Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_F23
         (940 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   1.3  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     25   1.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   5.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   5.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   5.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   9.2  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 390 HKKTEENEILSKGQEVSGNIFYMKQNISNACGTIAL 497
           H+K ++  I  +    + N FY K N SN+  +  L
Sbjct: 123 HQKLDQKFIFPQENNYNDNYFYSKSNGSNSSNSDVL 158


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 446 YFLYETKYQQCMWDYSSCT 502
           YF++E+     +WD+  CT
Sbjct: 104 YFVHESLKNVLLWDFQECT 122


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -3

Query: 839 FASHNSCKFCCIFQQSFL*SWXMIDXKSFTAI*LIQCSIFLDK 711
           FA  N      +F   F  +W   D    TA  L  C+I LD+
Sbjct: 81  FAGVNDLLGYWVFGPRFCDTWIAFDVMCSTASILNLCAISLDR 123


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = -3

Query: 299 DIYNIPFVWYAELLQKLVQDIGIGFKRXLKFRSPFQSLKLWS 174
           D  N+      +LL + V  +G G++  +K++    +L++WS
Sbjct: 370 DSVNVQLYGQLDLLVRKV--LGFGYESNVKYQVVPSALQMWS 409


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = -3

Query: 299 DIYNIPFVWYAELLQKLVQDIGIGFKRXLKFRSPFQSLKLWS 174
           D  N+      +LL + V  +G G++  +K++    +L++WS
Sbjct: 370 DSVNVQLYGQLDLLVRKV--LGFGYESNVKYQVVPSALQMWS 409


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 521 RIVGHTMYKSYSPTCIADIL 462
           R +G+ ++ +Y PTC+  I+
Sbjct: 242 RRLGYYLFHTYIPTCLIVIM 261


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,519
Number of Sequences: 438
Number of extensions: 4634
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30718506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)