Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_G04
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0323 - 2459854-2460306                                           98   7e-21
01_01_0263 + 2136858-2137331                                           97   1e-20
11_01_0317 - 2365493-2365786,2365825-2365953                           97   2e-20
01_01_0939 - 7404209-7404490,7405057-7405368,7405470-7405609,740...    30   2.9  

>12_01_0323 - 2459854-2460306
          Length = 150

 Score = 98.3 bits (234), Expect = 7e-21
 Identities = 48/86 (55%), Positives = 62/86 (72%)
 Frame = +2

Query: 296 RLAK*CRVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKG 475
           R  K  +VYR+++V+++ERI REK NG+T  VGIHPSK V+ KLK++KDRKAILDR+A G
Sbjct: 65  REGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASG 124

Query: 476 RLAALGKDKGKYTEETATAMGGLLNQ 553
           R  A  K KGK+T E   A G  L +
Sbjct: 125 R--AADKAKGKFTAEDVAAAGASLQE 148



 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = +1

Query: 202 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 315
           S ELR K+NV+S+PIRKDDEVQVVRG YKG++ GKV+Q
Sbjct: 35  STELRHKYNVRSIPIRKDDEVQVVRGSYKGRE-GKVVQ 71



 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +3

Query: 99  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 200
           MK N +VTSSRRK RK HF+APS +RRVLMS+ L
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34


>01_01_0263 + 2136858-2137331
          Length = 157

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 48/83 (57%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
 Frame = +2

Query: 296 RLAK*CRVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKG 475
           R  K  +VYR+++V+++ERI REK NG+T  VGIHPSK V+ KLK++KDRKAILDR+A+G
Sbjct: 65  REGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKARG 124

Query: 476 RLAALGKDKGKYT-EETATAMGG 541
           R  A  K KGK+T ++ A A GG
Sbjct: 125 R--AADKAKGKFTADDVAAAAGG 145



 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = +1

Query: 202 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 315
           S ELR K+NV+S+PIRKDDEVQVVRG YKG++ GKV+Q
Sbjct: 35  SSELRHKYNVRSIPIRKDDEVQVVRGSYKGRE-GKVVQ 71



 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +3

Query: 99  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 200
           MK N +VTSSRRK RK HF+APS +RRVLMS+ L
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34


>11_01_0317 - 2365493-2365786,2365825-2365953
          Length = 140

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 47/81 (58%), Positives = 60/81 (74%)
 Frame = +2

Query: 296 RLAK*CRVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKG 475
           R  K  +VYR+++V+++ERI REK NG+T  VGIHPSK V+ KLK++KDRKAILDR+A G
Sbjct: 52  REGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASG 111

Query: 476 RLAALGKDKGKYTEETATAMG 538
           R  A  K KGK+T E   A G
Sbjct: 112 R--AADKAKGKFTAEDVAAAG 130



 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +3

Query: 99  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 200
           MK N +VTSSRRK RK HF+APS +RRVLMS+ L
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34


>01_01_0939 -
           7404209-7404490,7405057-7405368,7405470-7405609,
           7406226-7406289,7406378-7406616,7406957-7406983,
           7407590-7407749
          Length = 407

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +1

Query: 253 DDEVQVVRGHYKGQQVGKVMQGVS*KVCCIH*EDSKRKGQWCNSICR 393
           DD V    G ++ ++V +++     ++ C+  +DSK+KG+  N +C+
Sbjct: 16  DDGVSCFSGAFRVKRVLRMVLNKVLELFCVKKKDSKKKGKAINPLCK 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,423,686
Number of Sequences: 37544
Number of extensions: 289969
Number of successful extensions: 724
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)