Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_G08
         (966 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_1031 - 22427691-22428086                                         32   0.79 
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434...    30   2.4  
04_04_0206 + 23595268-23595279,23595475-23596317,23597037-235970...    29   4.2  
12_02_1036 - 25587313-25587890,25589209-25589272,25589356-255894...    28   9.7  

>10_08_1031 - 22427691-22428086
          Length = 131

 Score = 31.9 bits (69), Expect = 0.79
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -1

Query: 189 PVQRPSDVAXRRRPSHPGPRDPSHMLGRSRCIAG*PGTVPLRCXSAPKILRXPL 28
           P+Q    ++ R R +H GP+ P+   G  R   G P   P      P +LR PL
Sbjct: 14  PLQPRVVLSPRSRRAHLGPKPPARHYGVRRVGHGVPAPAPPSPPPHPMVLRPPL 67


>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
            26643948-26644120,26644227-26644308,26644623-26644758,
            26644777-26644833,26644905-26645120,26645939-26646335,
            26646458-26646544,26647063-26647324,26648892-26648972,
            26649176-26650350
          Length = 1221

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 18/50 (36%), Positives = 21/50 (42%)
 Frame = -2

Query: 191  GQSRGRATSLXAAGRRIRAHATPATCWGGRVASQGNLAQSRCAARVPXKS 42
            G SRG A  L AAGR +     P     G  A  G+ A    AA +   S
Sbjct: 1062 GSSRGGAVGLSAAGRMLETPGQPHVAPNGWPAGHGHPASGTLAAAMACSS 1111


>04_04_0206 +
           23595268-23595279,23595475-23596317,23597037-23597088,
           23597328-23597395,23597482-23597585,23597681-23597768,
           23598405-23598722
          Length = 494

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 231 SGRESSRRVTLVGRPVQRPSDVAXRRRPSHPGPRDPSHM 115
           SGR  S R+ +V    Q+P++ A RR      P+ P+ M
Sbjct: 222 SGRGPSERINMVNNITQKPANQATRRNAVKIEPQVPTEM 260


>12_02_1036 -
           25587313-25587890,25589209-25589272,25589356-25589448,
           25589533-25589683,25590474-25590539,25590594-25590907
          Length = 421

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +1

Query: 103 RPPQHVAGVAWARMRRPA--AXSDVARPLDWPXY*RDSPRRLATRQTRISI 249
           RP + V G AW  +RRP+    SDV      P + RD+ ++L     R SI
Sbjct: 318 RPTEEVRGEAWHYLRRPSEDGTSDVMEGHADPKFQRDN-KQLENHVDRYSI 367


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,074,239
Number of Sequences: 37544
Number of extensions: 194584
Number of successful extensions: 602
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)