Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_F20
         (1018 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
 Frame = -2

Query: 960 PPPPXXXFFP-PPXFFXX---IXXPPXXKKNPXFSQXKXXFPPPPXKXPPXXXHPP 805
           PPPP       PP F      +   P    NP   +    FP  P   PP    PP
Sbjct: 533 PPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPP 588



 Score = 23.8 bits (49), Expect = 8.4
 Identities = 21/70 (30%), Positives = 21/70 (30%), Gaps = 5/70 (7%)
 Frame = -3

Query: 1016 PPPQK*XXXTXXXPPPFFFPPP---XXXXFFP--PXXFXFXXKXXXXXXKTPFFHKXXXF 852
            PPP           PP F PPP       FFP  P    F           P        
Sbjct: 530  PPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQP-----PPA 584

Query: 851  FPPPPXXNPP 822
             PPPP   PP
Sbjct: 585  PPPPPPMGPP 594


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,635
Number of Sequences: 2352
Number of extensions: 10122
Number of successful extensions: 34
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 112230027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)