Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_G12
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 38 0.008
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 34 0.13
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 34 0.13
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 34 0.13
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 34 0.13
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 34 0.13
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical pr... 32 0.68
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 31 0.90
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 31 0.90
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 31 0.90
Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical pr... 31 1.2
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 30 2.1
U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 29 3.6
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 29 3.6
Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 29 4.8
Z74033-10|CAA98478.1| 805|Caenorhabditis elegans Hypothetical p... 29 6.4
Z47070-3|CAA87341.1| 528|Caenorhabditis elegans Hypothetical pr... 29 6.4
AL022272-5|CAA18355.1| 805|Caenorhabditis elegans Hypothetical ... 29 6.4
AF125442-2|AAD12792.1| 360|Caenorhabditis elegans Serpentine re... 29 6.4
Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical p... 28 8.4
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 28 8.4
Z83113-3|CAB05545.1| 479|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z70213-8|CAA94170.4| 253|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z70213-7|CAH19092.1| 199|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 28 8.4
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 38.3 bits (85), Expect = 0.008
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +1
Query: 334 LNLKIESFSNYRFKPKNSVPAISGEDTKEIEDFTV--QLLERQ-KRIDELKNKLRNTQTV 504
LN KI F N +NS I E K E+ T +++++Q K+IDELK + R +
Sbjct: 1033 LNEKIARFDNIALNERNSTRKIEREKEKLNEELTTAKEIIQKQAKKIDELKEECRKRKNE 1092
Query: 505 VLQLRNDKIGGKLRQPVDAELMLENAKSKQLQQL 606
+L K+ K D L+++ ++L+++
Sbjct: 1093 ASRLER-KLEDKEAMMADCVKELKDSHKERLKEM 1125
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 34.3 bits (75), Expect = 0.13
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Frame = +1
Query: 238 ENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLKIESFSNYRFK---PKNSVPAISG- 405
+ L +I E RK G++ S E K+S+M + + ++ + + + + ++ + G
Sbjct: 2241 QELKDIQKELRKELGELESNVE-KASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKGI 2299
Query: 406 -EDTKEIE-------DFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPVDA 561
E T+E+E + QL QK+ DEL+ K+ N + L +N+ G +L + +D
Sbjct: 2300 LEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKKAALNAQNE--GLELEKKLDE 2357
Query: 562 ELMLENAKSKQLQ 600
+ N+ +L+
Sbjct: 2358 LIGTVNSAENELE 2370
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 34.3 bits (75), Expect = 0.13
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Frame = +1
Query: 238 ENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLKIESFSNYRFK---PKNSVPAISG- 405
+ L +I E RK G++ S E K+S+M + + ++ + + + + ++ + G
Sbjct: 2241 QELKDIQKELRKELGELESNVE-KASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKGI 2299
Query: 406 -EDTKEIE-------DFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPVDA 561
E T+E+E + QL QK+ DEL+ K+ N + L +N+ G +L + +D
Sbjct: 2300 LEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKKAALNAQNE--GLELEKKLDE 2357
Query: 562 ELMLENAKSKQLQ 600
+ N+ +L+
Sbjct: 2358 LIGTVNSAENELE 2370
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 34.3 bits (75), Expect = 0.13
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Frame = +1
Query: 238 ENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLKIESFSNYRFK---PKNSVPAISG- 405
+ L +I E RK G++ S E K+S+M + + ++ + + + + ++ + G
Sbjct: 2241 QELKDIQKELRKELGELESNVE-KASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKGI 2299
Query: 406 -EDTKEIE-------DFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPVDA 561
E T+E+E + QL QK+ DEL+ K+ N + L +N+ G +L + +D
Sbjct: 2300 LEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKKAALNAQNE--GLELEKKLDE 2357
Query: 562 ELMLENAKSKQLQ 600
+ N+ +L+
Sbjct: 2358 LIGTVNSAENELE 2370
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 34.3 bits (75), Expect = 0.13
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Frame = +1
Query: 238 ENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLKIESFSNYRFK---PKNSVPAISG- 405
+ L +I E RK G++ S E K+S+M + + ++ + + + + ++ + G
Sbjct: 2241 QELKDIQKELRKELGELESNVE-KASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKGI 2299
Query: 406 -EDTKEIE-------DFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPVDA 561
E T+E+E + QL QK+ DEL+ K+ N + L +N+ G +L + +D
Sbjct: 2300 LEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKKAALNAQNE--GLELEKKLDE 2357
Query: 562 ELMLENAKSKQLQ 600
+ N+ +L+
Sbjct: 2358 LIGTVNSAENELE 2370
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 34.3 bits (75), Expect = 0.13
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Frame = +1
Query: 238 ENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLKIESFSNYRFK---PKNSVPAISG- 405
+ L +I E RK G++ S E K+S+M + + ++ + + + + ++ + G
Sbjct: 2241 QELKDIQKELRKELGELESNVE-KASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKGI 2299
Query: 406 -EDTKEIE-------DFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPVDA 561
E T+E+E + QL QK+ DEL+ K+ N + L +N+ G +L + +D
Sbjct: 2300 LEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKKAALNAQNE--GLELEKKLDE 2357
Query: 562 ELMLENAKSKQLQ 600
+ N+ +L+
Sbjct: 2358 LIGTVNSAENELE 2370
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 34.3 bits (75), Expect = 0.13
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Frame = +1
Query: 238 ENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLKIESFSNYRFK---PKNSVPAISG- 405
+ L +I E RK G++ S E K+S+M + + ++ + + + + ++ + G
Sbjct: 2241 QELKDIQKELRKELGELESNVE-KASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKGI 2299
Query: 406 -EDTKEIE-------DFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPVDA 561
E T+E+E + QL QK+ DEL+ K+ N + L +N+ G +L + +D
Sbjct: 2300 LEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKKAALNAQNE--GLELEKKLDE 2357
Query: 562 ELMLENAKSKQLQ 600
+ N+ +L+
Sbjct: 2358 LIGTVNSAENELE 2370
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 34.3 bits (75), Expect = 0.13
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Frame = +1
Query: 238 ENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLKIESFSNYRFK---PKNSVPAISG- 405
+ L +I E RK G++ S E K+S+M + + ++ + + + + ++ + G
Sbjct: 2241 QELKDIQKELRKELGELESNVE-KASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKGI 2299
Query: 406 -EDTKEIE-------DFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPVDA 561
E T+E+E + QL QK+ DEL+ K+ N + L +N+ G +L + +D
Sbjct: 2300 LEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKKAALNAQNE--GLELEKKLDE 2357
Query: 562 ELMLENAKSKQLQ 600
+ N+ +L+
Sbjct: 2358 LIGTVNSAENELE 2370
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 34.3 bits (75), Expect = 0.13
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Frame = +1
Query: 238 ENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLKIESFSNYRFK---PKNSVPAISG- 405
+ L +I E RK G++ S E K+S+M + + ++ + + + + ++ + G
Sbjct: 2241 QELKDIQKELRKELGELESNVE-KASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKGI 2299
Query: 406 -EDTKEIE-------DFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPVDA 561
E T+E+E + QL QK+ DEL+ K+ N + L +N+ G +L + +D
Sbjct: 2300 LEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKKAALNAQNE--GLELEKKLDE 2357
Query: 562 ELMLENAKSKQLQ 600
+ N+ +L+
Sbjct: 2358 LIGTVNSAENELE 2370
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical
protein F18C12.1 protein.
Length = 4171
Score = 33.1 bits (72), Expect = 0.30
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 382 NSVPAISGEDTKEIEDFTVQLLERQKRIDELKNKLRNTQTVVLQL 516
NS ++ D K++E+F VQL ++++ +LRN ++++
Sbjct: 618 NSASKVTWNDPKQLEEFIVQLQSAEQKLSNRNRRLRNVHMELIEM 662
>Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical
protein C17E4.2 protein.
Length = 819
Score = 31.9 bits (69), Expect = 0.68
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Frame = +1
Query: 208 MEDDMLETKCENLMNIVVESRKRFG---KMCSEYELKSSSMENKIL----NLKIESFSNY 366
++ D + +++M +++ES K+F K S + S+ K+ N+K E+
Sbjct: 573 LDADSVVKTMQDMMKLLIESEKKFSMVTKQLSMVQQNRESLNEKLTVARENVKSEAAMKS 632
Query: 367 RFKPKN-----SVPAISGEDTKEIEDFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKI 531
+ K + + T ++E ++++ E K+I E ++ N Q L N +I
Sbjct: 633 HLEQKYKRLTLKMKNLEAAMTLKLELESLKVFEETKKIQE-NHRAANAQINKLVDENSQI 691
Query: 532 GGKLRQPVDAELMLENAKSKQLQQ 603
KL Q V + LE KS +L +
Sbjct: 692 VHKLEQIVAKNINLEK-KSAELNE 714
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical
protein R13G10.1 protein.
Length = 1469
Score = 31.5 bits (68), Expect = 0.90
Identities = 28/129 (21%), Positives = 56/129 (43%)
Frame = +1
Query: 205 EMEDDMLETKCENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLKIESFSNYRFKPKN 384
++E D L+ + E+ ++ + S K +E K+ + ++S R K +
Sbjct: 452 QLEWDQLKEQENVCQRTATENLIKYDQKSSADRAKHDDLEKKLSDELLQSM---RAKAEL 508
Query: 385 SVPAISGEDTKEIEDFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPVDAE 564
V E++D T+ + + QKR+DELK L+ ++ N ++ + D +
Sbjct: 509 DV------SESELKDMTIMMEQGQKRVDELKGTLQTMMAENIR-DNTELNAVTTELQDRK 561
Query: 565 LMLENAKSK 591
L + A K
Sbjct: 562 LKFDKAVEK 570
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 31.5 bits (68), Expect = 0.90
Identities = 28/137 (20%), Positives = 58/137 (42%), Gaps = 5/137 (3%)
Frame = +1
Query: 211 EDDMLETKCENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLKIESF-----SNYRFK 375
E++ + K + N V++ K+ EY S +++I +LK E+F +
Sbjct: 214 ENEGIAEKMKESNNAVMDENKKLSDDNLEYRKTMLSQKSEIDSLKAENFKLVSENQLNHD 273
Query: 376 PKNSVPAISGEDTKEIEDFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPV 555
++ A+ E K E ++ +K+I+ LK++ + + Q N+ +
Sbjct: 274 VSKNLAALQSEKLKLTEISQQEISGLKKKIEVLKSENHRLSSQIQQNTNEAAKNHEKLLE 333
Query: 556 DAELMLENAKSKQLQQL 606
D L+LE ++ L
Sbjct: 334 DRVLLLETRYQLEVDDL 350
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 31.5 bits (68), Expect = 0.90
Identities = 28/129 (21%), Positives = 56/129 (43%)
Frame = +1
Query: 205 EMEDDMLETKCENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLKIESFSNYRFKPKN 384
++E D L+ + E+ ++ + S K +E K+ + ++S R K +
Sbjct: 452 QLEWDQLKEQENVCQRTATENLIKYDQKSSADRAKHDDLEKKLSDELLQSM---RAKAEL 508
Query: 385 SVPAISGEDTKEIEDFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPVDAE 564
V E++D T+ + + QKR+DELK L+ ++ N ++ + D +
Sbjct: 509 DV------SESELKDMTIMMEQGQKRVDELKGTLQTMMAENIR-DNTELNAVTTELQDRK 561
Query: 565 LMLENAKSK 591
L + A K
Sbjct: 562 LKFDKAVEK 570
>Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical
protein T05F1.7 protein.
Length = 484
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 421 IEDFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPVDA-ELMLENAKSK 591
+ + +L +RQK+IDE+ L + VLQ +N+ G ++ + ++ + +E AK K
Sbjct: 80 VSEIQEKLPQRQKQIDEILRALNEKRREVLQKQNEIAGFRVNRTENSMKSKMEKAKKK 137
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 30.3 bits (65), Expect = 2.1
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Frame = +1
Query: 322 ENKILNLKIE--SFSNYRFKPKNSVPAISGEDTKEIEDFTVQLL----ERQKRIDELKNK 483
E +ILN ++E + + + KPK+ + A S + KE+++ QL+ E Q+ +D + +
Sbjct: 501 EIQILNKRLEDEALAQQQQKPKDEIVAESEKKLKELKERNKQLVMEKSEIQRELDNINDH 560
Query: 484 LRNT---QTVVLQLRNDKIGGKLRQPVDAELMLENAKSKQLQ 600
L + V+Q R+D + +L D+ L+ E K+LQ
Sbjct: 561 LDQVLVEKATVVQQRDD-MQAELADVGDS-LLTEKDSVKRLQ 600
>U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical
protein B0507.7 protein.
Length = 380
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 409 DTKEIE-DFTVQLLERQKRIDELKNKLRNTQTVVL 510
D EIE + Q+LE+Q+ D K KL+NT+T +L
Sbjct: 38 DKTEIEGELQFQMLEKQQN-DSQKEKLKNTETAIL 71
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 29.5 bits (63), Expect = 3.6
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Frame = +1
Query: 214 DDMLETKCENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLK-IESFSNYRFKPKNSV 390
+D ++ K E + + E + K ++ N NL+ I+ S R K
Sbjct: 578 EDEIKRKGERFVEMEKEMEEERQKATDRTLKLKDALVNSEKNLETIKKESEDREKIVREK 637
Query: 391 PAISGEDTKEIEDFTVQLLERQKRIDELKNKLRNTQTVVLQLRND--KIGGKLRQ 549
A E+ K IED +L E +KR EL+ + + T V ++ ++ GKL +
Sbjct: 638 DAHLEENKKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTKESELSELKGKLTE 692
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 29.5 bits (63), Expect = 3.6
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Frame = +1
Query: 214 DDMLETKCENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLK-IESFSNYRFKPKNSV 390
+D ++ K E + + E + K ++ N NL+ I+ S R K
Sbjct: 580 EDEIKRKGERFVEMEKEMEEERQKATDRTLKLKDALVNSEKNLETIKKESEDREKIVREK 639
Query: 391 PAISGEDTKEIEDFTVQLLERQKRIDELKNKLRNTQTVVLQLRND--KIGGKLRQ 549
A E+ K IED +L E +KR EL+ + + T V ++ ++ GKL +
Sbjct: 640 DAHLEENKKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTKESELSELKGKLTE 694
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 3.6
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Frame = +1
Query: 214 DDMLETKCENLMNIVVESRKRFGKMCSEYELKSSSMENKILNLK-IESFSNYRFKPKNSV 390
+D ++ K E + + E + K ++ N NL+ I+ S R K
Sbjct: 580 EDEIKRKGERFVEMEKEMEEERQKATDRTLKLKDALVNSEKNLETIKKESEDREKIVREK 639
Query: 391 PAISGEDTKEIEDFTVQLLERQKRIDELKNKLRNTQTVVLQLRND--KIGGKLRQ 549
A E+ K IED +L E +KR EL+ + + T V ++ ++ GKL +
Sbjct: 640 DAHLEENKKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTKESELSELKGKLTE 694
>Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical
protein F19B6.4 protein.
Length = 695
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/81 (25%), Positives = 37/81 (45%)
Frame = -2
Query: 575 SNINSASTG*RSLPPILSFLSCKTTVCVFLNLFFNSSIRFCRSNSWTVKSSISFVSSPLI 396
S ++ S+ R P F +T F +F SSI+ R S + I + ++
Sbjct: 386 STHSTLSSSRREHPETAPFTFPRTWTAQFFFIFQRSSIQLWRERSVLLVKLIQTLIMSIM 445
Query: 395 AGTEFFGLKR*FEKDSIFKFK 333
G+ ++GL+ +K S+ FK
Sbjct: 446 IGSTYYGLE--IDKKSLPSFK 464
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +1
Query: 370 FKPKN----SVPAISGEDTKEIE-DFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIG 534
F+PK V A+ E KE+ D + + ++R+ + E NK++ T + L+N+K
Sbjct: 532 FQPKEPKVAGVEAVEIESKKELTIDDSAETMKRKITL-EFANKVKETLAQLSDLKNEKPK 590
Query: 535 GKLRQPVDAELMLENAKS 588
+Q +L+ E KS
Sbjct: 591 KSKKQKPSQQLVPEKVKS 608
>Z74033-10|CAA98478.1| 805|Caenorhabditis elegans Hypothetical
protein H12C20.2a protein.
Length = 805
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 220 MLETKCENLMNIVVESRKRFGKMCSEYELKSSSMENK-ILNLKIESFSNYRF-KPKNSVP 393
MLE + L + K + K+ + SS+E++ I+NL +SFSN F K+S P
Sbjct: 343 MLEKERHLLAVVRASMMKTYLKIVGSHSTVRSSVEDRRIMNLSQQSFSNASFMSSKSSTP 402
>Z47070-3|CAA87341.1| 528|Caenorhabditis elegans Hypothetical
protein T09B9.4 protein.
Length = 528
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 231 EMRESNEHCSGIEKTFRENVQRIRTQKLVH 320
E+ +CS EK+++E + R+R +K+ H
Sbjct: 251 EIERLRTYCSRAEKSYQEELMRLRAEKVDH 280
>AL022272-5|CAA18355.1| 805|Caenorhabditis elegans Hypothetical
protein H12C20.2a protein.
Length = 805
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 220 MLETKCENLMNIVVESRKRFGKMCSEYELKSSSMENK-ILNLKIESFSNYRF-KPKNSVP 393
MLE + L + K + K+ + SS+E++ I+NL +SFSN F K+S P
Sbjct: 343 MLEKERHLLAVVRASMMKTYLKIVGSHSTVRSSVEDRRIMNLSQQSFSNASFMSSKSSTP 402
>AF125442-2|AAD12792.1| 360|Caenorhabditis elegans Serpentine
receptor, class v protein19 protein.
Length = 360
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 54 FNLNYNVEYVFFFQISPIFIVILVNTRSFTAESTYFLKTYSTV 182
+ + V Y F I+PI+I+ILV + F T+ T+
Sbjct: 19 YQWTFLVYYALFVAITPIYIIILVCILKIRKHAAMFKTTFYTI 61
>Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical
protein F45G2.2b protein.
Length = 390
Score = 28.3 bits (60), Expect = 8.4
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +1
Query: 307 KSSSMENKILNLKIESFSNY-RFKPKNSVPAISGEDTKEIEDFTVQL-LERQKRIDELKN 480
++ +E NLK ES SNY K + + + ++ KE ++ ++ +E + ++ K
Sbjct: 59 RNKEIEELNRNLKAESESNYENAKKASELERLREKEKKEWDEKERRMQMEAENEANQHKT 118
Query: 481 KLRNTQTVVLQLRND--KIGG--KLRQPVDAELMLENAKSKQ 594
+ + + L+ D K+ K ++ ++AEL+ E A KQ
Sbjct: 119 QTEKLKDQISTLQTDFEKVSAQRKAQEQMNAELVDEVASFKQ 160
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 28.3 bits (60), Expect = 8.4
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +1
Query: 307 KSSSMENKILNLKIESFSNY-RFKPKNSVPAISGEDTKEIEDFTVQL-LERQKRIDELKN 480
++ +E NLK ES SNY K + + + ++ KE ++ ++ +E + ++ K
Sbjct: 904 RNKEIEELNRNLKAESESNYENAKKASELERLREKEKKEWDEKERRMQMEAENEANQHKT 963
Query: 481 KLRNTQTVVLQLRND--KIGG--KLRQPVDAELMLENAKSKQ 594
+ + + L+ D K+ K ++ ++AEL+ E A KQ
Sbjct: 964 QTEKLKDQISTLQTDFEKVSAQRKAQEQMNAELVDEVASFKQ 1005
>Z83113-3|CAB05545.1| 479|Caenorhabditis elegans Hypothetical
protein K08H10.6 protein.
Length = 479
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 75 EYVFFFQISPIFIVILVNTRSFTAESTYFL 164
+Y+FF + P + ILVN +F TY L
Sbjct: 196 KYIFFIETIPCVLHILVNITTFHDSPTYLL 225
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 28.3 bits (60), Expect = 8.4
Identities = 22/115 (19%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Frame = +1
Query: 199 C*EMEDDMLETKCENLMNIVVESRKRFGKMC----SEYELKSSSMENKILNLKIESFSNY 366
C ++ D + E + + L+++ S + +Y+++S M + +++ S S
Sbjct: 622 CQKLRDQLKEEQIQQLVSLRETSEVMHQESARHQEEKYQIQSKLMSTEAEVIELRS-SID 680
Query: 367 RFKPKNSVPAISGEDTKEI-EDFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDK 528
+ + V + S D K I ED+ ++ + ++ ++L++ L +++ +L L+N +
Sbjct: 681 SLQAEVRVQSDSAADQKHILEDYLRKIRQAEETNEKLRSDLASSEEQILDLKNQQ 735
>Z70213-8|CAA94170.4| 253|Caenorhabditis elegans Hypothetical
protein ZK930.3a protein.
Length = 253
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +1
Query: 406 EDTKEIEDFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPVDAELMLENAK 585
E+ E+E+ + E K IDEL NK + + ++QL N R+ AE ++ +
Sbjct: 43 EELSELENTEKFIKETAKTIDEL-NKEKEEHSEIIQLINQDKSDLEREIAAAETEKKDRE 101
Query: 586 SKQLQQL*SYEYGNQMTQFTGDK 654
SK +++ YE ++ + T +K
Sbjct: 102 SKIVKR---YEALLKLIESTNEK 121
>Z70213-7|CAH19092.1| 199|Caenorhabditis elegans Hypothetical
protein ZK930.3b protein.
Length = 199
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +1
Query: 406 EDTKEIEDFTVQLLERQKRIDELKNKLRNTQTVVLQLRNDKIGGKLRQPVDAELMLENAK 585
E+ E+E+ + E K IDEL NK + + ++QL N R+ AE ++ +
Sbjct: 19 EELSELENTEKFIKETAKTIDEL-NKEKEEHSEIIQLINQDKSDLEREIAAAETEKKDRE 77
Query: 586 SKQLQQL*SYEYGNQMTQFTGDK 654
SK +++ YE ++ + T +K
Sbjct: 78 SKIVKR---YEALLKLIESTNEK 97
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 28.3 bits (60), Expect = 8.4
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +1
Query: 238 ENLMNIVVESRKRFGKMCSEY--ELKSSSMENKILNLKIESFSNYRFKPKNSVPAISGED 411
E LM ++E R + + Y +L+++ + K + + + ++P
Sbjct: 37 EQLMMNMLEDRDKLQEQLENYKVQLENAGLRTKEVEKERDMMKRQFEVHTQNLPQELQTM 96
Query: 412 TKEIEDFTVQLLERQKRIDELKNKLRNTQTVVLQL 516
T+E+ QLLE+ + I ELK + NT+ ++ L
Sbjct: 97 TRELCLLKEQLLEKDEEIVELKAERNNTRLLLEHL 131
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 28.3 bits (60), Expect = 8.4
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +1
Query: 238 ENLMNIVVESRKRFGKMCSEY--ELKSSSMENKILNLKIESFSNYRFKPKNSVPAISGED 411
E LM ++E R + + Y +L+++ + K + + + ++P
Sbjct: 37 EQLMMNMLEDRDKLQEQLENYKVQLENAGLRTKEVEKERDMMKRQFEVHTQNLPQELQTM 96
Query: 412 TKEIEDFTVQLLERQKRIDELKNKLRNTQTVVLQL 516
T+E+ QLLE+ + I ELK + NT+ ++ L
Sbjct: 97 TRELCLLKEQLLEKDEEIVELKAERNNTRLLLEHL 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,355,245
Number of Sequences: 27780
Number of extensions: 395207
Number of successful extensions: 1195
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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