Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_G01
         (906 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.9  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   3.8  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              23   5.1  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   5.1  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   5.1  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    23   5.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   5.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   5.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   5.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   5.1  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   6.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   8.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   8.8  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 110 VVTTLGQFR*YVFVIYKKYYSIF 42
           +  TLG F   +FV+ + YY IF
Sbjct: 204 IYATLGSFYIPLFVMIQVYYKIF 226


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 292 TRAPLMLLCDMCDSIPKEYA 233
           T+APL  +C  C S+ +EYA
Sbjct: 107 TKAPLECMCRPCTSV-EEYA 125


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 345 AEITLGDNGTENRLTESLSLIDA 413
           AEI L +NG    +TE  ++ DA
Sbjct: 88  AEIFLDENGVNKLITECSAISDA 110


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 153 SNGNHNNNILSVVACSNY 100
           +N N+NNN    + C+NY
Sbjct: 87  NNYNYNNNNYKKLYCNNY 104


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 153 SNGNHNNNILSVVACSNY 100
           +N N+NNN    + C+NY
Sbjct: 87  NNYNYNNNNYKKLYCNNY 104


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 153 SNGNHNNNILSVVACSNY 100
           +N N+NNN    + C+NY
Sbjct: 87  NNYNYNNNNYKKLYCNNY 104


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 381 DFQFHYRLMLFPLQCIVILFV*YSI 307
           DF  +  L  F + CI+++F+ Y+I
Sbjct: 342 DFIIYSSLSSFYIPCIIMVFLYYNI 366


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
 Frame = -3

Query: 373 VPLSPNVISAAVYCNPFC-IIFNNAAGGTRAPLMLLCDMCDSIPKEYAEWWK 221
           VP+  N         P+   + NN      A    L D+     +E A+WWK
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQKELTDLGKLGEEEKADWWK 343


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
 Frame = -3

Query: 373 VPLSPNVISAAVYCNPFC-IIFNNAAGGTRAPLMLLCDMCDSIPKEYAEWWK 221
           VP+  N         P+   + NN      A    L D+     +E A+WWK
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQKELTDLGKLGEEEKADWWK 343


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
 Frame = -3

Query: 373 VPLSPNVISAAVYCNPFC-IIFNNAAGGTRAPLMLLCDMCDSIPKEYAEWWK 221
           VP+  N         P+   + NN      A    L D+     +E A+WWK
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQKELTDLGKLGEEEKADWWK 343


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 309 LNIIQKGLQYTAAEITLGDNGTENRLTESLSLID 410
           LN + KG+ Y    I +  N  +  L+   SLI+
Sbjct: 60  LNYVNKGVTYKHTIIEMDSNPIKTALSVCKSLIE 93


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 267  QSNINGALVPPAALLNIIQKGLQYTAAEITLGDNG 371
            Q    G  +P AAL++ ++   +YT   I  G  G
Sbjct: 955  QQEFTGPPLPYAALIDELKPATRYTIRVIAEGPAG 989


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 267  QSNINGALVPPAALLNIIQKGLQYTAAEITLGDNG 371
            Q    G  +P AAL++ ++   +YT   I  G  G
Sbjct: 951  QQEFTGPPLPYAALIDELKPATRYTIRVIAEGPAG 985


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,393
Number of Sequences: 438
Number of extensions: 5374
Number of successful extensions: 23
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)