BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_F22
(943 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA... 31 1.7
BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p pro... 31 3.0
AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA... 31 3.0
AE014298-2543|AAF48712.2| 237|Drosophila melanogaster CG12997-P... 30 4.0
X71975-1|CAA50795.1| 239|Drosophila melanogaster GCR 101 protein. 29 7.0
X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin pr... 29 7.0
BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p pro... 29 7.0
AY075501-1|AAO39496.1| 299|Drosophila melanogaster RE52135p pro... 29 7.0
AY052130-1|AAK93554.1| 455|Drosophila melanogaster SD08037p pro... 29 7.0
AE014297-3872|AAF56525.1| 454|Drosophila melanogaster CG5913-PA... 29 7.0
AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 29 7.0
AE013599-3129|AAF46672.1| 237|Drosophila melanogaster CG4038-PA... 29 7.0
U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade pro... 29 9.2
BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p pro... 29 9.2
AY052044-1|AAK93468.1| 581|Drosophila melanogaster LP06006p pro... 29 9.2
AE014298-1796|AAF48189.3| 1470|Drosophila melanogaster CG17762-P... 29 9.2
AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB... 29 9.2
>AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA
protein.
Length = 579
Score = 31.5 bits (68), Expect = 1.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 877 PXPPPXXXPXXPXPLXPPPP 936
P PPP P P P PPPP
Sbjct: 466 PPPPPPPPPPPPPPTEPPPP 485
Score = 30.7 bits (66), Expect = 3.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 877 PXPPPXXXPXXPXPLXPPPP 936
P PPP P P P PPPP
Sbjct: 471 PPPPPPPPPTEPPPPPPPPP 490
>BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p
protein.
Length = 592
Score = 30.7 bits (66), Expect = 3.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 877 PXPPPXXXPXXPXPLXPPPP 936
P PPP P P P PPPP
Sbjct: 150 PAPPPPPPPPPPPPPPPPPP 169
>AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA
protein.
Length = 594
Score = 30.7 bits (66), Expect = 3.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 877 PXPPPXXXPXXPXPLXPPPP 936
P PPP P P P PPPP
Sbjct: 152 PAPPPPPPPPPPPPPPPPPP 171
>AE014298-2543|AAF48712.2| 237|Drosophila melanogaster CG12997-PA
protein.
Length = 237
Score = 30.3 bits (65), Expect = 4.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 877 PXPPPXXXPXXPXPLXPPPP 936
P PPP P P PL PPP
Sbjct: 125 PEPPPLFQPLEPPPLFQPPP 144
>X71975-1|CAA50795.1| 239|Drosophila melanogaster GCR 101 protein.
Length = 239
Score = 29.5 bits (63), Expect = 7.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 935 GGGGXRGXGXXGXXXGGGXG 876
GGGG RG G G GGG G
Sbjct: 19 GGGGGRGFGGGGGGRGGGGG 38
>X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin
protein.
Length = 147
Score = 29.5 bits (63), Expect = 7.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 935 GGGGXRGXGXXGXXXGGGXG 876
GGGG RG G G GGG G
Sbjct: 25 GGGGFRGRGGGGGGGGGGFG 44
>BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p
protein.
Length = 331
Score = 29.5 bits (63), Expect = 7.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 935 GGGGXRGXGXXGXXXGGGXG 876
GGGG RG G G GGG G
Sbjct: 18 GGGGFRGRGGGGGGGGGGFG 37
>AY075501-1|AAO39496.1| 299|Drosophila melanogaster RE52135p
protein.
Length = 299
Score = 29.5 bits (63), Expect = 7.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 935 GGGGXRGXGXXGXXXGGGXG 876
GGGG RG G G GGG G
Sbjct: 21 GGGGGRGFGGGGGGRGGGGG 40
>AY052130-1|AAK93554.1| 455|Drosophila melanogaster SD08037p
protein.
Length = 455
Score = 29.5 bits (63), Expect = 7.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 935 GGGGXRGXGXXGXXXGGGXGXRYXXWQHP 849
GG G G G G GGG G WQ P
Sbjct: 347 GGRGGGGGGGFGGGRGGGGGGGGGNWQQP 375
>AE014297-3872|AAF56525.1| 454|Drosophila melanogaster CG5913-PA
protein.
Length = 454
Score = 29.5 bits (63), Expect = 7.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 935 GGGGXRGXGXXGXXXGGGXGXRYXXWQHP 849
GG G G G G GGG G WQ P
Sbjct: 347 GGRGGGGGGGFGGGRGGGGGGGGGNWQQP 375
>AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA
protein.
Length = 344
Score = 29.5 bits (63), Expect = 7.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 935 GGGGXRGXGXXGXXXGGGXG 876
GGGG RG G G GGG G
Sbjct: 18 GGGGFRGRGGGGGGGGGGFG 37
>AE013599-3129|AAF46672.1| 237|Drosophila melanogaster CG4038-PA
protein.
Length = 237
Score = 29.5 bits (63), Expect = 7.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 935 GGGGXRGXGXXGXXXGGGXG 876
GGGG RG G G GGG G
Sbjct: 21 GGGGGRGFGGGGGGRGGGGG 40
>U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade
protein.
Length = 1047
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 883 PPPXXXPXXPXPLXPPPP 936
PPP P P P PPPP
Sbjct: 619 PPPQMAPHHPNPYQPPPP 636
>BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p
protein.
Length = 1047
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 883 PPPXXXPXXPXPLXPPPP 936
PPP P P P PPPP
Sbjct: 619 PPPQMAPHHPNPYQPPPP 636
>AY052044-1|AAK93468.1| 581|Drosophila melanogaster LP06006p
protein.
Length = 581
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 883 PPPXXXPXXPXPLXPPPP 936
PPP P P P PPPP
Sbjct: 153 PPPQMAPHHPNPYQPPPP 170
>AE014298-1796|AAF48189.3| 1470|Drosophila melanogaster CG17762-PD,
isoform D protein.
Length = 1470
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Frame = -3
Query: 935 GGGGXRGXGXXGXXXGG----GXGXRYXXWQHPXWXXXPTP 825
GGGG G G G GG G G + +QHP P P
Sbjct: 827 GGGGAGGSGGGGGASGGGGASGAGAQQHQYQHPHPYPHPHP 867
>AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB
protein.
Length = 1047
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 883 PPPXXXPXXPXPLXPPPP 936
PPP P P P PPPP
Sbjct: 619 PPPQMAPHHPNPYQPPPP 636
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,495,714
Number of Sequences: 53049
Number of extensions: 464149
Number of successful extensions: 4324
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3706
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4669258284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -