Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_G13
(996 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 37 0.019
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 37 0.019
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 37 0.019
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.079
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 35 0.079
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.079
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 34 0.18
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.42
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 33 0.42
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 32 0.55
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.55
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.55
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.55
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.73
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 31 0.97
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 0.97
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 0.97
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.3
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 31 1.3
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 31 1.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.2
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 30 3.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 3.0
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 3.0
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 3.0
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 30 3.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.9
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 29 5.2
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 29 5.2
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 29 5.2
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 29 5.2
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 29 5.2
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 29 5.2
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 29 5.2
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 6.8
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 29 6.8
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 37.1 bits (82), Expect = 0.019
Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +2
Query: 632 PXXXXSPXPLPRNXPRXPX-PKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPK 808
P P PL N P+ P P P N PP PP P A P P PP
Sbjct: 198 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPPA 257
Query: 809 XLMGPGSHP 835
LM P
Sbjct: 258 QLMASSGTP 266
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 37.1 bits (82), Expect = 0.019
Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +2
Query: 632 PXXXXSPXPLPRNXPRXPX-PKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPK 808
P P PL N P+ P P P N PP PP P A P P PP
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPPA 243
Query: 809 XLMGPGSHP 835
LM P
Sbjct: 244 QLMASSGTP 252
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 37.1 bits (82), Expect = 0.019
Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +2
Query: 632 PXXXXSPXPLPRNXPRXPX-PKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPK 808
P P PL N P+ P P P N PP PP P A P P PP
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPPA 243
Query: 809 XLMGPGSHP 835
LM P
Sbjct: 244 QLMASSGTP 252
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.079
Identities = 25/91 (27%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Frame = +2
Query: 623 PNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XW--ACPXXPXS 796
P PP P P+P P P P + + PP PP P R P P
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPS-----SGMWPPPPPPPPGRTPGPPGMPGMPPP 319
Query: 797 LPPKXLMGPGSHPLVXRXPPXXNXESRAXPP 889
PP PG + PP PP
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Score = 33.5 bits (73), Expect = 0.24
Identities = 29/120 (24%), Positives = 34/120 (28%)
Frame = +2
Query: 629 PPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPK 808
PP P P P P P + P + PP PP P P P PP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 809 XLMGPGSHPLVXRXPPXXNXESRAXPPXXXLPXELPXRRLSKKRAXXPAXXPLXPXXXPP 988
P PP PP P +P + + P P P PP
Sbjct: 321 --------PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
Score = 32.7 bits (71), Expect = 0.42
Identities = 23/72 (31%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Frame = +2
Query: 623 PNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLP 802
P PP P P P P P P P PP PP R P P P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP-GMGGMPPPPPPGMRYPGGMPPPP---P 352
Query: 803 PK-XLMGPGSHP 835
P+ GPG +P
Sbjct: 353 PRYPSAGPGMYP 364
Score = 29.9 bits (64), Expect = 3.0
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 6/85 (7%)
Frame = +2
Query: 620 TPNPPXXXXSPXPLP--RNXPRX----PXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACP 781
TP PP P P P R P P P P P PP P P P
Sbjct: 307 TPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP--GGMPPPPPPRYPSAGPGMYP 364
Query: 782 XXPXSLPPKXLMGPGSHPLVXRXPP 856
P S PP P H ++ PP
Sbjct: 365 PPPPSRPPAP---PSGHGMIPPPPP 386
Score = 28.7 bits (61), Expect = 6.8
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = +1
Query: 607 GXTXNPQPPXXXXK-PXPPPPKXAXAAXPKGSPRXXXTX*XFXPXPHXXXPXSLXMGLPX 783
G T P PP P PPPP P G P P P P + G+P
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP-----PPPPSRFGPPGMG-GMPP 335
Query: 784 XPXITXPQXXHGPRXPP 834
P P PP
Sbjct: 336 PPPPGMRYPGGMPPPPP 352
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 35.1 bits (77), Expect = 0.079
Identities = 28/93 (30%), Positives = 32/93 (34%), Gaps = 2/93 (2%)
Frame = +2
Query: 605 GGARXTPNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPP-TPPXPXR*XWACP 781
G +P PP + P P P+VP P RPP TPP P R P
Sbjct: 116 GDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTP 175
Query: 782 XXPXSL-PPKXLMGPGSHPLVXRXPPXXNXESR 877
P PP+ P P PP N R
Sbjct: 176 PSPEPRNPPRTPPSPIPPP-----PPRLNSHDR 203
Score = 31.9 bits (69), Expect = 0.73
Identities = 30/90 (33%), Positives = 33/90 (36%), Gaps = 3/90 (3%)
Frame = +2
Query: 593 RXFXGGARXTPNPPXXXXSPXPLPRN-XPRXPXPKVPHAXXPLFNXSXRPP-TPPXP-XR 763
R G P PP P +PR PR P P+ P P + RPP TPP P R
Sbjct: 129 RKSRAGGSSPPPPP-----PPRVPRTPPPRSPPPRRPPMTPP--SPQRRPPRTPPSPEPR 181
Query: 764 *XWACPXXPXSLPPKXLMGPGSHPLVXRXP 853
P P PP L L R P
Sbjct: 182 NPPRTPPSPIPPPPPRLNSHDRRALRARRP 211
Score = 30.3 bits (65), Expect = 2.2
Identities = 32/125 (25%), Positives = 35/125 (28%), Gaps = 3/125 (2%)
Frame = +2
Query: 623 PNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPL---FNXSXRPPTPPXPXR*XWACPXXPX 793
P P P P P P P P + PP PP P +
Sbjct: 81 PPPAHPHHLQHPHPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRK-----SRAGG 135
Query: 794 SLPPKXLMGPGSHPLVXRXPPXXNXESRAXPPXXXLPXELPXRRLSKKRAXXPAXXPLXP 973
S PP P P V R PP + R P P P R P P P
Sbjct: 136 SSPP-----PPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSP 190
Query: 974 XXXPP 988
PP
Sbjct: 191 IPPPP 195
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.079
Identities = 25/91 (27%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Frame = +2
Query: 623 PNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XW--ACPXXPXS 796
P PP P P+P P P P + + PP PP P R P P
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPS-----SGMWPPPPPPPPGRTPGPPGMPGMPPP 329
Query: 797 LPPKXLMGPGSHPLVXRXPPXXNXESRAXPP 889
PP PG + PP PP
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Score = 33.5 bits (73), Expect = 0.24
Identities = 29/120 (24%), Positives = 34/120 (28%)
Frame = +2
Query: 629 PPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPK 808
PP P P P P P + P + PP PP P P P PP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 809 XLMGPGSHPLVXRXPPXXNXESRAXPPXXXLPXELPXRRLSKKRAXXPAXXPLXPXXXPP 988
P PP PP P +P + + P P P PP
Sbjct: 331 --------PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
Score = 32.7 bits (71), Expect = 0.42
Identities = 23/72 (31%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Frame = +2
Query: 623 PNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLP 802
P PP P P P P P P P PP PP R P P P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP-GMGGMPPPPPPGMRYPGGMPPPP---P 362
Query: 803 PK-XLMGPGSHP 835
P+ GPG +P
Sbjct: 363 PRYPSAGPGMYP 374
Score = 29.9 bits (64), Expect = 3.0
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 6/85 (7%)
Frame = +2
Query: 620 TPNPPXXXXSPXPLP--RNXPRX----PXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACP 781
TP PP P P P R P P P P P PP P P P
Sbjct: 317 TPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP--GGMPPPPPPRYPSAGPGMYP 374
Query: 782 XXPXSLPPKXLMGPGSHPLVXRXPP 856
P S PP P H ++ PP
Sbjct: 375 PPPPSRPPAP---PSGHGMIPPPPP 396
Score = 28.7 bits (61), Expect = 6.8
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = +1
Query: 607 GXTXNPQPPXXXXK-PXPPPPKXAXAAXPKGSPRXXXTX*XFXPXPHXXXPXSLXMGLPX 783
G T P PP P PPPP P G P P P P + G+P
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP-----PPPPSRFGPPGMG-GMPP 345
Query: 784 XPXITXPQXXHGPRXPP 834
P P PP
Sbjct: 346 PPPPGMRYPGGMPPPPP 362
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 33.9 bits (74), Expect = 0.18
Identities = 32/125 (25%), Positives = 41/125 (32%)
Frame = +2
Query: 611 ARXTPNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXP 790
+R P PP SP P P P+ + N S RPP PP P P
Sbjct: 124 SRRPPPPPKGTGSPPPPPTGEPQDLSGEG--------NASRRPPPPPK----GTGSPPPP 171
Query: 791 XSLPPKXLMGPGSHPLVXRXPPXXNXESRAXPPXXXLPXELPXRRLSKKRAXXPAXXPLX 970
+ P+ L G+ R PP PP P +L + +R P
Sbjct: 172 PTGEPQDLSTEGN--ASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGS 229
Query: 971 PXXXP 985
P P
Sbjct: 230 PTPPP 234
Score = 33.1 bits (72), Expect = 0.32
Identities = 32/125 (25%), Positives = 40/125 (32%)
Frame = +2
Query: 611 ARXTPNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXP 790
+R P PP SP P P P+ + N S RPP PP P P
Sbjct: 155 SRRPPPPPKGTGSPPPPPTGEPQDLSTEG--------NASRRPPPPPK----GTGTPPPP 202
Query: 791 XSLPPKXLMGPGSHPLVXRXPPXXNXESRAXPPXXXLPXELPXRRLSKKRAXXPAXXPLX 970
+ P+ L G R PP PP P +L + +R P
Sbjct: 203 PTGEPQDLSAEGY--ASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGS 260
Query: 971 PXXXP 985
P P
Sbjct: 261 PPPPP 265
Score = 30.3 bits (65), Expect = 2.2
Identities = 30/125 (24%), Positives = 40/125 (32%)
Frame = +2
Query: 611 ARXTPNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXP 790
+R P PP +P P P P+ + N S RPP PP P P
Sbjct: 30 SRRPPPPPKGTGTPPPPPTGEPQDLSGEG--------NASRRPPPPPK----GTGTPPPP 77
Query: 791 XSLPPKXLMGPGSHPLVXRXPPXXNXESRAXPPXXXLPXELPXRRLSKKRAXXPAXXPLX 970
+ P+ L + R PP PP P +L + +R P
Sbjct: 78 PTGEPQDLSAEEGN-ASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGS 136
Query: 971 PXXXP 985
P P
Sbjct: 137 PPPPP 141
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 614 RXTPNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXP 757
+ P PP +P P P+ P P P+ S PP PP P
Sbjct: 464 KPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 511
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 614 RXTPNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXP 757
+ P PP +P P P+ P P P+ S PP PP P
Sbjct: 471 KPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 518
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 32.3 bits (70), Expect = 0.55
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 656 PLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPP 751
P P + P P P PH P S +PP PP
Sbjct: 92 PPPSDPPPPPPPVAPHQPPPQLATSAQPPQPP 123
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.55
Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 3/86 (3%)
Frame = +1
Query: 607 GXTXNPQPPXXXXKPXPPPPKXAXAAXPKGSPRXXXTX*XFXPXPHXXXPXSLXMGLPXX 786
G Q P P PPPPK + GSP P P P G P
Sbjct: 224 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAA-GSPPPPRTGSPPPPPTGSPPP 282
Query: 787 PXI---TXPQXXHGPRXPPVGXXXPP 855
P P P PP PP
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPP 308
Score = 29.5 bits (63), Expect = 3.9
Identities = 28/123 (22%), Positives = 33/123 (26%)
Frame = +2
Query: 620 TPNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSL 799
+P PP PL + P P P PPT P P P +
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 800 PPKXLMGPGSHPLVXRXPPXXNXESRAXPPXXXLPXELPXRRLSKKRAXXPAXXPLXPXX 979
P P P PP S P P P ++ P P P
Sbjct: 296 SPPPPPPPRGSPPTGSLPPPQAGGS-PPPAGTGSPPPPPRQKRQAPERSPPTGSP--PTG 352
Query: 980 XPP 988
PP
Sbjct: 353 SPP 355
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.55
Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 3/86 (3%)
Frame = +1
Query: 607 GXTXNPQPPXXXXKPXPPPPKXAXAAXPKGSPRXXXTX*XFXPXPHXXXPXSLXMGLPXX 786
G Q P P PPPPK + GSP P P P G P
Sbjct: 245 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAA-GSPPPPRTGSPPPPPTGSPPP 303
Query: 787 PXI---TXPQXXHGPRXPPVGXXXPP 855
P P P PP PP
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPP 329
Score = 29.5 bits (63), Expect = 3.9
Identities = 28/123 (22%), Positives = 33/123 (26%)
Frame = +2
Query: 620 TPNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSL 799
+P PP PL + P P P PPT P P P +
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 800 PPKXLMGPGSHPLVXRXPPXXNXESRAXPPXXXLPXELPXRRLSKKRAXXPAXXPLXPXX 979
P P P PP S P P P ++ P P P
Sbjct: 317 SPPPPPPPRGSPPTGSLPPPQAGGS-PPPAGTGSPPPPPRQKRQAPERSPPTGSP--PTG 373
Query: 980 XPP 988
PP
Sbjct: 374 SPP 376
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.55
Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 3/86 (3%)
Frame = +1
Query: 607 GXTXNPQPPXXXXKPXPPPPKXAXAAXPKGSPRXXXTX*XFXPXPHXXXPXSLXMGLPXX 786
G Q P P PPPPK + GSP P P P G P
Sbjct: 230 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAA-GSPPPPRTGSPPPPPTGSPPP 288
Query: 787 PXI---TXPQXXHGPRXPPVGXXXPP 855
P P P PP PP
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPP 314
Score = 29.5 bits (63), Expect = 3.9
Identities = 28/123 (22%), Positives = 33/123 (26%)
Frame = +2
Query: 620 TPNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSL 799
+P PP PL + P P P PPT P P P +
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 800 PPKXLMGPGSHPLVXRXPPXXNXESRAXPPXXXLPXELPXRRLSKKRAXXPAXXPLXPXX 979
P P P PP S P P P ++ P P P
Sbjct: 302 SPPPPPPPRGSPPTGSLPPPQAGGS-PPPAGTGSPPPPPRQKRQAPERSPPTGSP--PTG 358
Query: 980 XPP 988
PP
Sbjct: 359 SPP 361
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.9 bits (69), Expect = 0.73
Identities = 33/127 (25%), Positives = 44/127 (34%), Gaps = 16/127 (12%)
Frame = +2
Query: 656 PLPRNXPRXPXPKVPHAXXPLFNXSXRP-----------PTPPXPXR*XWACPXXPXSLP 802
P+ N P P P P + PL N + P P PP P P + P
Sbjct: 464 PINANAPPPPGP--PSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPP 521
Query: 803 PKXLMGPGSHPL-----VXRXPPXXNXESRAXPPXXXLPXELPXRRLSKKRAXXPAXXPL 967
P + PG PL PP + PP LP +L ++ ++ P P
Sbjct: 522 PPPM--PGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKS-VPGGPPP 578
Query: 968 XPXXXPP 988
P PP
Sbjct: 579 PPPPPPP 585
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 31.5 bits (68), Expect = 0.97
Identities = 22/48 (45%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 789 GXXGQAHXQRXGXGGVGGRXEXLXSGXXAWGTFGXGXRGXFR-GRGXG 649
G G R G GG GGR G G+FG G RG FR GRG G
Sbjct: 18 GRGGDRGGSRGGFGG-GGRGGY---GGGDRGSFGGGDRGGFRGGRGGG 61
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.97
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 689 PKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPKXLMGPGSHPL 838
P +P PL N +P PP P + P P S PP+ P S P+
Sbjct: 73 PPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRP---PASEPV 119
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 31.5 bits (68), Expect = 0.97
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 689 PKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPKXLMGPGSHPL 838
P +P PL N +P PP P + P P S PP+ P S P+
Sbjct: 295 PPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRP---PASEPV 341
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/77 (31%), Positives = 27/77 (35%), Gaps = 2/77 (2%)
Frame = +2
Query: 632 PXXXXSPXPL-PRNXPRXPXPKVPHAXXPLFNXSXR-PPTPPXPXR*XWACPXXPXSLPP 805
P SP P+ P P+ P P P S PP PP P P P P
Sbjct: 206 PSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPT 265
Query: 806 KXLMGPGSHPLVXRXPP 856
+ GP P R PP
Sbjct: 266 RRPPGPPGPP--TRRPP 280
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/65 (33%), Positives = 24/65 (36%)
Frame = +2
Query: 608 GARXTPNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXX 787
G P PP +P PLP P P P P P PP PP P CP
Sbjct: 26 GPPPCPPPPPPMCAPPPLP--CP--PPPICPPQFCPPPPMCPPPPPPPPPP----MCPPP 77
Query: 788 PXSLP 802
P +P
Sbjct: 78 PPPMP 82
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = -1
Query: 756 GXGGVGGRXEXLXSGXXAWGTFGXGXRGXFRG--RGXGLXXXXGGLGVXRAPPXK 598
G G GG G A+G FG G FRG RG GG G PP +
Sbjct: 517 GYGAYGGGYGGGYGGPGAYGDFGAYGGGGFRGGMRGSPRGGMGGGGGFRGGPPGR 571
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 607 GXTXNP-QPPXXXXKPXPPPPKXAXAAXPKGSP 702
G NP +PP +P PPP A PKG+P
Sbjct: 196 GLNGNPGRPPEAPCEPVTPPPCPPCPAGPKGAP 228
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +2
Query: 629 PPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPK 808
PP P P P P P P P PP PP P P P LPPK
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPP----PPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPK 807
Score = 29.9 bits (64), Expect = 3.0
Identities = 27/101 (26%), Positives = 32/101 (31%)
Frame = +2
Query: 632 PXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPKX 811
P P LP P P P P+ S PP PP P CP P PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPI---SGGPPPPPPP---PGGCPPPPPPPPPGG 779
Query: 812 LMGPGSHPLVXRXPPXXNXESRAXPPXXXLPXELPXRRLSK 934
G PP P +P LP +++ K
Sbjct: 780 FKG---------GPPPPPPPGMFAPMAPVIPDYLPPKKVPK 811
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 604 GGXTXNPQPPXXXXKPXPPPPKXAXAAXPKGSP 702
GG P PP P PPPP P P
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +2
Query: 629 PPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPK 808
PP P P P P P P P PP PP P P P LPPK
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPP----PPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPK 807
Score = 29.9 bits (64), Expect = 3.0
Identities = 27/101 (26%), Positives = 32/101 (31%)
Frame = +2
Query: 632 PXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPKX 811
P P LP P P P P+ S PP PP P CP P PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPI---SGGPPPPPPP---PGGCPPPPPPPPPGG 779
Query: 812 LMGPGSHPLVXRXPPXXNXESRAXPPXXXLPXELPXRRLSK 934
G PP P +P LP +++ K
Sbjct: 780 FKG---------GPPPPPPPGMFAPMAPVIPDYLPPKKVPK 811
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 604 GGXTXNPQPPXXXXKPXPPPPKXAXAAXPKGSP 702
GG P PP P PPPP P P
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +2
Query: 629 PPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPK 808
PP P P P P P P P PP PP P P P LPPK
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPP----PPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPK 390
Score = 29.9 bits (64), Expect = 3.0
Identities = 27/101 (26%), Positives = 32/101 (31%)
Frame = +2
Query: 632 PXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPKX 811
P P LP P P P P+ S PP PP P CP P PP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPI---SGGPPPPPPP---PGGCPPPPPPPPPGG 362
Query: 812 LMGPGSHPLVXRXPPXXNXESRAXPPXXXLPXELPXRRLSK 934
G PP P +P LP +++ K
Sbjct: 363 FKG---------GPPPPPPPGMFAPMAPVIPDYLPPKKVPK 394
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 604 GGXTXNPQPPXXXXKPXPPPPKXAXAAXPKGSP 702
GG P PP P PPPP P P
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 626 NPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPP 751
N P P PLP+N P P P P+ PP PP
Sbjct: 557 NVPIPPPPPPPLPQNLSGAPPP--PPPPPPMLGGPPPPPPPP 596
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 607 GXTXNPQPPXXXXKPXPPPPKXAXAAXPKGSP 702
G P PP K PPPP A P+ +P
Sbjct: 24 GGKKKPPPPKSASKMGPPPPAPAPPTAPEAAP 55
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 622 PQPPXXXXKPXPPPPKXAXAAXPKGSPR 705
P PP P PPPP A A P + R
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSSNAR 29
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 622 PQPPXXXXKPXPPPPKXAXAAXPKGSPR 705
P PP P PPPP A A P + R
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSSNAR 29
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 789 GXXGQAHXQRXGXG-GVGGRXEXLXSGXXAWGTFGXGXRGXFRGRGXG 649
G G R G G G GR +G WG G G RG GRG G
Sbjct: 127 GNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGG 174
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 607 GXTXNPQPPXXXXKPXPPPPKXAXAAXPKGSP 702
G P PP K PPPP A P+ +P
Sbjct: 24 GGKKKPPPPKSASKMGPPPPAPAPPTAPEATP 55
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/93 (26%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Frame = +2
Query: 611 ARXTPNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXP-----XR*XWA 775
+R P P +P P P P P P + S PP PP P
Sbjct: 589 SRPLPQAPNYG-TPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAG 647
Query: 776 CPXXPXSLPPKXLMGPGSHPLVXRXPPXXNXES 874
P P PP GP S ++ + PP + S
Sbjct: 648 APPPPPPPPPSGAGGPAS--VLAKLPPAQDGRS 678
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/93 (26%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Frame = +2
Query: 611 ARXTPNPPXXXXSPXPLPRNXPRXPXPKVPHAXXPLFNXSXRPPTPPXP-----XR*XWA 775
+R P P +P P P P P P + S PP PP P
Sbjct: 415 SRPLPQAPNYG-TPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAG 473
Query: 776 CPXXPXSLPPKXLMGPGSHPLVXRXPPXXNXES 874
P P PP GP S ++ + PP + S
Sbjct: 474 APPPPPPPPPSGAGGPAS--VLAKLPPAQDGRS 504
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +2
Query: 737 PPTPPXPXR*XWACPXXPXSLPPKXLMGPGSHPL-VXRXPPXXNXESRAXPPXXXLPXE 910
PP PP P P P PP P PL V PP + PP LP E
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPP-PPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSE 1399
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/75 (26%), Positives = 27/75 (36%)
Frame = +2
Query: 665 RNXPRXPXPKVPHAXXPLFNXSXRPPTPPXPXR*XWACPXXPXSLPPKXLMGPGSHPLVX 844
R+ P P P P + + PP PP P A P +PP + S L
Sbjct: 1332 RSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPP 1391
Query: 845 RXPPXXNXESRAXPP 889
PP + E + P
Sbjct: 1392 PPPPLPSEEKKNPLP 1406
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 737 PPTPPXPXR*XWACPXXPXSLPPKXLMGPGSHPL 838
PP PP P R P LPP+ L P ++PL
Sbjct: 176 PPVPPRPLRLPQTAAKGPAPLPPRGL--PRTYPL 207
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 737 PPTPPXPXR*XWACPXXPXSLPPKXLMGPGSHPL 838
PP PP P R P LPP+ L P ++PL
Sbjct: 176 PPVPPRPLRLPQTAAKGPAPLPPRGL--PRTYPL 207
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 737 PPTPPXPXR*XWACPXXPXSLPPKXLMGPGSHPL 838
PP PP P R P LPP+ L P ++PL
Sbjct: 176 PPVPPRPLRLPQTAAKGPAPLPPRGL--PRTYPL 207
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 737 PPTPPXPXR*XWACPXXPXSLPPKXLMGPGSHPL 838
PP PP P R P LPP+ L P ++PL
Sbjct: 176 PPVPPRPLRLPQTAAKGPAPLPPRGL--PRTYPL 207
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 737 PPTPPXPXR*XWACPXXPXSLPPKXLMGPGSHPL 838
PP PP P R P LPP+ L P ++PL
Sbjct: 53 PPVPPRPLRLPQTAAKGPAPLPPRGL--PRTYPL 84
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 737 PPTPPXPXR*XWACPXXPXSLPPKXLMGPGSHPL 838
PP PP P R P LPP+ L P ++PL
Sbjct: 176 PPVPPRPLRLPQTAAKGPAPLPPRGL--PRTYPL 207
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 737 PPTPPXPXR*XWACPXXPXSLPPKXLMGPGSHPL 838
PP PP P R P LPP+ L P ++PL
Sbjct: 176 PPVPPRPLRLPQTAAKGPAPLPPRGL--PRTYPL 207
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 737 PPTPPXPXR*XWACPXXPXSLPPKXLMGPGSHPL 838
PP PP P R P LPP+ L P ++PL
Sbjct: 176 PPVPPRPLRLPQTAAKGPAPLPPRGL--PRTYPL 207
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 605 GGARXTPNPPXXXXSPXPLPRNXPRXPXPKVPHA 706
GGA+ P +P P P++ P PK P A
Sbjct: 44 GGAKTPARPTVAKPAPKPTPKSAPAPKSPKSPPA 77
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 6.8
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Frame = +2
Query: 620 TPNPPXXXXSPXPLPRNXPRXPX--PKVPHAXX-PLFNXSXRPPTPPXPXR*XWACPXXP 790
TP P S P P P P P + H P S PP PP P A P P
Sbjct: 753 TPQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGA-PPPP 811
Query: 791 XSLPPKXLM 817
PP LM
Sbjct: 812 PPPPPGGLM 820
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 6.8
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Frame = +2
Query: 620 TPNPPXXXXSPXPLPRNXPRXPX--PKVPHAXX-PLFNXSXRPPTPPXPXR*XWACPXXP 790
TP P S P P P P P + H P S PP PP P A P P
Sbjct: 753 TPQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGA-PPPP 811
Query: 791 XSLPPKXLM 817
PP LM
Sbjct: 812 PPPPPGGLM 820
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 605 GGARXTPNPPXXXXSPXPLPRNXPRXPXPKVPHA 706
GGA+ P +P P P++ P PK P A
Sbjct: 44 GGAKTPARPTVAKPAPKPTPKSAPAPKSPKSPPA 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,807,714
Number of Sequences: 27780
Number of extensions: 138839
Number of successful extensions: 1078
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2605097262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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