Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_G02
         (936 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical ...    44   1e-04
AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical ...    38   0.008
Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical pr...    33   0.29 
U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical p...    31   0.90 
AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical...    31   1.2  
U80437-10|AAN84839.1|  656|Caenorhabditis elegans Hypothetical p...    29   3.6  

>AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical
           protein Y51A2D.8 protein.
          Length = 386

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
 Frame = +2

Query: 32  EFLKILIIDLNQRQRIVRNFXS--KNITGXYKDDADRELHYQSFKKHLAEINQLNEKNPY 205
           EF +I I D +  +++ + F    K     YKD+++ +  + +F K    +++LN K+  
Sbjct: 25  EFFEINI-DRDHPEKLYKAFEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKA 83

Query: 206 ----TTFGINKFADYTPEEQQSRLGLRLPAKKT 292
               T FGINKF+D +  E   RL   +P+  T
Sbjct: 84  AGYDTQFGINKFSDLSTAEFHGRLSNVVPSNNT 116


>AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical
           protein Y51A2D.1 protein.
          Length = 382

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
 Frame = +2

Query: 32  EFLKILIIDLNQRQRIVRNFXS--KNITGXYKDDADRELHYQSFKKHLAEINQLNEK--- 196
           EF +I I D +  +++ + F    K  +  YK +A+ +L  Q+F K    + +LN+    
Sbjct: 26  EFFEINI-DRDHPEKVYQEFVEFKKKFSRTYKSEAENQLRLQNFVKSRNNVVRLNKNAQK 84

Query: 197 -NPYTTFGINKFADYTPEEQQSRLGLRLPAKKT 292
               + F +N+F+D T  E   RL  R P   T
Sbjct: 85  AGRNSNFAVNQFSDLTTSELHQRLS-RFPPNLT 116


>Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical
           protein C50F4.3 protein.
          Length = 374

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
 Frame = +2

Query: 53  IDLNQRQRIVRNFXSKNIT--GXYKDDADRELHYQSF---KKHLAEINQLNEKNPYTT-F 214
           ID N  +++ + F    +     YKD+ +++  +Q F      + ++N+  +K  + T +
Sbjct: 35  IDRNNPEKLYKEFEDFIVKYKRNYKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKY 94

Query: 215 GINKFADYTPEE 250
           GINKF+D + +E
Sbjct: 95  GINKFSDLSKKE 106


>U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical
           protein R09F10.1 protein.
          Length = 383

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 116 YKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQ 256
           Y    + E  YQ F +++ E     E+N      +N+F D+T EE Q
Sbjct: 93  YTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQ 139


>AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical
           protein Y113G7B.15 protein.
          Length = 328

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +2

Query: 116 YKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSR 262
           Y+  A+++     F K+  +I +LN K        TFG NKFAD   +E  +R
Sbjct: 7   YRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSAR 59


>U80437-10|AAN84839.1|  656|Caenorhabditis elegans Hypothetical
           protein C43E11.11 protein.
          Length = 656

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +2

Query: 71  QRIVRNFXSKNITGXYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFAD 235
           Q++ R F SK  +    +D+ R L        LA +++L E+N ++T   N F D
Sbjct: 298 QQLGRVFNSKGDSSPALNDSLRPLKNSLLTHSLARLHKLVEENDFSTAHANAFVD 352


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,588,702
Number of Sequences: 27780
Number of extensions: 187822
Number of successful extensions: 660
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)