Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_G03
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1143 + 30709825-30709926,30710105-30710260,30710356-307104...    31   1.7  
08_02_0776 - 21083181-21083187,21083256-21083683,21083800-210840...    28   8.9  

>03_05_1143 + 30709825-30709926,30710105-30710260,30710356-30710439,
            30710769-30710882,30711019-30711111,30711888-30711977,
            30712157-30712227,30712300-30712374,30712481-30712568,
            30712748-30712806,30712893-30712956,30713030-30713095,
            30713283-30713435,30713522-30713626,30713739-30713974,
            30714104-30714173,30714286-30714339,30714501-30714557,
            30714662-30714741,30716056-30717919
          Length = 1226

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
 Frame = +1

Query: 25   YREFLKIYXTLASDLGASIRNKCMEL---EEILQSLKSRLNHVVLDENIVLSPEANSMEA 195
            Y + L++  T A +L ASI++ C+EL   +E + +LK+ L+     +  + S   + + +
Sbjct: 883  YFKLLEMASTKAEELSASIQHHCLELKHDQEDMNALKAELSQSQESKEALESKYFSPVAS 942

Query: 196  QLEHDLDTDCQEDLSLQEFLELLHSQNK 279
                DL T           LELL+ + +
Sbjct: 943  CWNLDLKTKALVGSKFDVSLELLNQKKE 970


>08_02_0776 -
           21083181-21083187,21083256-21083683,21083800-21084048,
           21084172-21084248,21084351-21084483
          Length = 297

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 112 LQSLKSRLNHVVLDENIVLSPEANSME-AQLEHDLDTDCQEDLS 240
           LQS+  R   V+ D ++  SPEA + E ++L   +D +C    S
Sbjct: 169 LQSVLRRAQQVLADHSLASSPEAATAELSELASAVDIECMSSSS 212


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,971,857
Number of Sequences: 37544
Number of extensions: 189774
Number of successful extensions: 379
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)