Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_G04
         (913 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p pro...   128   8e-30
AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA...   128   8e-30
AE013599-1457|AAF58528.2| 1977|Drosophila melanogaster CG13162-P...    35   0.13 

>AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p
           protein.
          Length = 149

 Score =  128 bits (310), Expect = 8e-30
 Identities = 60/80 (75%), Positives = 69/80 (86%)
 Frame = +2

Query: 287 KVNRLAK*CRVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 466
           K N++ K  + YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDRKAIL+RR
Sbjct: 63  KGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILERR 122

Query: 467 AKGRLAALGKDKGKYTEETA 526
            KGRLAALGKDKGKYTEETA
Sbjct: 123 GKGRLAALGKDKGKYTEETA 142



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +1

Query: 196 PWSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 315
           P SKELRQK+NV+SMPIR+DDEVQV+RGH+KG QVGKV+Q
Sbjct: 33  PLSKELRQKYNVRSMPIRRDDEVQVIRGHFKGNQVGKVVQ 72



 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +3

Query: 99  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 200
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PL
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPL 34


>AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA
           protein.
          Length = 149

 Score =  128 bits (310), Expect = 8e-30
 Identities = 60/80 (75%), Positives = 69/80 (86%)
 Frame = +2

Query: 287 KVNRLAK*CRVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 466
           K N++ K  + YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDRKAIL+RR
Sbjct: 63  KGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILERR 122

Query: 467 AKGRLAALGKDKGKYTEETA 526
            KGRLAALGKDKGKYTEETA
Sbjct: 123 GKGRLAALGKDKGKYTEETA 142



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +1

Query: 196 PWSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 315
           P SKELRQK+NV+SMPIR+DDEVQV+RGH+KG QVGKV+Q
Sbjct: 33  PLSKELRQKYNVRSMPIRRDDEVQVIRGHFKGNQVGKVVQ 72



 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +3

Query: 99  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 200
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PL
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPL 34


>AE013599-1457|AAF58528.2| 1977|Drosophila melanogaster CG13162-PA
            protein.
          Length = 1977

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -1

Query: 403  RVNADICCCTIGLFSLNPLNVYNKLFTIHPASLC 302
            RV  + CCCT G  SL+ +N+ +   TI PA+ C
Sbjct: 1769 RVMVNCCCCTEGRLSLSKMNLLDMFDTILPANPC 1802


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,746,354
Number of Sequences: 53049
Number of extensions: 498000
Number of successful extensions: 1709
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)