Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_G10
         (948 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   4.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   9.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   9.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   9.3  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 294 EKTSHTSTLNLKHKMNAIVVV 232
           E    T TLNLKH   A++V+
Sbjct: 56  EDAEDTQTLNLKHLRAAVLVL 76


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 625 FPLEAPSCALLFDLPLTDTVAYXIPVRLFSPSGSVA 732
           FPL   SC L F +P+       I + L   S S+A
Sbjct: 203 FPLYQLSCILFFLIPMVFIAVLYIRIGLRIQSDSLA 238


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 569 STLKSEVAKPDRTIKIPGVSPWKLPRALSCST 664
           S++  +VA   R   IP +SP    +ALS  T
Sbjct: 79  SSVSLQVANLLRLFHIPQISPASTAKALSDKT 110


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 294 EKTSHTSTLNLKHKM 250
           ++  H+STL++ HKM
Sbjct: 238 DENRHSSTLDIDHKM 252


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 569 STLKSEVAKPDRTIKIPGVSPWKLPRALSCST 664
           S++  +VA   R   IP +SP    +ALS  T
Sbjct: 169 SSVSLQVANLLRLFHIPQISPASTAKALSDKT 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,545
Number of Sequences: 438
Number of extensions: 5147
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31081323
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)