Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_G19
(1017 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 34 0.16
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.49
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.64
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 32 0.85
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 31 1.1
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 31 1.5
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.9
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 31 2.0
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 31 2.0
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 30 3.4
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 29 6.0
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 6.0
SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26) 29 6.0
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 6.0
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 29 7.9
SB_58757| Best HMM Match : GRP (HMM E-Value=0.0041) 29 7.9
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
PP P PPP P P PPP S P P P P PP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 34.3 bits (75), Expect = 0.16
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXP 740
PPQ P PPP P P PPP P P P C P
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALRLACAPP 441
Score = 33.9 bits (74), Expect = 0.21
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
PP P PPP P P PPP P P P P PP
Sbjct: 391 PPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALRLACAPP 441
Score = 33.5 bits (73), Expect = 0.28
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
PP P PPP P P PPP P P P P PP
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 32.7 bits (71), Expect = 0.49
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
PP P PPP P P PPP P P P P PP
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 32.7 bits (71), Expect = 0.49
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
PP P PPP P P PPP P P P P PP
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 32.3 bits (70), Expect = 0.64
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
PP P PPP P P PPP P P P P PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415
Score = 32.3 bits (70), Expect = 0.64
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
PP P PPP P P PPP P P P P PP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPR 689
PP P PP P P PPP C PR
Sbjct: 410 PPPPPPPPPAPPPPPPPPPPPPPALRLACAPPR 442
Score = 29.9 bits (64), Expect = 3.4
Identities = 19/68 (27%), Positives = 19/68 (27%)
Frame = +2
Query: 596 PXXPAXPPXXXXSXPXTPSXIXXXSXLXXXPPLXXXPXXPRXXXLRXAPRPPXXGXLVHP 775
P P PP S P P PP P P P PP P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Query: 776 XPP*XXPP 799
PP PP
Sbjct: 425 PPPPPPPP 432
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
PP P PP P P PPP P P P P PP
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 594 PQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
P P PPP P P PPP P P P P PP
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.7 bits (71), Expect = 0.49
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
PP PPP P PPP GP P P P G PP
Sbjct: 358 PPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPP 408
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXG 728
PP PPP P PPP GP P P P G
Sbjct: 368 PPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNG 413
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.3 bits (70), Expect = 0.64
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +3
Query: 606 PRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPPG 746
P PPP P P PPP P P P P G PPG
Sbjct: 922 PPPPPGGNAPLPPPPP-GGSAPSQPPPPGGNAPPPPPPPGGSAPPPG 967
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 31.9 bits (69), Expect = 0.85
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 585 AXPPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXP 686
A PP P PPP P P PPP P P
Sbjct: 463 APPPPPPPPPPPPPPPPPPPPPPPPFPPPPPPTP 496
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 579 VXAXPPQXXPRPPPXXXIPXPXPPPXSXXGP 671
V PP P PPP P P PPP P
Sbjct: 460 VGQAPPPPPPPPPPPPPPPPPPPPPPPPFPP 490
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXP 686
PP PRPPP P P PPP S P P
Sbjct: 204 PPPPPPRPPPS---PPPPPPPPSPSPPRPPPP 232
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
PP P PPP P PPP P P P PP
Sbjct: 211 PPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPPTLPPP 261
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPPGXLXXXXLS 770
PP P PPP P PPP P C P P G PP
Sbjct: 694 PPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQ-PGCAGLPPPPPPPPPGCAG 752
Query: 771 TPXP 782
P P
Sbjct: 753 LPPP 756
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 27.9 bits (59), Expect(2) = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 585 AXPPQXXPRPPPXXXIPXPXPPP 653
A PP PPP P P PPP
Sbjct: 94 ACPPACCAPPPPPPPPPPPPPPP 116
Score = 21.4 bits (43), Expect(2) = 1.9
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +3
Query: 633 PXPXPPPXSXXGPXC 677
P P PPP + P C
Sbjct: 139 PPPPPPPPAPCMPPC 153
>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -3
Query: 742 GGXXQPXXXGXXGXXXQXRGXXQXGPXXDXGGGXGXGXXXXGGGRGXXWGG 590
GG G + RG + G G G G G GGGRG GG
Sbjct: 137 GGEGNGAGGGIGRGGGRGRGGGEGGWGGRGGNGGGRGGGEGGGGRGRGTGG 187
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 30.7 bits (66), Expect = 2.0
Identities = 44/198 (22%), Positives = 51/198 (25%), Gaps = 4/198 (2%)
Frame = +2
Query: 218 PXGXXXKTPPPRXLXXGXGKXXXGSXXPXTXKXKKKXPSPPPXPXGXX*XFVXXXRG--X 391
P K PPP G + P + +PPP RG
Sbjct: 167 PPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQ 226
Query: 392 XXVXPPXGGXXLPL-CXCXGVXXPXPXXXNKXXXXVPPLSCLXPDLLGAGGXXXAXXXGP 568
+ PP G PL G P P PP P P
Sbjct: 227 RSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPP--------------P 272
Query: 569 XLGGRSXXXPXXPAXPPXXXXSXPXTPSXIXXXSXLXXXPPLXXXPXXPRXXXLR-XAPR 745
G S P PP + P PPL P P + P
Sbjct: 273 PKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPP 332
Query: 746 PPXXGXLVHPXPP*XXPP 799
PP G + P PP PP
Sbjct: 333 PPLRGQIAPPPPPISKPP 350
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 30.7 bits (66), Expect = 2.0
Identities = 44/198 (22%), Positives = 51/198 (25%), Gaps = 4/198 (2%)
Frame = +2
Query: 218 PXGXXXKTPPPRXLXXGXGKXXXGSXXPXTXKXKKKXPSPPPXPXGXX*XFVXXXRG--X 391
P K PPP G + P + +PPP RG
Sbjct: 79 PPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQ 138
Query: 392 XXVXPPXGGXXLPL-CXCXGVXXPXPXXXNKXXXXVPPLSCLXPDLLGAGGXXXAXXXGP 568
+ PP G PL G P P PP P P
Sbjct: 139 RSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPP--------------P 184
Query: 569 XLGGRSXXXPXXPAXPPXXXXSXPXTPSXIXXXSXLXXXPPLXXXPXXPRXXXLR-XAPR 745
G S P PP + P PPL P P + P
Sbjct: 185 PKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPP 244
Query: 746 PPXXGXLVHPXPP*XXPP 799
PP G + P PP PP
Sbjct: 245 PPLRGQIAPPPPPISKPP 262
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGP 671
PP P PPP P P PPP P
Sbjct: 1157 PPPPPPPPPPPPSSPSPPPPPPPPPPP 1183
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 30.3 bits (65), Expect = 2.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPP 653
PP P PPP P P PPP
Sbjct: 87 PPPPLPAPPPPPAQPAPQPPP 107
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +3
Query: 576 AVXAXPPQXXP--RPPPXXXIPXPXPPP 653
A A PP P PPP +P P PPP
Sbjct: 71 APAAPPPPAAPPAAPPPPPPLPAPPPPP 98
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPX--PPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPPG 746
PP P PP P P P P P P C P G PPG
Sbjct: 96 PPPATPPPPTMPPTPPPPQTPAPPGPDTPAPPAPGGCGAKPHTRIVGGTKAPPG 149
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFP 716
PP P PPP P P PP PR P P
Sbjct: 1057 PPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNP 1098
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPPG 746
PP PPP P P PP P+ P P G PPG
Sbjct: 31 PPPPYEAPPPPPGPPGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGPPG 82
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.9 bits (64), Expect = 3.4
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
PP P PPP P P PPP + P P P +P PP
Sbjct: 150 PPPNPPYPPPLYP-PPPNPPPPN--APYPPPPYPPPPNPPYPPPPNPPYPP 197
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
PP P PP P PPP P P P +P PP
Sbjct: 92 PPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPP 142
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIP--XPXPPPXS-XXGPXCXXPRXCXXXPXFPXXXGCXXPP 743
PP P PPP P P PPP + P P P +P PP
Sbjct: 168 PPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPP 221
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXP 686
PP P PPP P PPP + P P
Sbjct: 205 PPPNPPYPPPPNAPNPPYPPPPNAPNPPYPPP 236
>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2143
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 594 PQXXPRPPPXXXIPXPXPPP 653
P P PPP +P P PPP
Sbjct: 82 PPPPPPPPPASNVPAPPPPP 101
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXG 668
PP P PPP P P PPP S G
Sbjct: 867 PPPPPPPPPPPP--PPPPPPPASSTG 890
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 564 VXXLAVXAXPPQXXPRPPPXXXIPXPXPPPXSXXGP 671
+ +A P + P PPP IP P PP P
Sbjct: 541 IPAVAPAVTPSEEPPPPPPGVDIPPPLPPSEDPKPP 576
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 591 PPQXXPRPPPXXXIPXPXPPPXSXXGPXCXXPRXCXXXPXFPXXXGCXXPPG 746
PP PPP P PPP GP P P PPG
Sbjct: 348 PPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPPG 399
>SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26)
Length = 765
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 670 GPXXDXGGGXGXGXXXXGGGRGXXWGG 590
G D GGG G G GGG G GG
Sbjct: 657 GDGGDGGGGGGGGGGGGGGGGGGGGGG 683
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 715 GXXGXXXQXRGXXQXGPXXDXGGGXGXGXXXXGGGRGXXWGGXAXTA 575
G G G G GGG G G GGG G GG A A
Sbjct: 659 GGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGA 705
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 573 LAVXAXPPQXXPRPPPXXXIPXPXPPP 653
LA + PP PPP P P PPP
Sbjct: 183 LAAASPPPPSGGPPPPPPPPPPPPPPP 209
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 564 VXXLAVXAXPPQXXPRPPPXXXIPXPXPPPXSXXGP 671
V A PP P PPP P P PP P
Sbjct: 181 VPLAAASPPPPSGGPPPPPPPPPPPPPPPILELAAP 216
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 670 GPXXDXGGGXGXGXXXXGGGRGXXWGG 590
G D GGG G G GGG G GG
Sbjct: 780 GGGGDGGGGGGGGGGGGGGGGGGDGGG 806
>SB_58757| Best HMM Match : GRP (HMM E-Value=0.0041)
Length = 154
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -3
Query: 742 GGXXQPXXXGXXGXXXQXRGXXQXGPXXDXGGGXGXGXXXXGGGRGXXWGGXA 584
GG G G G G D GGG G G GGG G G A
Sbjct: 64 GGGGGGGGGGGGGGGGGGGGDDGDGGGGDGGGGGGGGDGGGGGGGGGGGVGRA 116
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,911,601
Number of Sequences: 59808
Number of extensions: 227821
Number of successful extensions: 1450
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3023635215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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