Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_F21
(923 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19F8.08 |rps401|rps4-1, rps4, SPBC25H2.17c|40S ribosomal pro... 275 5e-75
SPAC959.07 |rps403|rps4-3, rps4|40S ribosomal protein S4|Schizos... 274 1e-74
SPBC21B10.10 |rps402|rps4-2|40S ribosomal protein S4|Schizosacch... 274 1e-74
SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 27 2.8
SPAC8C9.09c |mug129||sequence orphan|Schizosaccharomyces pombe|c... 27 3.7
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb... 27 4.9
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 27 4.9
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 4.9
SPAC977.16c |dak2||dihydroxyacetone kinase Dak2 |Schizosaccharom... 26 8.6
>SPBC19F8.08 |rps401|rps4-1, rps4, SPBC25H2.17c|40S ribosomal
protein S4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 262
Score = 275 bits (675), Expect = 5e-75
Identities = 128/199 (64%), Positives = 151/199 (75%)
Frame = +2
Query: 122 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 301
P H L+ P P P ++FLRNRLKYAL G EV I+ QRLIKVDG
Sbjct: 15 PHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDG 74
Query: 302 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 481
KVRTD T+P GFMDV+S+EKT E FRL+YD+KGRFT+HRIT EEAKYKLCKVKRV G K
Sbjct: 75 KVRTDSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAK 134
Query: 482 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 661
VP+LVTHDGRTIRYPDPLIKVND+I+L++ T KI FIKF++ M+TGGRN+GRVGT
Sbjct: 135 GVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGT 194
Query: 662 IVXRERHPGSFDIVHIKDS 718
IV RE H GSF+I+H+KD+
Sbjct: 195 IVHREHHLGSFEIIHVKDA 213
Score = 81.0 bits (191), Expect = 2e-16
Identities = 34/47 (72%), Positives = 37/47 (78%)
Frame = +1
Query: 79 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 219
M RGPKKHLKR+ AP W+LDKL G YAP+PS GPHK RECLPL F
Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVF 47
>SPAC959.07 |rps403|rps4-3, rps4|40S ribosomal protein
S4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 262
Score = 274 bits (672), Expect = 1e-74
Identities = 127/199 (63%), Positives = 151/199 (75%)
Frame = +2
Query: 122 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 301
P H L+ P P P ++FLRNRLKYAL G EV I+ QRLIKVDG
Sbjct: 15 PHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDG 74
Query: 302 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 481
KVRTD T+P GFMDV+S++KT E FRL+YD+KGRFT+HRIT EEAKYKLCKVKRV G K
Sbjct: 75 KVRTDSTFPTGFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAK 134
Query: 482 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 661
VP+LVTHDGRTIRYPDPLIKVND+I+L++ T KI FIKF++ M+TGGRN+GRVGT
Sbjct: 135 GVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGT 194
Query: 662 IVXRERHPGSFDIVHIKDS 718
IV RE H GSF+I+H+KD+
Sbjct: 195 IVHREHHLGSFEIIHVKDA 213
Score = 81.0 bits (191), Expect = 2e-16
Identities = 34/47 (72%), Positives = 37/47 (78%)
Frame = +1
Query: 79 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 219
M RGPKKHLKR+ AP W+LDKL G YAP+PS GPHK RECLPL F
Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVF 47
>SPBC21B10.10 |rps402|rps4-2|40S ribosomal protein
S4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 262
Score = 274 bits (671), Expect = 1e-74
Identities = 127/199 (63%), Positives = 151/199 (75%)
Frame = +2
Query: 122 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 301
P H L+ P P P ++FLRNRLKYAL G EV I+ QRLI+VDG
Sbjct: 15 PHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIQVDG 74
Query: 302 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 481
KVRTD T+P GFMDV+S+EKT E FRL+YD+KGRFT+HRIT EEAKYKLCKVKRV G K
Sbjct: 75 KVRTDSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAK 134
Query: 482 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 661
VP+LVTHDGRTIRYPDPLIKVND+I+L++ T KI FIKF++ M+TGGRN+GRVGT
Sbjct: 135 GVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGT 194
Query: 662 IVXRERHPGSFDIVHIKDS 718
IV RE H GSF+I+H+KD+
Sbjct: 195 IVHREHHLGSFEIIHVKDA 213
Score = 81.0 bits (191), Expect = 2e-16
Identities = 34/47 (72%), Positives = 37/47 (78%)
Frame = +1
Query: 79 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 219
M RGPKKHLKR+ AP W+LDKL G YAP+PS GPHK RECLPL F
Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVF 47
>SPBC18H10.10c |cwc16||complexed with Cdc5 protein
Cwf16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +2
Query: 275 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 454
K++ K+ +R + +P + +I + F + G + +I K LC
Sbjct: 13 KRKFDKLRNVIRFEMPFPVWCNNCENIIQQGTRFNAVKKEIGSYYTTKIWSFSLKCHLCS 72
Query: 455 VK-RVATGPKNVPYLVTHDGR 514
V T PKN Y+V GR
Sbjct: 73 NPIDVHTDPKNTEYIVASGGR 93
>SPAC8C9.09c |mug129||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 302
Score = 27.1 bits (57), Expect = 3.7
Identities = 27/98 (27%), Positives = 48/98 (48%)
Frame = -2
Query: 388 ID*TKQFISLLN*DNIHKSSRISRVSPNFPINLYEALFHNFQDFVSGQSILQTIPQENQP 209
ID +QF+ L+ S+ R + + IN Y LFH+ + G+S+ +T +E
Sbjct: 55 IDSLRQFVQQLSVRQ--NMSKDRREALTYFINSYNDLFHDVY-YGDGRSMSKT--EE--- 106
Query: 208 GASTRATCGDRLTVSVHTHRQVCPTSMLWERLSASNAS 95
A T T T+ + ++ P+ + W+RLS + A+
Sbjct: 107 -AQTIVT----FTIGSYLYKYTHPSELFWQRLSDNMAN 139
>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1428
Score = 26.6 bits (56), Expect = 4.9
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 541 QSQRFHPVRHCNYED 585
++++ HPVRH YED
Sbjct: 5 ENEKIHPVRHSKYED 19
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 599 KFESGNLCMITGGRNLGRVGTIVXRERHPGSFDIV 703
KFE LC + G L R+G + E GS D+V
Sbjct: 318 KFELRRLCRVVGATPLARMGVPMPEEM--GSVDVV 350
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 341 DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYL-VTHDGRT 517
+V S+EK N++F + Y+V + + + K+ ++ ++ KNVP + V H
Sbjct: 1718 NVSSLEKCNQIFSIFYEVFFQHPSTNVYANDEGIKIGALQIISFFLKNVPEITVQHQTEM 1777
Query: 518 IR 523
++
Sbjct: 1778 LK 1779
>SPAC977.16c |dak2||dihydroxyacetone kinase Dak2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 25.8 bits (54), Expect = 8.6
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -2
Query: 712 LDVHNVEGAGMSLAXHDGAHTPQVTASRDHTQVPGLKLD 596
LD+H V S+ D A T + AS DH VPG K +
Sbjct: 174 LDLHQVAQVAQSVI--DNAAT--IAASLDHCAVPGRKFE 208
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,151,965
Number of Sequences: 5004
Number of extensions: 68155
Number of successful extensions: 186
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 467341524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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