BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_G13
(996 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 24 2.5
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 4.3
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 23 5.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 5.7
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 23 5.7
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.8 bits (49), Expect = 2.5
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 631 PXXXXKPXPPPPKXAXAAXPKGSP 702
P +P PP P+ A PK P
Sbjct: 47 PIYIPQPRPPHPRLRREAEPKAEP 70
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 23.0 bits (47), Expect = 4.3
Identities = 17/68 (25%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +1
Query: 631 PXXXXKPXPPPPKXAXAAXPKGSPRXXXTX*XFXPXPHXXXPXSLXMGLP-XXPXITXPQ 807
P +P PP P+ A P+ P + P P P P P P
Sbjct: 214 PVYIPQPRPPHPRLRREAEPEAEPGNNRP--VYIPQPRPPHPRLRREAKPEAKPGNNRPV 271
Query: 808 XXHGPRXP 831
PR P
Sbjct: 272 YIPQPRPP 279
Score = 22.6 bits (46), Expect = 5.7
Identities = 17/68 (25%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +1
Query: 631 PXXXXKPXPPPPKXAXAAXPKGSPRXXXTX*XFXPXPHXXXP-XSLXMGLPXXPXITXPQ 807
P +P PP P+ A P+ P + P P P L P P
Sbjct: 46 PVYIPQPRPPHPRLRREAEPEAEPGNNRP--VYIPQPRPPHPRLRREAELEAEPGNNRPV 103
Query: 808 XXHGPRXP 831
PR P
Sbjct: 104 YISQPRPP 111
Score = 22.6 bits (46), Expect = 5.7
Identities = 17/68 (25%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +1
Query: 631 PXXXXKPXPPPPKXAXAAXPKGSPRXXXTX*XFXPXPHXXXP-XSLXMGLPXXPXITXPQ 807
P +P PP P+ A P+ P + P P P L P P
Sbjct: 102 PVYISQPRPPHPRLRREAEPEAEPGNNRP--VYIPQPRPPHPRLRREAELEAEPGNNRPV 159
Query: 808 XXHGPRXP 831
PR P
Sbjct: 160 YISQPRPP 167
Score = 22.6 bits (46), Expect = 5.7
Identities = 17/68 (25%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +1
Query: 631 PXXXXKPXPPPPKXAXAAXPKGSPRXXXTX*XFXPXPHXXXPXSLXMGLP-XXPXITXPQ 807
P +P PP P+ A P+ P + P P P P P P
Sbjct: 158 PVYISQPRPPHPRLRREAEPEAEPGNNRP--VYIPQPRPPHPRLRREAEPEAEPGNNRPV 215
Query: 808 XXHGPRXP 831
PR P
Sbjct: 216 YIPQPRPP 223
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 22.6 bits (46), Expect = 5.7
Identities = 17/68 (25%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +1
Query: 631 PXXXXKPXPPPPKXAXAAXPKGSPRXXXTX*XFXPXPHXXXPXSLXMGLP-XXPXITXPQ 807
P +P PP P+ A P+ P + P P P P P P
Sbjct: 47 PVYIPQPRPPHPRLRREAEPEAEPGNNRP--VYIPQPRPPHPRLRREAEPEAEPGNNRPV 104
Query: 808 XXHGPRXP 831
PR P
Sbjct: 105 YIPQPRPP 112
Score = 22.2 bits (45), Expect = 7.5
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 631 PXXXXKPXPPPPKXAXAAXPKGSP 702
P +P PP P+ A P+ P
Sbjct: 103 PVYIPQPRPPHPRLRREAEPEAEP 126
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 5.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 633 GGLGVXRAPPXKXRK 589
GG+GV R PP K K
Sbjct: 96 GGIGVLRLPPDKVWK 110
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 22.6 bits (46), Expect = 5.7
Identities = 17/68 (25%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +1
Query: 631 PXXXXKPXPPPPKXAXAAXPKGSPRXXXTX*XFXPXPHXXXPXSLXMGLP-XXPXITXPQ 807
P +P PP P+ A P+ P + P P P P P P
Sbjct: 18 PVYIPQPRPPHPRLRREAEPEAEPGNNRP--VYIPQPRPPHPRLRREAEPEAEPGNNRPV 75
Query: 808 XXHGPRXP 831
PR P
Sbjct: 76 YIPQPRPP 83
Score = 22.6 bits (46), Expect = 5.7
Identities = 17/68 (25%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +1
Query: 631 PXXXXKPXPPPPKXAXAAXPKGSPRXXXTX*XFXPXPHXXXPXSLXMGLP-XXPXITXPQ 807
P +P PP P+ A P+ P + P P P P P P
Sbjct: 74 PVYIPQPRPPHPRLRREAEPEAEPGNNRP--VYIPQPRPPHPRLRREAEPEAEPGNNRPV 131
Query: 808 XXHGPRXP 831
PR P
Sbjct: 132 YIPQPRPP 139
Score = 22.6 bits (46), Expect = 5.7
Identities = 17/68 (25%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +1
Query: 631 PXXXXKPXPPPPKXAXAAXPKGSPRXXXTX*XFXPXPHXXXPXSLXMGLP-XXPXITXPQ 807
P +P PP P+ A P+ P + P P P P P P
Sbjct: 130 PVYIPQPRPPHPRLRREAKPEAEPGNNRP--VYIPQPRPPHPRLRREAEPEAEPGNNRPV 187
Query: 808 XXHGPRXP 831
PR P
Sbjct: 188 YIPQPRPP 195
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,599
Number of Sequences: 438
Number of extensions: 2075
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33016347
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -