Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_G15
(955 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 39 0.005
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.008
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.008
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.008
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.011
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.011
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.011
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 36 0.056
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 36 0.056
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.056
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.075
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 34 0.13
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.23
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 33 0.23
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 33 0.40
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 33 0.40
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 33 0.40
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 33 0.40
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 33 0.40
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 32 0.53
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.70
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.70
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.92
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.2
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.6
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 30 2.1
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 30 2.1
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 30 2.1
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 30 2.8
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 30 2.8
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.7
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 3.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 3.7
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 3.7
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 29 3.7
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 3.7
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 3.7
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 29 3.7
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 29 3.7
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 29 4.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 4.9
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 29 4.9
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 4.9
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 29 6.5
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 29 6.5
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 6.5
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 6.5
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 6.5
Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 28 8.6
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 28 8.6
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 28 8.6
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 28 8.6
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 28 8.6
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 39.1 bits (87), Expect = 0.005
Identities = 32/112 (28%), Positives = 35/112 (31%), Gaps = 5/112 (4%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPG-PX*PXPPG----XGXGXTGXPPPXGGKXVSPXXGG 561
P P + GG PF G P PPG G +G PP +P GG
Sbjct: 301 PPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 360
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PG PP G P G P G P P P P P
Sbjct: 361 PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNP 412
Score = 38.3 bits (85), Expect = 0.008
Identities = 32/112 (28%), Positives = 34/112 (30%), Gaps = 5/112 (4%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPG-PX*PXPPG----XGXGXTGXPPPXGGKXVSPXXGG 561
P P GG PF G P PPG G +G PP +P GG
Sbjct: 211 PTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 270
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PG PP G P G P G P P P P P
Sbjct: 271 PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNP 322
Score = 37.9 bits (84), Expect = 0.011
Identities = 32/112 (28%), Positives = 34/112 (30%), Gaps = 5/112 (4%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPG-PX*PXPPG----XGXGXTGXPPPXGGKXVSPXXGG 561
P P GG PF G P PPG G +G PP +P GG
Sbjct: 331 PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGG 390
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PG PP G P G P G P P P P P
Sbjct: 391 PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNP 442
Score = 37.9 bits (84), Expect = 0.011
Identities = 32/112 (28%), Positives = 34/112 (30%), Gaps = 5/112 (4%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPG-PX*PXPPGX----GXGXTGXPPPXGGKXVSPXXGG 561
P P GG PF G P PPG G +G PP +P GG
Sbjct: 406 PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 465
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PG PP G P G P G P P P P P
Sbjct: 466 PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 517
Score = 37.5 bits (83), Expect = 0.014
Identities = 32/112 (28%), Positives = 34/112 (30%), Gaps = 5/112 (4%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPG-PX*PXPPG----XGXGXTGXPPPXGGKXVSPXXGG 561
P P GG PF G P PPG G +G PP +P GG
Sbjct: 391 PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 450
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PG PP G P G P G P P P P P
Sbjct: 451 PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNP 502
Score = 37.1 bits (82), Expect = 0.018
Identities = 32/112 (28%), Positives = 34/112 (30%), Gaps = 5/112 (4%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPG-PX*PXPPG----XGXGXTGXPPPXGGKXVSPXXGG 561
P P GG PF G P PPG G +G PP +P GG
Sbjct: 361 PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 420
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PG PP G P G P G P P P P P
Sbjct: 421 PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNP 472
Score = 37.1 bits (82), Expect = 0.018
Identities = 32/112 (28%), Positives = 34/112 (30%), Gaps = 5/112 (4%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPG-PX*PXPPG----XGXGXTGXPPPXGGKXVSPXXGG 561
P P GG PF G P PPG G +G PP +P GG
Sbjct: 376 PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 435
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PG PP G P G P G P P P P P
Sbjct: 436 PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 487
Score = 36.7 bits (81), Expect = 0.024
Identities = 32/112 (28%), Positives = 34/112 (30%), Gaps = 5/112 (4%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPG-PX*PXPPG----XGXGXTGXPPPXGGKXVSPXXGG 561
P P GG PF G P PPG G +G PP +P GG
Sbjct: 196 PPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 255
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PG PP G P G P G P P P P P
Sbjct: 256 PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 307
Score = 36.7 bits (81), Expect = 0.024
Identities = 28/92 (30%), Positives = 30/92 (32%), Gaps = 5/92 (5%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPG-PX*PXPPG----XGXGXTGXPPPXGGKXVSPXXGG 561
P P GG PF G P PPG G +G PP +P GG
Sbjct: 436 PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 495
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXP 657
PG PP G P G P G P
Sbjct: 496 PPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPP 527
Score = 35.9 bits (79), Expect = 0.043
Identities = 31/94 (32%), Positives = 33/94 (35%), Gaps = 9/94 (9%)
Frame = +1
Query: 436 GGXGXPFRXPG-PX*PXPPGX----GXGXTGXPPPXGGKXVSPXXGGXPGK-NPLXXXP- 594
GG PF G P PPG G +G PP G +P GG PG NP P
Sbjct: 149 GGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPS 208
Query: 595 --PKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPP 690
P G G P P G P PP
Sbjct: 209 GGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPP 242
Score = 34.3 bits (75), Expect = 0.13
Identities = 26/93 (27%), Positives = 27/93 (29%), Gaps = 1/93 (1%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPG-PX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGK 573
P P GG PF G P PPG +G PP G G P
Sbjct: 241 PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP-FDPSGAPPSGGPPGPFDPSGAPPSG 299
Query: 574 NPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLP 672
P P G P G P G P P
Sbjct: 300 GPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPP 332
Score = 33.5 bits (73), Expect = 0.23
Identities = 31/112 (27%), Positives = 33/112 (29%), Gaps = 5/112 (4%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPG-PX*PXPPG----XGXGXTGXPPPXGGKXVSPXXGG 561
P P GG PF G P PPG G +G PP + GG
Sbjct: 256 PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGG 315
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PG PP G P G P G P P P P P
Sbjct: 316 PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 367
Score = 33.5 bits (73), Expect = 0.23
Identities = 31/112 (27%), Positives = 33/112 (29%), Gaps = 5/112 (4%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*P-XPPG----XGXGXTGXPPPXGGKXVSPXXGG 561
P P GG PF G PPG G +G PP +P GG
Sbjct: 286 PPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 345
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PG PP G P G P G P P P P P
Sbjct: 346 PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 397
Score = 32.3 bits (70), Expect = 0.53
Identities = 21/74 (28%), Positives = 24/74 (32%)
Frame = +1
Query: 496 GXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPX 675
G +G PP +P GG PG PP G P G P G P P
Sbjct: 144 GAPPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPS 203
Query: 676 K*XPPXKXVXPXXP 717
+ P P P
Sbjct: 204 EAPPSGGPTGPFDP 217
Score = 29.9 bits (64), Expect = 2.8
Identities = 31/113 (27%), Positives = 33/113 (29%), Gaps = 6/113 (5%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPG-PX*PXPPGXGXGXTGXPPPXG-----GKXVSPXXG 558
P P GG F G P PPG G +G PP G +P G
Sbjct: 151 PPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGP-FGPSGAPPSGGPPGPFNPSEAPPSG 209
Query: 559 GXPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
G G PP G P G P G P P P P P
Sbjct: 210 GPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNP 262
Score = 29.9 bits (64), Expect = 2.8
Identities = 28/112 (25%), Positives = 30/112 (26%), Gaps = 5/112 (4%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXG-----GKXVSPXXGG 561
P P GG PF P +G PP G +P GG
Sbjct: 181 PPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGG 240
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PG PP G P G P G P P P P P
Sbjct: 241 PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 292
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.3 bits (85), Expect = 0.008
Identities = 30/95 (31%), Positives = 32/95 (33%), Gaps = 1/95 (1%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGX-PPPXGGKXVSPXXGGXPGK 573
P G P P GG P R P P PP G TG PPP G P G P
Sbjct: 275 PPTGSPPPP--PAGGSPPPPRAGSPP-PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Query: 574 NPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK 678
P +P G P P P + P K
Sbjct: 332 PPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGK 366
Score = 34.7 bits (76), Expect = 0.099
Identities = 36/124 (29%), Positives = 39/124 (31%), Gaps = 7/124 (5%)
Frame = +1
Query: 397 PAXGIXPXPGEXXG-----GXGXPFRXPGPX*PXPPGXGXGXTG-XPPPXGGKXVSPXXG 558
P G P P G G G P P P PP TG PPP G P G
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP-----RTGSPPPPPTGSPPPPPAG 286
Query: 559 GXPGKNPLXXXPPKGXNPKKGXXP-GVIPXGXXPXKNLPXK*XPPXKXVXPXXPXKXRXT 735
G P PP+ +P P G P G P P P P + R
Sbjct: 287 GSP-------PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 339
Query: 736 PXXS 747
P S
Sbjct: 340 PERS 343
Score = 31.9 bits (69), Expect = 0.70
Identities = 27/96 (28%), Positives = 32/96 (33%), Gaps = 1/96 (1%)
Frame = +2
Query: 464 PXPXNPRPPGXGXGXPXPPXPXXENXXPPXXGXXPXKTLXPXGXQKAXTRKKAGXRX*FP 643
P P PP G P PP PP G P +L P Q + AG P
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP--PQAGGSPPPAGTGSPPP 331
Query: 644 KARXPXKTXXKNEXPL*RXXXPTGX*XPGXPP-GXP 748
R + ++ PTG G PP G P
Sbjct: 332 PPRQKRQAPERSPP---TGSPPTGSPPTGRPPRGGP 364
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.3 bits (85), Expect = 0.008
Identities = 30/95 (31%), Positives = 32/95 (33%), Gaps = 1/95 (1%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGX-PPPXGGKXVSPXXGGXPGK 573
P G P P GG P R P P PP G TG PPP G P G P
Sbjct: 296 PPTGSPPPP--PAGGSPPPPRAGSPP-PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Query: 574 NPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK 678
P +P G P P P + P K
Sbjct: 353 PPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGK 387
Score = 34.7 bits (76), Expect = 0.099
Identities = 36/124 (29%), Positives = 39/124 (31%), Gaps = 7/124 (5%)
Frame = +1
Query: 397 PAXGIXPXPGEXXG-----GXGXPFRXPGPX*PXPPGXGXGXTG-XPPPXGGKXVSPXXG 558
P G P P G G G P P P PP TG PPP G P G
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP-----RTGSPPPPPTGSPPPPPAG 307
Query: 559 GXPGKNPLXXXPPKGXNPKKGXXP-GVIPXGXXPXKNLPXK*XPPXKXVXPXXPXKXRXT 735
G P PP+ +P P G P G P P P P + R
Sbjct: 308 GSP-------PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 360
Query: 736 PXXS 747
P S
Sbjct: 361 PERS 364
Score = 31.9 bits (69), Expect = 0.70
Identities = 27/96 (28%), Positives = 32/96 (33%), Gaps = 1/96 (1%)
Frame = +2
Query: 464 PXPXNPRPPGXGXGXPXPPXPXXENXXPPXXGXXPXKTLXPXGXQKAXTRKKAGXRX*FP 643
P P PP G P PP PP G P +L P Q + AG P
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP--PQAGGSPPPAGTGSPPP 352
Query: 644 KARXPXKTXXKNEXPL*RXXXPTGX*XPGXPP-GXP 748
R + ++ PTG G PP G P
Sbjct: 353 PPRQKRQAPERSPP---TGSPPTGSPPTGRPPRGGP 385
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.3 bits (85), Expect = 0.008
Identities = 30/95 (31%), Positives = 32/95 (33%), Gaps = 1/95 (1%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGX-PPPXGGKXVSPXXGGXPGK 573
P G P P GG P R P P PP G TG PPP G P G P
Sbjct: 281 PPTGSPPPP--PAGGSPPPPRAGSPP-PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Query: 574 NPLXXXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK 678
P +P G P P P + P K
Sbjct: 338 PPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGK 372
Score = 34.7 bits (76), Expect = 0.099
Identities = 36/124 (29%), Positives = 39/124 (31%), Gaps = 7/124 (5%)
Frame = +1
Query: 397 PAXGIXPXPGEXXG-----GXGXPFRXPGPX*PXPPGXGXGXTG-XPPPXGGKXVSPXXG 558
P G P P G G G P P P PP TG PPP G P G
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP-----RTGSPPPPPTGSPPPPPAG 292
Query: 559 GXPGKNPLXXXPPKGXNPKKGXXP-GVIPXGXXPXKNLPXK*XPPXKXVXPXXPXKXRXT 735
G P PP+ +P P G P G P P P P + R
Sbjct: 293 GSP-------PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 345
Query: 736 PXXS 747
P S
Sbjct: 346 PERS 349
Score = 31.9 bits (69), Expect = 0.70
Identities = 27/96 (28%), Positives = 32/96 (33%), Gaps = 1/96 (1%)
Frame = +2
Query: 464 PXPXNPRPPGXGXGXPXPPXPXXENXXPPXXGXXPXKTLXPXGXQKAXTRKKAGXRX*FP 643
P P PP G P PP PP G P +L P Q + AG P
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP--PQAGGSPPPAGTGSPPP 337
Query: 644 KARXPXKTXXKNEXPL*RXXXPTGX*XPGXPP-GXP 748
R + ++ PTG G PP G P
Sbjct: 338 PPRQKRQAPERSPP---TGSPPTGSPPTGRPPRGGP 370
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.9 bits (84), Expect = 0.011
Identities = 30/94 (31%), Positives = 32/94 (34%)
Frame = +1
Query: 409 IXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXX 588
+ P G G P GP P PPG G PP GG P GG P P+
Sbjct: 706 LPPITGGPPPPPGLPPITGGPPPPPPPG------GLPPITGGPPPPPPPGGLP---PISG 756
Query: 589 XPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPP 690
PP P G P P K P PP
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 36.7 bits (81), Expect = 0.024
Identities = 28/86 (32%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Frame = +1
Query: 436 GGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPP-KGXNP 612
G P GP P PPG G PPP + P GG P P PP G P
Sbjct: 702 GSSALPPITGGP--PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Query: 613 KKGXXPGVIPXGXXPXKNLPXK*XPP 690
PG P P K PP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 32.3 bits (70), Expect = 0.53
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGK-NPLXXX 591
P P GG P GP P PP G PPP GG P PG P+
Sbjct: 742 PPPPPPPGGL--PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
Query: 592 PPKGXNPKK 618
P PKK
Sbjct: 800 IPDYLPPKK 808
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXG 531
P G+ P G P P P P PPG G PPP G
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 30.3 bits (65), Expect = 2.1
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 3/94 (3%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGG---KXVSPXXGGXPGKNPLX 585
P PG G P P P PP G G PPP GG P GG G P
Sbjct: 730 PPPGGLPPITGGPPPPPPPG-GLPPISG-GPPPPPPPPGGCPPPPPPPPPGGFKG-GPPP 786
Query: 586 XXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XP 687
PP P P +P P + P + P
Sbjct: 787 PPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFP 820
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.9 bits (84), Expect = 0.011
Identities = 30/94 (31%), Positives = 32/94 (34%)
Frame = +1
Query: 409 IXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXX 588
+ P G G P GP P PPG G PP GG P GG P P+
Sbjct: 706 LPPITGGPPPPPGLPPITGGPPPPPPPG------GLPPITGGPPPPPPPGGLP---PISG 756
Query: 589 XPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPP 690
PP P G P P K P PP
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 36.7 bits (81), Expect = 0.024
Identities = 28/86 (32%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Frame = +1
Query: 436 GGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPP-KGXNP 612
G P GP P PPG G PPP + P GG P P PP G P
Sbjct: 702 GSSALPPITGGP--PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Query: 613 KKGXXPGVIPXGXXPXKNLPXK*XPP 690
PG P P K PP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 32.3 bits (70), Expect = 0.53
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGK-NPLXXX 591
P P GG P GP P PP G PPP GG P PG P+
Sbjct: 742 PPPPPPPGGL--PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
Query: 592 PPKGXNPKK 618
P PKK
Sbjct: 800 IPDYLPPKK 808
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXG 531
P G+ P G P P P P PPG G PPP G
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 30.3 bits (65), Expect = 2.1
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 3/94 (3%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGG---KXVSPXXGGXPGKNPLX 585
P PG G P P P PP G G PPP GG P GG G P
Sbjct: 730 PPPGGLPPITGGPPPPPPPG-GLPPISG-GPPPPPPPPGGCPPPPPPPPPGGFKG-GPPP 786
Query: 586 XXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XP 687
PP P P +P P + P + P
Sbjct: 787 PPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFP 820
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.9 bits (84), Expect = 0.011
Identities = 30/94 (31%), Positives = 32/94 (34%)
Frame = +1
Query: 409 IXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXX 588
+ P G G P GP P PPG G PP GG P GG P P+
Sbjct: 289 LPPITGGPPPPPGLPPITGGPPPPPPPG------GLPPITGGPPPPPPPGGLP---PISG 339
Query: 589 XPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPP 690
PP P G P P K P PP
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 36.7 bits (81), Expect = 0.024
Identities = 28/86 (32%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Frame = +1
Query: 436 GGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPP-KGXNP 612
G P GP P PPG G PPP + P GG P P PP G P
Sbjct: 285 GSSALPPITGGP--PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 342
Query: 613 KKGXXPGVIPXGXXPXKNLPXK*XPP 690
PG P P K PP
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 32.3 bits (70), Expect = 0.53
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGK-NPLXXX 591
P P GG P GP P PP G PPP GG P PG P+
Sbjct: 325 PPPPPPPGGL--PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 382
Query: 592 PPKGXNPKK 618
P PKK
Sbjct: 383 IPDYLPPKK 391
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXG 531
P G+ P G P P P P PPG G PPP G
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 30.3 bits (65), Expect = 2.1
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 3/94 (3%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGG---KXVSPXXGGXPGKNPLX 585
P PG G P P P PP G G PPP GG P GG G P
Sbjct: 313 PPPGGLPPITGGPPPPPPPG-GLPPISG-GPPPPPPPPGGCPPPPPPPPPGGFKG-GPPP 369
Query: 586 XXPPKGXNPKKGXXPGVIPXGXXPXKNLPXK*XP 687
PP P P +P P + P + P
Sbjct: 370 PPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFP 403
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 35.5 bits (78), Expect = 0.056
Identities = 27/77 (35%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +1
Query: 415 PXPGEXXGGXGX--PFRXPGPX*PXPPGXGXGXTG--XPPPXGGKXVSPXXGGXPGKNPL 582
P P G G P PGP P P G G PP GGK P G PG+N
Sbjct: 143 PGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGK---PGPAGPPGENGR 199
Query: 583 XXXPPKGXNPKKGXXPG 633
P G +P + PG
Sbjct: 200 NGEPQPG-SPGEPGRPG 215
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 35.5 bits (78), Expect = 0.056
Identities = 26/74 (35%), Positives = 29/74 (39%)
Frame = +1
Query: 421 PGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPK 600
P GG G P PG PPG G G PP GG+ P GG G P P
Sbjct: 154 PPPLMGGGGDPRGPPGGM-GGPPGHGG--MGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 210
Query: 601 GXNPKKGXXPGVIP 642
P G G++P
Sbjct: 211 PGGP--GGPGGMLP 222
Score = 28.7 bits (61), Expect = 6.5
Identities = 31/102 (30%), Positives = 34/102 (33%), Gaps = 8/102 (7%)
Frame = +1
Query: 376 GKXXXVXP-AXGIXPXPGEXXGGXGXPFRXPG---PX*PXPPGXGXGXTGXPPPXGG--- 534
G V P A P G GG G P P P P G TG PP GG
Sbjct: 104 GMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGD 163
Query: 535 -KXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXP 657
+ GG PG + P G +G PG G P
Sbjct: 164 PRGPPGGMGGPPGHGGMGGPPGHGG---QGGPPGHGGMGGPP 202
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = -2
Query: 567 GXSPXXGGXXFSXXGXGGXGXPXPXPGGRG-LXGXGXPEG 451
G P GG G GG G P P GG G G G P G
Sbjct: 181 GGPPGHGGQG-GPPGHGGMGGPPPGQGGPGGPGGPGGPGG 219
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.5 bits (78), Expect = 0.056
Identities = 26/74 (35%), Positives = 29/74 (39%)
Frame = +1
Query: 421 PGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPK 600
P GG G P PG PPG G G PP GG+ P GG G P P
Sbjct: 434 PPPLMGGGGDPRGPPGGM-GGPPGHGG--MGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 490
Query: 601 GXNPKKGXXPGVIP 642
P G G++P
Sbjct: 491 PGGP--GGPGGMLP 502
Score = 28.7 bits (61), Expect = 6.5
Identities = 31/102 (30%), Positives = 34/102 (33%), Gaps = 8/102 (7%)
Frame = +1
Query: 376 GKXXXVXP-AXGIXPXPGEXXGGXGXPFRXPG---PX*PXPPGXGXGXTGXPPPXGG--- 534
G V P A P G GG G P P P P G TG PP GG
Sbjct: 384 GMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGD 443
Query: 535 -KXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXP 657
+ GG PG + P G +G PG G P
Sbjct: 444 PRGPPGGMGGPPGHGGMGGPPGHGG---QGGPPGHGGMGGPP 482
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = -2
Query: 567 GXSPXXGGXXFSXXGXGGXGXPXPXPGGRG-LXGXGXPEG 451
G P GG G GG G P P GG G G G P G
Sbjct: 461 GGPPGHGGQG-GPPGHGGMGGPPPGQGGPGGPGGPGGPGG 499
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.1 bits (77), Expect = 0.075
Identities = 26/74 (35%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = +1
Query: 400 AXGIXPXPGEXXGGXGXPFRXPG-PX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXP--G 570
A G PG G P PG P PP G G G PPP G P G P G
Sbjct: 396 AFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVG 455
Query: 571 KNPLXXXPPKGXNP 612
P G NP
Sbjct: 456 APPPGAAGAPGGNP 469
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/76 (28%), Positives = 23/76 (30%)
Frame = +1
Query: 406 GIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLX 585
G P G P G P P G G + PP G P G PG
Sbjct: 388 GAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPG---AY 444
Query: 586 XXPPKGXNPKKGXXPG 633
PP G P PG
Sbjct: 445 GPPPTGFPPVGAPPPG 460
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = +1
Query: 478 PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXP--GVIPXGX 651
P PG G G G PPP GG +P G P P PP P P G P G
Sbjct: 400 PQGPG-GPGGYGPPPP-GGPG-APGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGA 456
Query: 652 XP 657
P
Sbjct: 457 PP 458
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/76 (30%), Positives = 25/76 (32%)
Frame = +1
Query: 406 GIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLX 585
G P G G G P P P G G G PPP SP G P P+
Sbjct: 319 GAPPPQGAPQQGFGAP-----PQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGP-PPPVS 372
Query: 586 XXPPKGXNPKKGXXPG 633
P P + PG
Sbjct: 373 SAPGNFAPPPQSGPPG 388
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 34.3 bits (75), Expect = 0.13
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +1
Query: 415 PXPGEXXGGXGX--PFRXPGPX*PXPPGXGXGXTG--XPPPXGGKXVSPXXGGXPGKNPL 582
P P G G P PGP P P G G PP GGK P G PG+N
Sbjct: 145 PGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGK---PGPAGPPGENGN 201
Query: 583 XXXPPKGXNPKKGXXPG 633
P G P + PG
Sbjct: 202 NGEPQPGA-PGEPGQPG 217
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/80 (27%), Positives = 24/80 (30%)
Frame = +1
Query: 451 PFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXP 630
P PGP P P G G P P G + G PG P G P P
Sbjct: 141 PEGPPGPAGPPGPDGNKGPLGPPGPPGPE----GPNGEPGNKGPAGPPGPGGKPGPAGPP 196
Query: 631 GVIPXGXXPXKNLPXK*XPP 690
G P P + P
Sbjct: 197 GENGNNGEPQPGAPGEPGQP 216
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.23
Identities = 26/86 (30%), Positives = 29/86 (33%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXP 594
P PG G G P R P P G G P P G K P G PG + P
Sbjct: 151 PCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPGPPGPK--GPR--GAPGNSGRAGAP 206
Query: 595 PKGXNPKKGXXPGVIPXGXXPXKNLP 672
+ N G GV G + P
Sbjct: 207 GQPGNDAHGYGGGVGAPGPAGPRGAP 232
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXG--GKXVSPXXGGXPGKNPLXX 588
P P GG G P R P PG G P P G G P G PG N
Sbjct: 193 PGPKGAPGGPGQPGRDGQPGQAGQPGSSSSEPGQPGPNGQPGPRGPPGQAGSPGGNGQPG 252
Query: 589 XPPKGXNPKKGXXPG 633
P + PG
Sbjct: 253 GPGQPGQRGSDGQPG 267
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/82 (30%), Positives = 28/82 (34%), Gaps = 1/82 (1%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPG-KNPLXXX 591
P PG G G P + P P P G G + P P GG PG P
Sbjct: 107 PGPGGSPGKPGKPGKPGAPGAPGNP--GKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP 164
Query: 592 PPKGXNPKKGXXPGVIPXGXXP 657
P G + G G P G P
Sbjct: 165 GPPGPDGNPGSPAG--PSGPGP 184
Score = 31.5 bits (68), Expect = 0.92
Identities = 28/87 (32%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Frame = +1
Query: 400 AXGIXPXPGEXX----GGXGXPFRXPGPX*PXPPGXGXGX--TGXPPPXGGKXVSPXXGG 561
A G PGE GG G P GP P P G TG P P G K P G
Sbjct: 199 APGAPGGPGEPGASEQGGPGEP-GPAGPPGPAGPAGNDGAPGTGGPGPAGPKG-PPGAAG 256
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIP 642
PG + P P G+ P
Sbjct: 257 APGADGNPGGPGTAGKPGGEGEKGICP 283
Score = 29.1 bits (62), Expect = 4.9
Identities = 30/105 (28%), Positives = 31/105 (29%), Gaps = 4/105 (3%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXG--XGXTGXP-PPXGGKXVSPXXGGXPGKNPLX 585
P P G G P GP PPG G G P P G G PG+ P
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGE-PGP 222
Query: 586 XXPPKGXNPK-KGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PP P PG G K P P P P
Sbjct: 223 AGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPGADGNPGGP 267
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/82 (30%), Positives = 28/82 (34%), Gaps = 1/82 (1%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPG-KNPLXXX 591
P PG G G P + P P P G G + P P GG PG P
Sbjct: 107 PGPGGSPGKPGKPGKPGAPGAPGNP--GKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP 164
Query: 592 PPKGXNPKKGXXPGVIPXGXXP 657
P G + G G P G P
Sbjct: 165 GPPGPDGNPGSPAG--PSGPGP 184
Score = 31.5 bits (68), Expect = 0.92
Identities = 28/87 (32%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Frame = +1
Query: 400 AXGIXPXPGEXX----GGXGXPFRXPGPX*PXPPGXGXGX--TGXPPPXGGKXVSPXXGG 561
A G PGE GG G P GP P P G TG P P G K P G
Sbjct: 199 APGAPGGPGEPGASEQGGPGEP-GPAGPPGPAGPAGNDGAPGTGGPGPAGPKG-PPGAAG 256
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIP 642
PG + P P G+ P
Sbjct: 257 APGADGNPGGPGTAGKPGGEGEKGICP 283
Score = 29.1 bits (62), Expect = 4.9
Identities = 30/105 (28%), Positives = 31/105 (29%), Gaps = 4/105 (3%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXG--XGXTGXP-PPXGGKXVSPXXGGXPGKNPLX 585
P P G G P GP PPG G G P P G G PG+ P
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGE-PGP 222
Query: 586 XXPPKGXNPK-KGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PP P PG G K P P P P
Sbjct: 223 AGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPGADGNPGGP 267
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/82 (30%), Positives = 28/82 (34%), Gaps = 1/82 (1%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPG-KNPLXXX 591
P PG G G P + P P P G G + P P GG PG P
Sbjct: 107 PGPGGSPGKPGKPGKPGAPGAPGNP--GKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP 164
Query: 592 PPKGXNPKKGXXPGVIPXGXXP 657
P G + G G P G P
Sbjct: 165 GPPGPDGNPGSPAG--PSGPGP 184
Score = 31.5 bits (68), Expect = 0.92
Identities = 28/87 (32%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Frame = +1
Query: 400 AXGIXPXPGEXX----GGXGXPFRXPGPX*PXPPGXGXGX--TGXPPPXGGKXVSPXXGG 561
A G PGE GG G P GP P P G TG P P G K P G
Sbjct: 199 APGAPGGPGEPGASEQGGPGEP-GPAGPPGPAGPAGNDGAPGTGGPGPAGPKG-PPGAAG 256
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIP 642
PG + P P G+ P
Sbjct: 257 APGADGNPGGPGTAGKPGGEGEKGICP 283
Score = 29.1 bits (62), Expect = 4.9
Identities = 30/105 (28%), Positives = 31/105 (29%), Gaps = 4/105 (3%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXG--XGXTGXP-PPXGGKXVSPXXGGXPGKNPLX 585
P P G G P GP PPG G G P P G G PG+ P
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGE-PGP 222
Query: 586 XXPPKGXNPK-KGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PP P PG G K P P P P
Sbjct: 223 AGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPGADGNPGGP 267
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/82 (30%), Positives = 28/82 (34%), Gaps = 1/82 (1%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPG-KNPLXXX 591
P PG G G P + P P P G G + P P GG PG P
Sbjct: 107 PGPGGSPGKPGKPGKPGAPGAPGNP--GKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPP 164
Query: 592 PPKGXNPKKGXXPGVIPXGXXP 657
P G + G G P G P
Sbjct: 165 GPPGPDGNPGSPAG--PSGPGP 184
Score = 31.5 bits (68), Expect = 0.92
Identities = 28/87 (32%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Frame = +1
Query: 400 AXGIXPXPGEXX----GGXGXPFRXPGPX*PXPPGXGXGX--TGXPPPXGGKXVSPXXGG 561
A G PGE GG G P GP P P G TG P P G K P G
Sbjct: 199 APGAPGGPGEPGASEQGGPGEP-GPAGPPGPAGPAGNDGAPGTGGPGPAGPKG-PPGAAG 256
Query: 562 XPGKNPLXXXPPKGXNPKKGXXPGVIP 642
PG + P P G+ P
Sbjct: 257 APGADGNPGGPGTAGKPGGEGEKGICP 283
Score = 29.1 bits (62), Expect = 4.9
Identities = 30/105 (28%), Positives = 31/105 (29%), Gaps = 4/105 (3%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXG--XGXTGXP-PPXGGKXVSPXXGGXPGKNPLX 585
P P G G P GP PPG G G P P G G PG+ P
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGE-PGP 222
Query: 586 XXPPKGXNPK-KGXXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
PP P PG G K P P P P
Sbjct: 223 AGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPGADGNPGGP 267
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 32.7 bits (71), Expect = 0.40
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +1
Query: 469 PX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXPG 633
P P P G G G P P G +P GG P P G NP PG
Sbjct: 176 PPGPAGPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAG-NPGTDGAPG 229
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 32.3 bits (70), Expect = 0.53
Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = +1
Query: 421 PGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXG--GKXVSPXXGGXPGKNPLXXXP 594
PGE PGP P PPG G G P P G G +P G G+ P
Sbjct: 191 PGEPGSPAKSEPAVPGP--PGPPGQA-GQQGPPGPPGSNGIDGAPGAPGAKGEPGTPGEP 247
Query: 595 PKGXNPKKGXXPG 633
K P K PG
Sbjct: 248 GKDGEPGKPGTPG 260
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 31.9 bits (69), Expect = 0.70
Identities = 22/57 (38%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PX--PPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNP 579
P P G G P GP P P G G G P P GG GG PG NP
Sbjct: 171 PGPAGPAGNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGG-PG-NP 225
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +1
Query: 436 GGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXP 594
GG P+ PG P PPG PPP G G GK P P
Sbjct: 805 GGPRPPYPYPGG--PVPPGPPQNRMPPPPPAQGAPSPSGAAGSNGKQPRYGTP 855
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 470 PXNPRPPGXGXGXPXPPXPXXENXXPP 550
P PRPP G P PP P PP
Sbjct: 804 PGGPRPPYPYPGGPVPPGPPQNRMPPP 830
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 0.92
Identities = 21/55 (38%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Frame = +1
Query: 478 PXPPGXGXGXTGXPPPX-GGKXVS---PXXGGXPGKNPLXXXPPKGXNPKKGXXP 630
P P G G G PPP GG P GG P P PP G P G P
Sbjct: 1560 PPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPP---PRLGMPPPGPPPPNGGPP 1611
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/75 (29%), Positives = 29/75 (38%)
Frame = +1
Query: 484 PPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXK 663
P G G PPP GG ++ GG P PP+G + +G P + G P
Sbjct: 1549 PQNRGPPMGGLPPPHGG--MNGWRGGPP--------PPRGGSHCQGPPP--LMGGPPPRL 1596
Query: 664 NLPXK*XPPXKXVXP 708
+P PP P
Sbjct: 1597 GMPPPGPPPPNGGPP 1611
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Frame = +1
Query: 463 PGPX*PXPPGXGXGXTGXPPPXG--GKXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXPGV 636
PGP P P G G P P G G+ P G PG P P G G P
Sbjct: 190 PGPPGPAGPAGNDGAAGTPGPDGPAGESTYPEPAG-PG--PAGPPGPAGPPGPDGASPTA 246
Query: 637 IPXGXXP 657
P P
Sbjct: 247 APGAAGP 253
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +1
Query: 463 PGPX*PXPPGXGXGXTGXPPPXGGK-XVSPXXGGXPGKNPLXXXPPKGXNPKKGXXPG 633
P P P P G G G P P G +P G PG P NP PG
Sbjct: 220 PEPAGPGPAGP-PGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPPG 276
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Frame = +1
Query: 421 PGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKN-PLXXXPP 597
PG+ G PGP P PPG G G P GG P G PG + PP
Sbjct: 263 PGQDGSGGAAQPGPPGP--PGPPG-NDGQPGGPGQPGG----PGQDGGPGTDAAYCPCPP 315
Query: 598 KGXNPKKGXXPGVIPXG 648
+ P G G P G
Sbjct: 316 R--TPAGGGGGGDFPAG 330
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 436 GGXGXPFRXPGPX*PXPPG-XGXGXTGXPPPXGGKXVSPXXGGXPG 570
GG G P PGP P PPG G G P P G P G PG
Sbjct: 249 GGPG-PAGPPGP--PGPPGQDGSGGAAQPGPPGPPG-PPGNDGQPG 290
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/92 (29%), Positives = 31/92 (33%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXP 594
P P G G P + G P PPG G G P G +P G G+
Sbjct: 150 PGPKGPNGNPGAPAQGGGQGPPGPPGPA-GSAGSPGQAGAPG-NPGSPGKSGQRGRGLPG 207
Query: 595 PKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPP 690
P G +G PG G N P PP
Sbjct: 208 PSGAPGSQG-PPGA--PGQPGSGNAPGPAGPP 236
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/80 (32%), Positives = 28/80 (35%), Gaps = 7/80 (8%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPG-XGXGXTGXPPPXG--GKXVSPXXGGXPGK---- 573
P P G G P + P P PG G G P P G G P G PG
Sbjct: 171 PGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGSQGPPGAPGQPGSGNAP 230
Query: 574 NPLXXXPPKGXNPKKGXXPG 633
P P G N + G PG
Sbjct: 231 GPAGPPGPAGPNGQPG-HPG 249
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/60 (36%), Positives = 23/60 (38%)
Frame = +1
Query: 400 AXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNP 579
A GI P P GG P G P PP G G PP V+P GKNP
Sbjct: 91 AGGIPPPP-PMMGGIPPPPPMFGAPPPPPPPSGLG-VAPQPPRPKTPVNPALAKLGGKNP 148
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +1
Query: 406 GIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSP 549
GI P P GG P G P PP G PPP G V+P
Sbjct: 82 GIPPPPPMFAGGIPPPPPMMGGIPPPPP--MFGAPPPPPPPSGLGVAP 127
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/76 (31%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXP----PPXGGKXVSPXXGGX 564
P G+ P P P P P P PPG G G P PP + P GG
Sbjct: 279 PTPGMTPRPPPPPSSGMWP---PPP--PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 333
Query: 565 PGKNPLXXXPPKGXNP 612
P P P G P
Sbjct: 334 PPPPPPGMRYPGGMPP 349
Score = 30.3 bits (65), Expect = 2.1
Identities = 29/108 (26%), Positives = 32/108 (29%), Gaps = 1/108 (0%)
Frame = +1
Query: 469 PX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXPGVIPXG 648
P P PP G PPP G +P G PG P P + P G P P G
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGR---TPGPPGMPGMPP-PPPPSRFGPPGMGGMPPPPPPG 340
Query: 649 XXPXKNLPXK*XPPXKXVXP-XXPXKXRXTPXXSLXGXGXXXNXXXPS 789
+P P P P P G G PS
Sbjct: 341 MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPPS 388
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 464 PXPXNPRPPGXGXGXPXPPXPXXENXXPPXXGXXPXKTLXPXG 592
P P P PP G P PP P PP P +T P G
Sbjct: 272 PMPP-PMPPTPGM-TPRPPPPPSSGMWPPPPPPPPGRTPGPPG 312
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/76 (31%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXP----PPXGGKXVSPXXGGX 564
P G+ P P P P P P PPG G G P PP + P GG
Sbjct: 289 PTPGMTPRPPPPPSSGMWP---PPP--PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 343
Query: 565 PGKNPLXXXPPKGXNP 612
P P P G P
Sbjct: 344 PPPPPPGMRYPGGMPP 359
Score = 30.3 bits (65), Expect = 2.1
Identities = 29/108 (26%), Positives = 32/108 (29%), Gaps = 1/108 (0%)
Frame = +1
Query: 469 PX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXPGVIPXG 648
P P PP G PPP G +P G PG P P + P G P P G
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGR---TPGPPGMPGMPP-PPPPSRFGPPGMGGMPPPPPPG 350
Query: 649 XXPXKNLPXK*XPPXKXVXP-XXPXKXRXTPXXSLXGXGXXXNXXXPS 789
+P P P P P G G PS
Sbjct: 351 MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPPS 398
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 464 PXPXNPRPPGXGXGXPXPPXPXXENXXPPXXGXXPXKTLXPXG 592
P P P PP G P PP P PP P +T P G
Sbjct: 282 PMPP-PMPPTPGM-TPRPPPPPSSGMWPPPPPPPPGRTPGPPG 322
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKN 576
P P G G P + G P PPG G G P G+ +P G PGK+
Sbjct: 150 PGPKGPNGNPGAPAQGGGQGPPGPPGPA-GSAGSP----GQAGAPGNPGSPGKS 198
Score = 29.9 bits (64), Expect = 2.8
Identities = 26/80 (32%), Positives = 28/80 (35%), Gaps = 7/80 (8%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPG-XGXGXTGXPPPXG--GKXVSPXXGGXPGK---- 573
P P G G P + P P PG G G P P G G P G PG
Sbjct: 171 PGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGPQGPPGAPGQPGSGNAP 230
Query: 574 NPLXXXPPKGXNPKKGXXPG 633
P P G N + G PG
Sbjct: 231 GPAGPPGPAGPNGQPG-HPG 249
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/88 (26%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Frame = +1
Query: 451 PFRXPGPX*PXPPGXGXGXTGXP--PPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGX 624
P PGP P P G G P P G+ +P G G+N P P +
Sbjct: 149 PQGPPGPPGPPGPSGDAGSNGNPGSPGQDGQPGAPGNKGPSGQNGNPGAPGAPGQPGQDA 208
Query: 625 XPGVIPXGXXPXKNLPXK*XPPXKXVXP 708
I G + P PP + P
Sbjct: 209 PSEPITPGAPGPQGAPGPQGPPGQPGQP 236
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +1
Query: 424 GEXXGGXGXPFRXPGPX*PX-PPGX--GXGXTGXPPPXG--GKXVSPXXGGXPGK 573
GE G P PGP P PPG G G G P P G G+ +P G G+
Sbjct: 210 GEKGKGEPGPAGPPGPPGPGGPPGDAGGAGSDGAPGPQGPPGQDGTPGNAGPDGQ 264
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = -2
Query: 558 PXXGGXXFSXXGXGGXGXPXPX--PGGRGLXGXGXPEGXP 445
P GG G G G P P PG G G P+G P
Sbjct: 226 PGPGGPPGDAGGAGSDGAPGPQGPPGQDGTPGNAGPDGQP 265
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/79 (29%), Positives = 27/79 (34%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKN 576
P P P G G ++ P P P G G TG G +P G GKN
Sbjct: 191 PGAAGRPGPAGPRGEPGTEYKPGQPGRPGPQGP-RGETGP----AGNPGAPGNDGEAGKN 245
Query: 577 PLXXXPPKGXNPKKGXXPG 633
P +P K PG
Sbjct: 246 GNAGRPGPPGHPGKNGVPG 264
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/80 (32%), Positives = 27/80 (33%), Gaps = 2/80 (2%)
Frame = +1
Query: 400 AXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXG--GKXVSPXXGGXPGK 573
A G PGE G P P P PPG G G P P G G P GG G+
Sbjct: 215 ADGQPGMPGEP-GKDAPQEGSPVPGDPGPPGDS-GIPGPPGPPGMAGPDGIPGMGGAKGQ 272
Query: 574 NPLXXXPPKGXNPKKGXXPG 633
N P PG
Sbjct: 273 NGPDGPPGASGESGPNGPPG 292
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/79 (29%), Positives = 27/79 (34%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKN 576
P P P G G ++ P P P G G TG G +P G GKN
Sbjct: 185 PGAAGRPGPAGPRGEPGTEYKPGQPGRPGPQGP-RGETGP----AGNPGAPGNDGEAGKN 239
Query: 577 PLXXXPPKGXNPKKGXXPG 633
P +P K PG
Sbjct: 240 GNAGRPGPPGHPGKNGVPG 258
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXP--PPXGGKXVSPXXGGXPG 570
P P P GG G P + G P P G G G P P G+ +P G PG
Sbjct: 201 PGPAGAPGPQGPAGGPGQPGQSGGAGAPGPAG-APGAPGGPGQPGQDGQPGAPGNDGAPG 259
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 11/63 (17%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRX-----------PGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGG 561
P P GG G P R PGP P G G P GG V+P G
Sbjct: 146 PGPDGENGGAGEPGRDGLAGRPGARGSPGPRGPSGNPGADGPAGQLGPQGGSNVAPSPAG 205
Query: 562 XPG 570
PG
Sbjct: 206 EPG 208
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 11/63 (17%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRX-----------PGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGG 561
P P GG G P R PGP P G G P GG V+P G
Sbjct: 199 PGPDGENGGAGEPGRDGLAGRPGARGSPGPRGPSGNPGADGPAGQLGPQGGSNVAPSPAG 258
Query: 562 XPG 570
PG
Sbjct: 259 EPG 261
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.9 bits (64), Expect = 2.8
Identities = 29/103 (28%), Positives = 32/103 (31%), Gaps = 2/103 (1%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXP 594
P P G G P G P PPG G G P G +P G G+
Sbjct: 148 PGPQGPNGNPGAPAHGGGQGPPGPPGPA-GDAGSPGQAGAPG-NPGRPGQSGQRSRGLPG 205
Query: 595 PKGXNPKKG--XXPGVIPXGXXPXKNLPXK*XPPXKXVXPXXP 717
P G +G PG G P P PP P P
Sbjct: 206 PSGRPGPQGPPGAPGQPGSGSTPGPAGPP--GPPGPNGQPGHP 246
Score = 29.1 bits (62), Expect = 4.9
Identities = 26/80 (32%), Positives = 28/80 (35%), Gaps = 7/80 (8%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPG-XGXGXTGXPPPXG--GKXVSPXXGGXPGK---- 573
P P G G P + P P PG G G P P G G P G PG
Sbjct: 169 PGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSGRPGPQGPPGAPGQPGSGSTP 228
Query: 574 NPLXXXPPKGXNPKKGXXPG 633
P P G N + G PG
Sbjct: 229 GPAGPPGPPGPNGQPG-HPG 247
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/74 (31%), Positives = 26/74 (35%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXP 594
P P G G ++ P P PPG G G G+ SP G GK P
Sbjct: 198 PGPAGPRGEPGTEYKPGQPGRPGPPGP-RGEAG----PAGQPGSPGNDGESGKPGNAGRP 252
Query: 595 PKGXNPKKGXXPGV 636
P K PGV
Sbjct: 253 GPPGAPGKNGTPGV 266
Score = 29.5 bits (63), Expect = 3.7
Identities = 24/69 (34%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Frame = +1
Query: 439 GXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGK--NPLXXXP--PKGX 606
G P PG P P G G P P GG P GG G+ NP P P+G
Sbjct: 148 GRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPG-GPGEGGDGGRPGNPGRPGPAGPRG- 205
Query: 607 NPKKGXXPG 633
P PG
Sbjct: 206 EPGTEYKPG 214
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/88 (26%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Frame = +1
Query: 451 PFRXPGPX*PXPPGXGXGXTGXP--PPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGX 624
P PGP P P G G P P G+ +P G G N P P +
Sbjct: 116 PQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDA 175
Query: 625 XPGVIPXGXXPXKNLPXK*XPPXKXVXP 708
I G + P PP + P
Sbjct: 176 PSEPITPGAPGPQGTPGPQGPPGQPGQP 203
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/88 (26%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Frame = +1
Query: 451 PFRXPGPX*PXPPGXGXGXTGXP--PPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGX 624
P PGP P P G G P P G+ +P G G N P P +
Sbjct: 149 PQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDA 208
Query: 625 XPGVIPXGXXPXKNLPXK*XPPXKXVXP 708
I G + P PP + P
Sbjct: 209 PSEPITPGAPGPQGTPGPQGPPGQPGQP 236
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +1
Query: 463 PGPX*PXPPGXGXGXTGXPPPXGGK-XVSPXXGGXPGKNPLXXXPPKGXNPKKGXXPG 633
P P P P G G G P P G +P G PG P NP PG
Sbjct: 219 PEPAAPGPAGP-PGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPPG 275
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
Frame = +1
Query: 463 PGPX*PXPPGXGXGXTGXPPPXG--GKXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXPGV 636
PGP P P G G P P G G+ P PG P P G G P
Sbjct: 189 PGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAA-PG--PAGPPGPAGPPGPDGASPTA 245
Query: 637 IPXGXXP 657
P P
Sbjct: 246 APGAAGP 252
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/70 (32%), Positives = 24/70 (34%)
Frame = +1
Query: 421 PGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPK 600
PGE G P PGP P PG G G P P G G P P
Sbjct: 215 PGEP--GDSGPPGPPGP--PGAPG-NDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPA 269
Query: 601 GXNPKKGXXP 630
G +KG P
Sbjct: 270 GTPGEKGICP 279
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.7
Identities = 24/75 (32%), Positives = 27/75 (36%), Gaps = 8/75 (10%)
Frame = +1
Query: 436 GGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXG--GKXVS------PXXGGXPGKNPLXXX 591
G G P PGP P P G G P G GK ++ P G PG
Sbjct: 183 GQDGVP-GLPGPPGPSGPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPPGPPGPQGPPGP 241
Query: 592 PPKGXNPKKGXXPGV 636
P K P K PG+
Sbjct: 242 PGKDGQPGKAGPPGL 256
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXP 594
P P G G P P P PPG PPP P G PG P
Sbjct: 113 PGPPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPP--GPPG--PAGPPG 168
Query: 595 PKGXNPKKG 621
PKG +G
Sbjct: 169 PKGLPGPQG 177
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/70 (32%), Positives = 24/70 (34%)
Frame = +1
Query: 421 PGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPK 600
PGE G P PGP P PG G G P P G G P P
Sbjct: 215 PGEP--GDSGPPGPPGP--PGAPG-NDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPA 269
Query: 601 GXNPKKGXXP 630
G +KG P
Sbjct: 270 GTPGEKGICP 279
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 511 GXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXN-PKKGXXPGVIP 642
G PPP GG P G G P P N P G P +P
Sbjct: 11 GGPPPGGGAQPFPGASGSGGMMPNGAHPHMSLNSPSMGVPPADMP 55
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = +1
Query: 484 PPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXPGVIPXGXXPXK 663
P G G G + PPP GG PG P N G PG P P
Sbjct: 157 PTGGGGGGSVPPPPPAATAAVSMNGGGPGSAP-GSAHSVNNNVNPG-TPGSNPLS-NPMS 213
Query: 664 NLPXK*XPP 690
N P PP
Sbjct: 214 NPPLSSGPP 222
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +1
Query: 478 PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXP 630
P PP G G PPP G P GG P P PP P G P
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPP--GGYP---PQQQRPPYQAQPYPGPPP 725
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +1
Query: 478 PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXP 630
P PP G G PPP G P GG P P PP P G P
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPP--GGYP---PQQQRPPYQAQPYPGPPP 725
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNP 579
P PG+ G P PG PPG PP GG G PG P
Sbjct: 397 PSPGQYPG----PMHYPGMPPMMPPGAPFSAGASYPPMGGPFPPNPYGMHPGMTP 447
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 29.5 bits (63), Expect = 3.7
Identities = 26/88 (29%), Positives = 28/88 (31%), Gaps = 9/88 (10%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRX-----PGPX*PXPPGXGXGXTGXP----PPXGGKXVSP 549
P G P P G G P R PGP P P G G P PP + P
Sbjct: 145 PGLGGPPGPPGQDGIPGNPGRNGEDGAPGPQGPSGPPGPPGQPGQPGQRGPPGEPGALLP 204
Query: 550 XXGGXPGKNPLXXXPPKGXNPKKGXXPG 633
PG + P P K PG
Sbjct: 205 GGDAPPGPSGPPGRPGAPGQPGKAGSPG 232
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Frame = +1
Query: 421 PGEXXGGXGXPFRX--PGPX*PXPPGXGXGXTGXPPPXGG--KXVSPXXGGXPGK 573
PG+ GG G P P P P G +G P P G + P GG GK
Sbjct: 32 PGKTSGGGGDPPAGGQPTPGDAGNPNSQAGDSGKPNPPAGDPTKLKPGGGGPAGK 86
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Frame = +1
Query: 421 PGEXXG-GXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPP 597
PGE G G G PGP P G G P G +P G PG+ P
Sbjct: 162 PGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPGQPGEPGSPG 221
Query: 598 KGXNPKKGXXPG 633
+ + PG
Sbjct: 222 EPGPDGRAGHPG 233
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Frame = +1
Query: 421 PGEXXG-GXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPP 597
PGE G G G PGP P G G P G +P G PG+ P
Sbjct: 162 PGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPGQPGEPGSPG 221
Query: 598 KGXNPKKGXXPG 633
+ + PG
Sbjct: 222 EPGPDGRAGHPG 233
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 29.1 bits (62), Expect = 4.9
Identities = 26/85 (30%), Positives = 29/85 (34%), Gaps = 1/85 (1%)
Frame = +1
Query: 439 GXGXPFRXPG-PX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPK 615
G P PG P P PG G G G P G P + P P G N +
Sbjct: 144 GPPGPSGHPGKPGRPGRPG-GHGMPGMPG-LGASPCQPRTQSQCQQCPQGPPGPPGLNGQ 201
Query: 616 KGXXPGVIPXGXXPXKNLPXK*XPP 690
G G+ P G LP PP
Sbjct: 202 PGLPGGMGPPGQSMSNVLPGPLGPP 226
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +2
Query: 464 PXPXNPRPPGXGXGXPXPPXPXXENXXPPXXGXXPXK-TLXPXGXQKAXTRKKAGXRX*F 640
P P PR G P PP P PP P + + P Q+ R
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPS----- 177
Query: 641 PKARXPXKT 667
P+ R P +T
Sbjct: 178 PEPRNPPRT 186
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGK 573
P P G G P + P P PG G + P G+ P G PG+
Sbjct: 169 PGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPPGPAGGPGQ 221
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/58 (34%), Positives = 21/58 (36%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPG 570
P P P GG G P G P P G G +G P G V P G PG
Sbjct: 204 PGPSGRPGPPGPAGGPGQPGHSGGAGSPGPQGP-PGPSGQPGHSGNDGV-PGAPGNPG 259
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXG--GKXVSPXXGGXPG 570
P P P GG G P + G P PG G G P G G +P G PG
Sbjct: 211 PGPSGRPGPQGPAGGPGQPGQSGGSGTPGQPG-APGAPGHPGQAGTPGTPGAPGNSGAPG 269
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +1
Query: 409 IXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPG 570
+ P G GG G P P PP G G PPP +P G G
Sbjct: 18 LFPSAGGGGGGCGCGAPPPPPACAPPPAPACGG-GAPPPPAYAAPAPSYGAPAG 70
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/73 (30%), Positives = 25/73 (34%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXP 594
P PG G G P P P G G G P P G ++ G PG
Sbjct: 233 PGPGGPPGQDGHPGDAGAPGAPGQVVAGPGSVGPPGPQGPPGLA-GPDGQPGHGGGGQPG 291
Query: 595 PKGXNPKKGXXPG 633
P+G P PG
Sbjct: 292 PQGP-PGDDGHPG 303
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXG--GKXVSPXXGGXPG 570
P P P GG G P + G P P G G G P G G +P G PG
Sbjct: 201 PGPSGAPGPQGPAGGPGQPGQSGGAGAPGPAG-APGAPGGPGNAGTPGTPGAPGNAGAPG 259
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Frame = +1
Query: 415 PXPGEXXGGXGXPFRXPGPX*PXPPGX-GXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXX 591
P P G G P R P PG G G P G SP G PG+N
Sbjct: 176 PGPQGPAGDNGQPGRPGNDGRPGAPGAPGTRSVGRPGTAG----SPGPQGPPGQNGNDGQ 231
Query: 592 PPKGXNPKKGXXPG 633
P P + PG
Sbjct: 232 PGNDGAPGQPGQPG 245
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +1
Query: 421 PGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKN 576
P G G P GP P PPG G +G P G +P G PG++
Sbjct: 232 PQGPPGPSGAPGAPGGPGYPGPPGQ-KGPSGAPGQPGSDG-NPGAPGQPGQS 281
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +1
Query: 439 GXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKG 603
G G + PGP P P G G P P G P GG N P G
Sbjct: 192 GEGAGYAEPGPAGPAGPPGPDGQPGAPGPDG----QPGAGGTTSTNQPGPPGPAG 242
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 28.7 bits (61), Expect = 6.5
Identities = 29/104 (27%), Positives = 37/104 (35%), Gaps = 3/104 (2%)
Frame = +1
Query: 406 GIXPXPGEXXGGXGXPFR--XPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNP 579
G+ PG P P P P P G G G P P G + GG PG++
Sbjct: 119 GVAGLPGNPGRPPQAPCDPITPPPCKPCPQGP-PGVQGPPGPAGDAGLDGQPGG-PGQDG 176
Query: 580 LXXXP-PKGXNPKKGXXPGVIPXGXXPXKNLPXK*XPPXKXVXP 708
P PKG P PG P ++ P + P + P
Sbjct: 177 QPGQPGPKGP-PGVNGQPGAPGQDGNPGQDAPSEPLVPGEPGAP 219
>Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical
protein M199.5 protein.
Length = 660
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +1
Query: 463 PGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPG 570
PGP P PPG G G G P GK +P G G
Sbjct: 63 PGP--PGPPGTGTGKDGV-PGTNGKDGTPGDKGDTG 95
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = +1
Query: 451 PFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPKKGXXP 630
P P P PG TG P P V GG P PL KG P
Sbjct: 514 PMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVP 573
Query: 631 GVIPXGXXP 657
G P P
Sbjct: 574 GGPPPPPPP 582
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/70 (32%), Positives = 24/70 (34%)
Frame = +1
Query: 421 PGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPK 600
PGE G P PGP P PG G G P P G G P P
Sbjct: 220 PGEP--GDSGPPGPPGP--PGAPG-NDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPPGPA 274
Query: 601 GXNPKKGXXP 630
G +KG P
Sbjct: 275 GTPGEKGICP 284
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = +1
Query: 436 GGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPK 615
G G P R P PG G G P G K SP G G+ PL P+G +
Sbjct: 214 GARGQPGRPGRDGNPGMPGD-CGPPGAPGSDG-KPGSPGGKGDDGERPLGRPGPRGPPGE 271
Query: 616 KG 621
G
Sbjct: 272 AG 273
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 28.3 bits (60), Expect = 8.6
Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +1
Query: 391 VXPAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXG--GKXVSPXXGGX 564
V PA G PG G G P GP G G G +G P P G G+ +P G
Sbjct: 267 VGPA-GRAGAPGRP-GPPGQP-GPAGPPGENGKGGGQGPSGLPGPPGQPGQNGAPGEVGQ 323
Query: 565 PGKN 576
PG N
Sbjct: 324 PGDN 327
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = +1
Query: 436 GGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPGKNPLXXXPPKGXNPK 615
G G P R P PG G G P G K SP G G+ PL P+G +
Sbjct: 214 GARGQPGRPGRDGNPGMPGD-CGPPGAPGSDG-KPGSPGGKGDDGERPLGRPGPRGPPGE 271
Query: 616 KG 621
G
Sbjct: 272 AG 273
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 28.3 bits (60), Expect = 8.6
Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +1
Query: 391 VXPAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXG--GKXVSPXXGGX 564
V PA G PG G G P GP G G G +G P P G G+ +P G
Sbjct: 248 VGPA-GRAGAPGRP-GPPGQP-GPAGPPGENGKGGGQGPSGLPGPPGQPGQNGAPGEVGQ 304
Query: 565 PGKN 576
PG N
Sbjct: 305 PGDN 308
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/58 (34%), Positives = 21/58 (36%)
Frame = +1
Query: 397 PAXGIXPXPGEXXGGXGXPFRXPGPX*PXPPGXGXGXTGXPPPXGGKXVSPXXGGXPG 570
P P P G G P R G P P G G +G P G V P G PG
Sbjct: 204 PGASGRPGPQGPAGAPGQPGRSGGAGTPGPQGP-PGPSGQPGHSGNDGV-PGTPGNPG 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,904,032
Number of Sequences: 27780
Number of extensions: 206300
Number of successful extensions: 1406
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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