| 569|Caenorhabditis elegans Hypothetical pr... 63 3e-10
U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated p... 60 2e-09
AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45 protein. 60 2e-09
AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical ... 58 1e-08
AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical ... 51 1e-06
Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical pr... 50 3e-06
Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical pr... 50 3e-06
U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small glutamine... 49 5e-06
U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of hsp70... 42 6e-04
AF303269-1|AAG50227.1| 266|Caenorhabditis elegans Hsp70-interac... 42 6e-04
U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical pr... 36 0.040
AF016449-15|AAG24002.1| 496|Caenorhabditis elegans Cytochrome p... 33 0.28
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 31 1.1
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 31 1.1
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 31 1.1
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 31 1.1
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 31 1.5
U40060-5|AAA81143.2| 690|Caenorhabditis elegans Hypothetical pr... 31 1.5
U29488-9|AAA68778.1| 342|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical p... 30 2.6
Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical p... 30 2.6
Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 29 4.5
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 29 4.5
>M98552-9|AAA28210.3| 569|Caenorhabditis elegans Hypothetical
protein ZK370.8 protein.
Length = 569
Score = 62.9 bits (146), Expect = 3e-10
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Frame = +3
Query: 387 SAIERAMK-LKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDL-ATFYQNRSACYEK- 557
S +ER ++ +K GN F +YD A+ + + +E P+ + A YQNR+AC EK
Sbjct: 38 SDLERDLEEIKALGNLKFKEKQYDSALEAFTKGVEKAGPNSSDQIVAMLYQNRAACREKV 97
Query: 558 REMWEQVKEDCTFALKLNEKYVKAFLRRSRAAEKSGDLVLALEDVTSACILERS 719
+ DC ALK+++KY KA+LR ++A G AL + +A L+ S
Sbjct: 98 GHSPFDILNDCMAALKVDKKYTKAYLRAAKALNDVGKKQDALAYLLAAFTLDSS 151
>U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated
protein 45 protein.
Length = 961
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/103 (33%), Positives = 54/103 (52%)
Frame = +3
Query: 393 IERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWE 572
++ A +++ GN A +Y KA LY EA++ + Y+NR+ KR+ +E
Sbjct: 5 VQTAEEIRDEGNAAVKDQDYIKADELYTEALQLTTDEDKALRPVLYRNRAMARLKRDDFE 64
Query: 573 QVKEDCTFALKLNEKYVKAFLRRSRAAEKSGDLVLALEDVTSA 701
+ DCT AL+ + VKA RRS A E+ G++ A +D A
Sbjct: 65 GAQSDCTKALEFDGADVKALFRRSLAREQLGNVGPAFQDAKEA 107
>AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45 protein.
Length = 961
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/103 (33%), Positives = 54/103 (52%)
Frame = +3
Query: 393 IERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWE 572
++ A +++ GN A +Y KA LY EA++ + Y+NR+ KR+ +E
Sbjct: 5 VQTAEEIRDEGNAAVKDQDYIKADELYTEALQLTTDEDKALRPVLYRNRAMARLKRDDFE 64
Query: 573 QVKEDCTFALKLNEKYVKAFLRRSRAAEKSGDLVLALEDVTSA 701
+ DCT AL+ + VKA RRS A E+ G++ A +D A
Sbjct: 65 GAQSDCTKALEFDGADVKALFRRSLAREQLGNVGPAFQDAKEA 107
>AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical
protein R09E12.3 protein.
Length = 320
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +3
Query: 396 ERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQ 575
E A + K GN F G+Y A+ YNEA++ P + A Y NR+AC K +++
Sbjct: 138 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN-----AILYSNRAACLTKLMEFQR 192
Query: 576 VKEDCTFALKLNEKYVKAFLRRS 644
+DC ++L+ K++K ++R++
Sbjct: 193 ALDDCDTCIRLDSKFIKGYIRKA 215
>AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical
protein Y39B6A.2 protein.
Length = 496
Score = 54.4 bits (125), Expect = 1e-07
Identities = 37/105 (35%), Positives = 49/105 (46%)
Frame = +3
Query: 375 KVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYE 554
K E E+A +K N+ F YD A LY+ AIE P A Y NR+ Y
Sbjct: 20 KSYEDEKEKAGMIKDEANQFFKDQVYDVAADLYSVAIEIHPT------AVLYGNRAQAYL 73
Query: 555 KREMWEQVKEDCTFALKLNEKYVKAFLRRSRAAEKSGDLVLALED 689
K+E++ ED A+ ++ YVK F RR+ A G AL D
Sbjct: 74 KKELYGSALEDADNAIAIDPSYVKGFYRRATANMALGRFKKALTD 118
>AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical
protein C34B2.5 protein.
Length = 207
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/89 (32%), Positives = 41/89 (46%)
Frame = +3
Query: 384 ESAIERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKRE 563
E I + LK GN F GE++KA Y EAI +CPP + N +A K
Sbjct: 12 EDQITKVDSLKKEGNNFFANGEFEKANEKYQEAIASCPPTSTEVQSILLSNSAAALIKLR 71
Query: 564 MWEQVKEDCTFALKLNEKYVKAFLRRSRA 650
WE E + ++++ KA RR+ A
Sbjct: 72 KWESAVEAASKSIEIGATNEKALERRAFA 100
>Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/137 (24%), Positives = 61/137 (44%)
Frame = +3
Query: 303 PEKKKASELKAKTTISLDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEA 482
P+ ++ + ++L ++ + +E IE+A + +G AF G++D A+ + A
Sbjct: 82 PKIDNEGVIEPEEAVALPMGDSAKEATEDEIEKASEERGKAQEAFSNGDFDTALTHFTAA 141
Query: 483 IEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFALKLNEKYVKAFLRRSRAAEKS 662
IEA P A + R+ K + DC A+ +N + + R RA
Sbjct: 142 IEANPGS-----AMLHAKRANVLLKLKRPVAAIADCDKAISINPDSAQGYKFRGRANRLL 196
Query: 663 GDLVLALEDVTSACILE 713
G V A D+ +AC L+
Sbjct: 197 GKWVEAKTDLATACKLD 213
>Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/137 (24%), Positives = 61/137 (44%)
Frame = +3
Query: 303 PEKKKASELKAKTTISLDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEA 482
P+ ++ + ++L ++ + +E IE+A + +G AF G++D A+ + A
Sbjct: 82 PKIDNEGVIEPEEAVALPMGDSAKEATEDEIEKASEERGKAQEAFSNGDFDTALTHFTAA 141
Query: 483 IEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFALKLNEKYVKAFLRRSRAAEKS 662
IEA P A + R+ K + DC A+ +N + + R RA
Sbjct: 142 IEANPGS-----AMLHAKRANVLLKLKRPVAAIADCDKAISINPDSAQGYKFRGRANRLL 196
Query: 663 GDLVLALEDVTSACILE 713
G V A D+ +AC L+
Sbjct: 197 GKWVEAKTDLATACKLD 213
>U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small
glutamine-rich tetratricorepeat protein protein 1
protein.
Length = 337
Score = 48.8 bits (111), Expect = 5e-06
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +3
Query: 381 SESAIERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKR 560
S+S I +A KLK GN A +++ A+ YN AI+ PV ++ NR+A Y +
Sbjct: 98 SDSDISQANKLKEEGNDLMKASQFEAAVQKYNAAIKL--NRDPV----YFCNRAAAYCRL 151
Query: 561 EMWEQVKEDCTFALKLNEKYVKAFLRRSRA 650
E ++ +DC AL L+ Y KA+ R A
Sbjct: 152 EQYDLAIQDCRTALALDPSYSKAWGRMGLA 181
>U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical
protein C33H5.8 protein.
Length = 297
Score = 45.2 bits (102), Expect = 6e-05
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +3
Query: 402 AMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVK 581
A +LK GN AF +Y KA+ +Y++++E P P+ + NR+ ++ +
Sbjct: 8 AQRLKEQGNEAFKKKKYHKAMTIYSKSLEHWPD--PI----VFSNRAQAGLNADLPLLAQ 61
Query: 582 EDCTFALKLNEKYVKAFLRRSRA 650
DCT AL L+ KA+ RR++A
Sbjct: 62 IDCTAALNLDSTAAKAYYRRAQA 84
>U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of
hsp70-interacting protein(chip family) protein 1
protein.
Length = 266
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = +3
Query: 423 GNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFAL 602
G + + YD A+ Y++AI+ P L +YQNR+ CY + + +EDC AL
Sbjct: 12 GKKCYMNKRYDDAVDHYSKAIKVNP------LPKYYQNRAMCYFQLNNLKMTEEDCKRAL 65
Query: 603 KLNEKYVK 626
+L+ VK
Sbjct: 66 ELSPNEVK 73
>AF303269-1|AAG50227.1| 266|Caenorhabditis elegans
Hsp70-interacting protein protein.
Length = 266
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = +3
Query: 423 GNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFAL 602
G + + YD A+ Y++AI+ P L +YQNR+ CY + + +EDC AL
Sbjct: 12 GKKCYMNKRYDDAVDHYSKAIKVNP------LPKYYQNRAMCYFQLNNLKMTEEDCKRAL 65
Query: 603 KLNEKYVK 626
+L+ VK
Sbjct: 66 ELSPNEVK 73
>U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical
protein C17G10.2 protein.
Length = 419
Score = 35.9 bits (79), Expect = 0.040
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +3
Query: 414 KGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCT 593
K GN+ F +Y A Y+ I+ PDR ++ A Y NR+A + +DC+
Sbjct: 99 KEEGNKHFKFKKYRWATDCYSNGIKENSPDRKLN-AVLYFNRAAAQKHLGNLRSAIKDCS 157
Query: 594 FALKLNEKYVKAFLR 638
K + ++K +R
Sbjct: 158 MGRKFDPTHLKGVIR 172
>AF016449-15|AAG24002.1| 496|Caenorhabditis elegans Cytochrome p450
family protein 33C9 protein.
Length = 496
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 570 EQVKEDCTFALKLNEKYVKAFLRRSRAAEKSGDL-VLALEDVTSACI 707
E K++ F L+ N YV+AFL+ R E SGD + + +++ C+
Sbjct: 250 ENHKKEIDFELEENSDYVEAFLKEQRKREASGDFESFSTKQLSNMCL 296
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = -1
Query: 495 GMLQLLHCIKQWL---CHILQHEKPGYQHLLVSWRVLWHFRI 379
G LQ+L +K+ L CH LQH + +Q ++ ++RV +H R+
Sbjct: 2048 GHLQILSHVKKILIEECHNLQHVQHVFQMVVRNYRVYYHVRL 2089
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = -1
Query: 495 GMLQLLHCIKQWL---CHILQHEKPGYQHLLVSWRVLWHFRI 379
G LQ+L +K+ L CH LQH + +Q ++ ++RV +H R+
Sbjct: 2054 GHLQILSHVKKILIEECHNLQHVQHVFQMVVRNYRVYYHVRL 2095
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = -1
Query: 495 GMLQLLHCIKQWL---CHILQHEKPGYQHLLVSWRVLWHFRI 379
G LQ+L +K+ L CH LQH + +Q ++ ++RV +H R+
Sbjct: 2054 GHLQILSHVKKILIEECHNLQHVQHVFQMVVRNYRVYYHVRL 2095
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = -1
Query: 495 GMLQLLHCIKQWL---CHILQHEKPGYQHLLVSWRVLWHFRI 379
G LQ+L +K+ L CH LQH + +Q ++ ++RV +H R+
Sbjct: 2054 GHLQILSHVKKILIEECHNLQHVQHVFQMVVRNYRVYYHVRL 2095
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 378 VSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEAIE 488
+S A+++A++L AG YD+A+ LY++AIE
Sbjct: 1 MSVPALQKAIELVTKATEEDTAGRYDQALRLYDQAIE 37
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 30.7 bits (66), Expect = 1.5
Identities = 29/131 (22%), Positives = 52/131 (39%)
Frame = +3
Query: 315 KASELKAKTTISLDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEAIEAC 494
+A+E ++ D+ N + + IE+ +L+ A+ G+ N IE
Sbjct: 111 EAAEADFNIVLNHDSSNNDVQEKTALIEQHRQLRHQIKSAYAGGDCATVEEYINHIIEIQ 170
Query: 495 PPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFALKLNEKYVKAFLRRSRAAEKSGDLV 674
D A+ Y+ R+ C E+R ++ D KL+ S+ GDL
Sbjct: 171 VWD-----ASLYRMRAKCLEERGELKKAIHDMRIVSKLSTDSTDTMFETSKLLYTVGDLE 225
Query: 675 LALEDVTSACI 707
+L +V C+
Sbjct: 226 ESL-NVIRECL 235
>U40060-5|AAA81143.2| 690|Caenorhabditis elegans Hypothetical
protein F38B6.6 protein.
Length = 690
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +3
Query: 441 AGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFALKLNEKY 620
+GE+ ++LY+ + CP + A + N + + +++ A+KL+ Y
Sbjct: 411 SGEWKTELSLYSSGLSVCPTN-----AKIHYNLGKVLGDNGLTKDAEKNYWNAIKLDPSY 465
Query: 621 VKAFLRRSRAAEKSGD 668
+A EKSGD
Sbjct: 466 EQALNNLGNLLEKSGD 481
>U29488-9|AAA68778.1| 342|Caenorhabditis elegans Hypothetical
protein C56C10.10 protein.
Length = 342
Score = 30.3 bits (65), Expect = 2.0
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Frame = +3
Query: 411 LKGAGNRAFHAGEYDKAIALYNEAIEACP-------PDRP--VDL----ATFYQNRSACY 551
L+ GN F +Y +AI Y +A+ P P V+L Y N S CY
Sbjct: 194 LRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCY 253
Query: 552 EKREMWEQVKEDCTFALKLNEKYVKAFLRRSRAAEKSGDLVLALEDV 692
+ +E + LK E KA RR++A + L A ED+
Sbjct: 254 LNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDL 300
>Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 576 VKEDCTFALKLNEKYVKAFLRRSRAAEKSG 665
V+E C F L LNE+ K +R S A SG
Sbjct: 236 VEESCQFDLGLNEEQTKEMIRISTTASSSG 265
>Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 576 VKEDCTFALKLNEKYVKAFLRRSRAAEKSG 665
V+E C F L LNE+ K +R S A SG
Sbjct: 277 VEESCQFDLGLNEEQTKEMIRISTTASSSG 306
>Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 576 VKEDCTFALKLNEKYVKAFLRRSRAAEKSG 665
V+E C F L LNE+ K +R S A SG
Sbjct: 236 VEESCQFDLGLNEEQTKEMIRISTTASSSG 265
>Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 576 VKEDCTFALKLNEKYVKAFLRRSRAAEKSG 665
V+E C F L LNE+ K +R S A SG
Sbjct: 277 VEESCQFDLGLNEEQTKEMIRISTTASSSG 306
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical protein
K08E7.9 protein.
Length = 1321
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 192 MASTGSTPFPKWQLAILLGAPIAIGLGYLYLR-NRLEDPEKKKASELKAKTTISLDNEEN 368
+A G F WQ+A+L+ A + I YLR R K ASE I+++ EN
Sbjct: 885 VAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIEN 944
Query: 369 TTKVSESAIE 398
V A E
Sbjct: 945 VRTVQALARE 954
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 192 MASTGSTPFPKWQLAILLGAPIAIGLGYLYLR-NRLEDPEKKKASELKAKTTISLDNEEN 368
+A G F WQ+A+L+ A + I YLR R K ASE I+++ EN
Sbjct: 885 VAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIEN 944
Query: 369 TTKVSESAIE 398
V A E
Sbjct: 945 VRTVQALARE 954
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,688,835
Number of Sequences: 27780
Number of extensions: 383561
Number of successful extensions: 1072
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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