Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_G02
         (936 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003231-1|AAO24986.1|  614|Drosophila melanogaster LP08529p pro...    37   0.046
AE014297-200|AAF52055.2|  614|Drosophila melanogaster CG12163-PA...    37   0.046
AE014297-199|AAN13266.1|  475|Drosophila melanogaster CG12163-PB...    37   0.046
AE013599-2873|AAF57567.1|   79|Drosophila melanogaster CG10460-P...    36   0.080

>BT003231-1|AAO24986.1|  614|Drosophila melanogaster LP08529p
           protein.
          Length = 614

 Score = 36.7 bits (81), Expect = 0.046
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +2

Query: 116 YKDDADRELHYQSFKKHLAEINQLNEKNPYTT-FGINKFADYTPEEQQSRLGL 271
           Y   A+R++  + F+++L  I +LN     +  +GI +FAD T  E + R GL
Sbjct: 319 YVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL 371


>AE014297-200|AAF52055.2|  614|Drosophila melanogaster CG12163-PA,
           isoform A protein.
          Length = 614

 Score = 36.7 bits (81), Expect = 0.046
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +2

Query: 116 YKDDADRELHYQSFKKHLAEINQLNEKNPYTT-FGINKFADYTPEEQQSRLGL 271
           Y   A+R++  + F+++L  I +LN     +  +GI +FAD T  E + R GL
Sbjct: 319 YVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL 371


>AE014297-199|AAN13266.1|  475|Drosophila melanogaster CG12163-PB,
           isoform B protein.
          Length = 475

 Score = 36.7 bits (81), Expect = 0.046
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +2

Query: 116 YKDDADRELHYQSFKKHLAEINQLNEKNPYTT-FGINKFADYTPEEQQSRLGL 271
           Y   A+R++  + F+++L  I +LN     +  +GI +FAD T  E + R GL
Sbjct: 180 YVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL 232


>AE013599-2873|AAF57567.1|   79|Drosophila melanogaster CG10460-PA
           protein.
          Length = 79

 Score = 35.9 bits (79), Expect = 0.080
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +2

Query: 119 KDDADRELHYQSFKKHLAEINQLNEKNPYT-TFGINKFADYTPEEQQSRLGLRLP 280
           ++D  R   Y   K  + E N+  EK   T   GIN  AD TPEE   R G ++P
Sbjct: 23  EEDLMRRRIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEFAQRCGKKVP 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,225,644
Number of Sequences: 53049
Number of extensions: 371772
Number of successful extensions: 1462
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4628299878
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)