Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_G04
(913 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26 pro... 107 4e-23
CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein. 107 4e-23
BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein. 107 4e-23
AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26 p... 107 4e-23
L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26 pro... 105 2e-22
BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-l... 105 2e-22
BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-l... 105 2e-22
>X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 107 bits (258), Expect = 4e-23
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = +2
Query: 287 KVNRLAK*CRVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 466
K ++ K +VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 467 AKGRLAALGKDKGKYTEETATAM 535
AK R +GK+KGKY EET M
Sbjct: 123 AKSR--QVGKEKGKYKEETIEKM 143
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +1
Query: 196 PWSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 315
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+Q
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQ 72
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 99 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 200
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein.
Length = 145
Score = 107 bits (258), Expect = 4e-23
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = +2
Query: 287 KVNRLAK*CRVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 466
K ++ K +VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 467 AKGRLAALGKDKGKYTEETATAM 535
AK R +GK+KGKY EET M
Sbjct: 123 AKSR--QVGKEKGKYKEETIEKM 143
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +1
Query: 196 PWSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 315
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+Q
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQ 72
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 99 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 200
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein.
Length = 145
Score = 107 bits (258), Expect = 4e-23
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = +2
Query: 287 KVNRLAK*CRVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 466
K ++ K +VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 467 AKGRLAALGKDKGKYTEETATAM 535
AK R +GK+KGKY EET M
Sbjct: 123 AKSR--QVGKEKGKYKEETIEKM 143
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +1
Query: 196 PWSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 315
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+Q
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQ 72
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 99 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 200
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 107 bits (258), Expect = 4e-23
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = +2
Query: 287 KVNRLAK*CRVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 466
K ++ K +VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 467 AKGRLAALGKDKGKYTEETATAM 535
AK R +GK+KGKY EET M
Sbjct: 123 AKSR--QVGKEKGKYKEETIEKM 143
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +1
Query: 196 PWSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 315
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+Q
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQ 72
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 99 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 200
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 105 bits (252), Expect = 2e-22
Identities = 50/83 (60%), Positives = 64/83 (77%)
Frame = +2
Query: 287 KVNRLAK*CRVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 466
K ++ K +VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 467 AKGRLAALGKDKGKYTEETATAM 535
AK R +GK+K KY EET M
Sbjct: 123 AKSR--QVGKEKSKYKEETIEKM 143
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +1
Query: 196 PWSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 315
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+Q
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQ 72
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 99 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 200
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 105 bits (252), Expect = 2e-22
Identities = 50/83 (60%), Positives = 64/83 (77%)
Frame = +2
Query: 287 KVNRLAK*CRVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 466
K ++ K +VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 467 AKGRLAALGKDKGKYTEETATAM 535
AK R +GK+KGKY EE M
Sbjct: 123 AKSR--QVGKEKGKYKEELIEKM 143
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +1
Query: 196 PWSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 315
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+Q
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQ 72
Score = 58.8 bits (136), Expect = 3e-08
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +3
Query: 99 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 200
MKFN VTS R KNRKRHF+APSH+RR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPL 34
>BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 105 bits (252), Expect = 2e-22
Identities = 50/83 (60%), Positives = 64/83 (77%)
Frame = +2
Query: 287 KVNRLAK*CRVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 466
K ++ K +VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 467 AKGRLAALGKDKGKYTEETATAM 535
AK R +GK+KGKY EE M
Sbjct: 123 AKSR--QVGKEKGKYKEELIEKM 143
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +1
Query: 196 PWSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 315
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+Q
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQ 72
Score = 58.8 bits (136), Expect = 3e-08
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +3
Query: 99 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 200
MKFN VTS R KNRKRHF+APSH+RR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPL 34
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,543,923
Number of Sequences: 237096
Number of extensions: 1564820
Number of successful extensions: 3918
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3910
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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