Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_G06
         (925 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   3.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.9  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   6.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   6.8  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   9.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   9.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   9.0  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 392 MSIVSVRCTKTVQTLVRELSPLRLYASNHRLRPTTLRQAE 511
           M+  S +   T+QTL  ++SP R     +RL    L Q++
Sbjct: 398 MATTSPQSQSTIQTLRPQVSPDRTSPMEYRLYNPALIQSQ 437


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -1

Query: 592 LGGLLNLENMCTQRKSLKETLQRLMLVFRLSQCRWP*AMVRSIQAQWR 449
           L    N+E   +   S+   L+RL L+F  S  +W  +   ++   WR
Sbjct: 462 LSAAYNVELHNSSPFSIYSFLERLNLIFMSSSLQW--SSTHTLDVAWR 507


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -1

Query: 592 LGGLLNLENMCTQRKSLKETLQRLMLVFRLSQCRWP*AMVRSIQAQWR 449
           L    N+E   +   S+   L+RL L+F  S  +W  +   ++   WR
Sbjct: 500 LSAAYNVELHNSSPFSIYSFLERLNLIFMSSSLQW--SSTHTLDVAWR 545


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 396 LIRIFGENKIWSVLSGHLIS 337
           LI IFGE+   S +S HLIS
Sbjct: 246 LITIFGESAGGSSVSLHLIS 265


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 396 LIRIFGENKIWSVLSGHLIS 337
           LI IFGE+   S +S HLIS
Sbjct: 246 LITIFGESAGGSSVSLHLIS 265


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 767 NDIRYTITFIQKNVAIIQVYTTN-PVNVHKS*RN 669
           NDI   I +++KN+  I +   N  +N+  + +N
Sbjct: 69  NDILKVIEWVEKNLGAIDILINNATINIDVTLQN 102


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 286 SMNCSNGRLLLKDIILNGNKVSTQDTPDFVFAE 384
           SM C NG++L ++ I N +         F FAE
Sbjct: 293 SMICLNGQVLKRESIHNSSNARFLMDSMFDFAE 325


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 127 PDFDYRSHSNKKNMKEITLFVL 192
           PD +YR+   ++ MK I  F L
Sbjct: 199 PDLNYRNSDVREEMKNIMKFWL 220


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,383
Number of Sequences: 438
Number of extensions: 5892
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)