Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_F20
(1018 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 40 0.003
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 40 0.003
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 36 0.035
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 36 0.046
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 36 0.061
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 35 0.081
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 35 0.081
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.11
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.11
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.11
AF067209-1|AAC16982.2| 553|Caenorhabditis elegans Warthog (hedg... 34 0.14
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.19
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 33 0.33
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.43
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.43
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.43
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.43
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 32 0.75
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 32 0.75
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.75
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.99
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.99
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 31 0.99
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 31 0.99
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 1.3
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 1.3
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.7
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 31 1.7
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 4.0
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 4.0
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 4.0
U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical pr... 29 5.3
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 29 5.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.3
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 7.0
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 7.0
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 29 7.0
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 29 7.0
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 29 7.0
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 29 7.0
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 28 9.3
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = -2
Query: 978 PPXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNP---XFSQXKXXFPPPPXKXPPXXXHP 808
PP FFPPPP F PPP F PP P + PPP +P
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYP 350
Query: 807 P 805
P
Sbjct: 351 P 351
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = -2
Query: 978 PPXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNP---XFSQXKXXFPPPPXKXPPXXXHP 808
PP FFPPPP F PPP F PP P + PPP +P
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYP 350
Query: 807 P 805
P
Sbjct: 351 P 351
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 36.3 bits (80), Expect = 0.035
Identities = 20/58 (34%), Positives = 23/58 (39%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXGG 979
G W GG GGGG+ + G WGG GG GGGG + GG
Sbjct: 86 GDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNN---GGGGGGRGGGG 140
Score = 32.3 bits (70), Expect = 0.57
Identities = 24/73 (32%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = +2
Query: 806 GGWXXXGGXFXG-GGGKXXFXCE-KXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXGG 979
GGW GG G GGG+ G WGG GG GGGG+ GG
Sbjct: 47 GGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGG 106
Query: 980 XXLXXXFIFVGGG 1018
+ GGG
Sbjct: 107 NNNGGGGNWGGGG 119
Score = 29.9 bits (64), Expect = 3.0
Identities = 26/84 (30%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 GGXWGGXNFXPPPXXGYPREXXRIFWGX-GGXKKXPPXXGWLNGKIXGGXXAXXXGKGGP 182
GG WGG N G R WG GG + G G GG G
Sbjct: 65 GGDWGGNNGGGGNWGG--NGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNND 122
Query: 183 XXKXKXXGGGGG*XXGGLSXREGR 254
GGGGG GG +GR
Sbjct: 123 GGWGGNNGGGGGGRGGGGRGGDGR 146
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGG 958
GG GG GG G+ G WGG + GGG+ GGG
Sbjct: 131 GGGGGRGGGGRGGDGRGPPGSNGGG---DWGGNGGGGRGGGGGRGGGGGGG 178
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 35.9 bits (79), Expect = 0.046
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = -2
Query: 960 PPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXFPPPPXKXPPXXXHPP 805
PPPP PPP + PP P F PPPP PP PP
Sbjct: 31 PPPPPPMCAPPP-----LPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPP 77
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.061
Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Frame = -2
Query: 975 PXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKN---PXFS-QXKXXFPPPPXKXPPXXXHP 808
P F PPP FFP P PP +N P F PPPP + PP P
Sbjct: 18 PDFFERPPPPDWFFPGP--LRPWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRP 75
Query: 807 P 805
P
Sbjct: 76 P 76
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 35.1 bits (77), Expect = 0.081
Identities = 22/83 (26%), Positives = 27/83 (32%)
Frame = -1
Query: 253 RPSLXDXPPXF*PPPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQNI 74
R + + PP P P P F F PP P + PP + P P
Sbjct: 102 RSRMDNGPPMPTPMPFPQHFPFPGMPPMP---SGPPPPSMAYGMPPMPSGMMPPRGMPGA 158
Query: 73 LXXSRGYPXFGGGXKFXPPXXPP 5
RGYP + PP P
Sbjct: 159 YPPPRGYPPAPAPGVYMPPPGMP 181
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 35.1 bits (77), Expect = 0.081
Identities = 22/83 (26%), Positives = 27/83 (32%)
Frame = -1
Query: 253 RPSLXDXPPXF*PPPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQNI 74
R + + PP P P P F F PP P + PP + P P
Sbjct: 102 RSRMDNGPPMPTPMPFPQHFPFPGMPPMP---SGPPPPSMAYGMPPMPSGMMPPRGMPGA 158
Query: 73 LXXSRGYPXFGGGXKFXPPXXPP 5
RGYP + PP P
Sbjct: 159 YPPPRGYPPAPAPGVYMPPPGMP 181
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.11
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Frame = -2
Query: 1017 PPPTK----IKXXXXXXPPXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXF 850
PPP K + PP PPP PPP PP P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 849 PPPPXKXPPXXXHPP 805
PPPP PP PP
Sbjct: 300 PPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.7 bits (76), Expect = 0.11
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Frame = -2
Query: 1017 PPPTK----IKXXXXXXPPXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXF 850
PPP K + PP PPP PPP PP P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 849 PPPPXKXPPXXXHPP 805
PPPP PP PP
Sbjct: 321 PPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.7 bits (76), Expect = 0.11
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Frame = -2
Query: 1017 PPPTK----IKXXXXXXPPXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXF 850
PPP K + PP PPP PPP PP P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 849 PPPPXKXPPXXXHPP 805
PPPP PP PP
Sbjct: 306 PPPPRGSPPTGSLPP 320
>AF067209-1|AAC16982.2| 553|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 9 protein.
Length = 553
Score = 34.3 bits (75), Expect = 0.14
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -1
Query: 217 PPPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQ 80
P PPP F F PPFP P +F F P F P PQ
Sbjct: 347 PTPPPNPFVFAPLPPFP-QFGLPQPNLFQFPAPPAPPPFGVPQAPQ 391
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 33.9 bits (74), Expect = 0.19
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 4/74 (5%)
Frame = -2
Query: 1014 PPTKIKXXXXXXP-PXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKN---PXFSQXKXXFP 847
PP+ I P P F PPP F PPP I PP P P
Sbjct: 47 PPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP 106
Query: 846 PPPXKXPPXXXHPP 805
PPP P PP
Sbjct: 107 PPPMFGAPPPPPPP 120
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 33.1 bits (72), Expect = 0.33
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -1
Query: 232 PPXF*PPPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQNILXXS 62
PP F P PP F P P PP P P G PP P IL S
Sbjct: 116 PPCFGPACPPPCFGPACAPSAPIIVNGPPPCFGPACPPPCFGPACAPPPPAPILFGS 172
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/79 (30%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Frame = -1
Query: 232 PPXF*PPPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQNILXXSRGY 53
PP F P PP F PP P PP P P G P P + +
Sbjct: 88 PPCFGPACPPPCFGPACAPPAPIIVNGPPPCFGPACPPPCFGPACAPSAP---IIVNGPP 144
Query: 52 PXFGGGXK---FXPPXXPP 5
P FG F P PP
Sbjct: 145 PCFGPACPPPCFGPACAPP 163
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -1
Query: 232 PPXF*PPPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNP 83
PP F P PP F P P PP P P G PP P
Sbjct: 60 PPCFGPACPPPCFGPACVPLAPIIVNGPPPCFGPACPPPCFGPACAPPAP 109
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.43
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = -2
Query: 1017 PPPTKIKXXXXXXPPXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXFPPPP 838
PP T PP PPPP PP PP P S PPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP-ITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Query: 837 XKXPPXXXHPP 805
PP PP
Sbjct: 766 GGCPPPPPPPP 776
Score = 31.9 bits (69), Expect = 0.75
Identities = 25/78 (32%), Positives = 25/78 (32%), Gaps = 7/78 (8%)
Frame = -1
Query: 217 PPPPPXXFXFXXGPP-------FPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQNILXXSR 59
PPPPP GPP P PP P P G PP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 58 GYPXFGGGXKFXPPXXPP 5
P GG K PP PP
Sbjct: 773 PPPP-PGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.43
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = -2
Query: 1017 PPPTKIKXXXXXXPPXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXFPPPP 838
PP T PP PPPP PP PP P S PPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP-ITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Query: 837 XKXPPXXXHPP 805
PP PP
Sbjct: 766 GGCPPPPPPPP 776
Score = 31.9 bits (69), Expect = 0.75
Identities = 25/78 (32%), Positives = 25/78 (32%), Gaps = 7/78 (8%)
Frame = -1
Query: 217 PPPPPXXFXFXXGPP-------FPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQNILXXSR 59
PPPPP GPP P PP P P G PP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 58 GYPXFGGGXKFXPPXXPP 5
P GG K PP PP
Sbjct: 773 PPPP-PGGFKGGPPPPPP 789
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.43
Identities = 24/75 (32%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Frame = -2
Query: 1017 PPPTKIKXXXXXXPPXXFFPP---PPXXXF-FPPPXFFXXIXXPPXXKKNPXFSQXKXXF 850
PPP PP PP PP F PPP F P S F
Sbjct: 321 PPPQGAPQQGFGAPPQG--PPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNF 378
Query: 849 PPPPXKXPPXXXHPP 805
PPP PP PP
Sbjct: 379 APPPQSGPPGAFAPP 393
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.43
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = -2
Query: 1017 PPPTKIKXXXXXXPPXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXFPPPP 838
PP T PP PPPP PP PP P S PPPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP-ITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Query: 837 XKXPPXXXHPP 805
PP PP
Sbjct: 349 GGCPPPPPPPP 359
Score = 31.9 bits (69), Expect = 0.75
Identities = 25/78 (32%), Positives = 25/78 (32%), Gaps = 7/78 (8%)
Frame = -1
Query: 217 PPPPPXXFXFXXGPP-------FPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQNILXXSR 59
PPPPP GPP P PP P P G PP P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 58 GYPXFGGGXKFXPPXXPP 5
P GG K PP PP
Sbjct: 356 PPPP-PGGFKGGPPPPPP 372
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 31.9 bits (69), Expect = 0.75
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = -2
Query: 933 PPPXFFXXIXXPPXXKKNPXFSQXKXXFPPPPXKXPPXXXHPPXK 799
PPP FF I PP +P FS PPPP P + P K
Sbjct: 727 PPPQFFPMIGGPPL--MHPTFSTSAP--PPPPPPQPMEYGYNPMK 767
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.9 bits (69), Expect = 0.75
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXGG 979
GGW G GGGG+ G WGG + G G + G GG + GG
Sbjct: 146 GGWGGSQGGQNGGGGRGG-----SGGQGGWGGSQDGGSQGGWGGQNGGGQGGNQGGGG 198
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.75
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = +2
Query: 809 GWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXGG 979
GW GG GGG+ G WGG GG GGGG+ GG
Sbjct: 54 GWGRGGGGSGWGGGRGGGWGNNGGGG-NWGGNGGGGNGGGGRGGGGGGGGGRGGGGG 109
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/58 (34%), Positives = 22/58 (37%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXGG 979
G W GG GGGG+ G GG GGG GGGG + GG
Sbjct: 79 GNWGGNGGGGNGGGGRGGGGGGGGGR----GGGGGGRGGGGGGGGGRGGGGGGRGGGG 132
Score = 28.7 bits (61), Expect = 7.0
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Frame = +3
Query: 81 WGX--GGXKKXPPXXGWLNGKIXGGXXAXXXGKGGPXXKXKXXGGGGG*XXGGLSXREGR 254
WG GG G G GG G+GG GGGGG GG R G
Sbjct: 72 WGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGG- 130
Query: 255 *LXGRG 272
GRG
Sbjct: 131 --GGRG 134
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.99
Identities = 23/75 (30%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Frame = -2
Query: 1017 PPPTKIKXXXXXXPPXXFF----PPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXF 850
PPP + PP PPPP +PPP PP + P
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPP-------PPPPPGRTPG-PPGMPGM 316
Query: 849 PPPPXKXPPXXXHPP 805
PPPP PP PP
Sbjct: 317 PPPP---PPSRFGPP 328
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/74 (29%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Frame = -2
Query: 1017 PPPTKIKXXXXXXPPXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXFPPPP 838
PPP P PPPP F PP PP + P PPPP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP-----PPPP 352
Query: 837 XKXP---PXXXHPP 805
+ P P PP
Sbjct: 353 PRYPSAGPGMYPPP 366
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = -2
Query: 1017 PPPTKIKXXXXXXPPXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXFPPPP 838
PPP+ PP P PP PPP PP + P PPP
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP--------PPPSRFGPPGMGGMPPPPPPG 340
Query: 837 XKXPPXXXHPP 805
+ P PP
Sbjct: 341 MRYPGGMPPPP 351
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/71 (29%), Positives = 25/71 (35%)
Frame = -1
Query: 217 PPPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQNILXXSRGYPXFGG 38
PPPPP + PP P PP + P P F PP + + G
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGM-PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 345
Query: 37 GXKFXPPXXPP 5
G PP PP
Sbjct: 346 G---MPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.99
Identities = 23/75 (30%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Frame = -2
Query: 1017 PPPTKIKXXXXXXPPXXFF----PPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXF 850
PPP + PP PPPP +PPP PP + P
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPP-------PPPPPGRTPG-PPGMPGM 326
Query: 849 PPPPXKXPPXXXHPP 805
PPPP PP PP
Sbjct: 327 PPPP---PPSRFGPP 338
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/74 (29%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Frame = -2
Query: 1017 PPPTKIKXXXXXXPPXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXFPPPP 838
PPP P PPPP F PP PP + P PPPP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP-----PPPP 362
Query: 837 XKXP---PXXXHPP 805
+ P P PP
Sbjct: 363 PRYPSAGPGMYPPP 376
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = -2
Query: 1017 PPPTKIKXXXXXXPPXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXFPPPP 838
PPP+ PP P PP PPP PP + P PPP
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP--------PPPSRFGPPGMGGMPPPPPPG 350
Query: 837 XKXPPXXXHPP 805
+ P PP
Sbjct: 351 MRYPGGMPPPP 361
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/71 (29%), Positives = 25/71 (35%)
Frame = -1
Query: 217 PPPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQNILXXSRGYPXFGG 38
PPPPP + PP P PP + P P F PP + + G
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGM-PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 355
Query: 37 GXKFXPPXXPP 5
G PP PP
Sbjct: 356 G---MPPPPPP 363
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.5 bits (68), Expect = 0.99
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKK 967
GG+ GG GGGG+ ++ G+ GG GGG GGGG++
Sbjct: 225 GGYGSGGGWGGGGGGRDR---DRGGWGGGGGGRGYGGGGGGGGYGYGGGGGGRR 275
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 81 WGXGGXKKXPPXXGWLNGKIXGGXXAXXXGKGGPXXKXKXXGGGGG 218
WG GG + GW GG G GG GGGGG
Sbjct: 233 WGGGGGGRDRDRGGW-----GGGGGGRGYGGGGGGGGYGYGGGGGG 273
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 824 GGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGG 961
GG GGGG + C++ G F GGG++ GGGG
Sbjct: 26 GGRRGGGGGSTCYNCQETGHF----SRDCPKGGSGGGQRGGGGGGG 67
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = -1
Query: 217 PPPPPXXFXFXXGPPFPXXXAXXPPXIFP---FNXPXXGGXFFXPPNPQNILXXSRGYP 50
PPPPP + GPP P PP +P P + PP PQ GYP
Sbjct: 680 PPPPPQGQQYYGGPP-PPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQ--QRGYGYP 735
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = -1
Query: 217 PPPPPXXFXFXXGPPFPXXXAXXPPXIFP---FNXPXXGGXFFXPPNPQNILXXSRGYP 50
PPPPP + GPP P PP +P P + PP PQ GYP
Sbjct: 680 PPPPPQGQQYYGGPP-PPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQ--QRGYGYP 735
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 84 GXGGXKKXPPXXGWLNGKIXGGXXAXXXGKGGPXXKXKXXGGGGG*XXGG 233
G GG PP G GG G GG GGGGG GG
Sbjct: 47 GCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGG 96
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 84 GXGGXKKXPPXXGWLNGKIXGGXXAXXXGKGGPXXKXKXXGGGGG*XXGG 233
G GG PP G GG G GG GGGGG GG
Sbjct: 104 GCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGG 153
Score = 28.3 bits (60), Expect = 9.3
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXGG 979
GG GG GGGG G GG GGG GGGG GG
Sbjct: 124 GGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 181
Score = 28.3 bits (60), Expect = 9.3
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXGG 979
GG GG GGGG G GG GGG GGGG GG
Sbjct: 131 GGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGG 188
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/61 (36%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = -2
Query: 1017 PPPTKIKXXXXXXPPXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQ-XKXXFPPP 841
PPP I PP PPPP PP F PP P F Q PPP
Sbjct: 707 PPPPGIPGYPPAPPPPGVGPPPPQGI---PPMGFDPNKPPP-----PMFQQGFNAGAPPP 758
Query: 840 P 838
P
Sbjct: 759 P 759
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 217 PPPPPXXFXFXXGPPFP-XXXAXXPPXIFPFNXP 119
PPPP + F PP P + PP + PF P
Sbjct: 324 PPPPSAGYFFQAPPPAPASSSSTVPPAVSPFGVP 357
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXGG 979
GG GG + GG G+ + G WGG ++ GGG GGGG+ GG
Sbjct: 247 GGQGGYGGDYGGGWGQ-----QGGGGQGGWGGPQ---QQQGGGGWGQQGGGGQGGWGG 296
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXGG 979
GG GG + GG G+ + G WGG ++ GGG GGGG+ GG
Sbjct: 209 GGQGGYGGDYGGGWGQ-----QGGGGQGGWGGPQ---QQQGGGGWGQQGGGGQGGWGG 258
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXGG 979
GG GG + GG G+ + G WGG ++ GGG GGGG+ GG
Sbjct: 247 GGQGGYGGDYGGGWGQ-----QGGGGQGGWGGPQ---QQQGGGGWGQQGGGGQGGWGG 296
>U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical
protein B0222.1 protein.
Length = 285
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = -1
Query: 217 PPPPPXXFXFXXGPP--FPXXXAXXPPXIFPFNXPXXG 110
PPPPP F GPP P A P F N P G
Sbjct: 234 PPPPPGFQGFQQGPPPSAPVYSAPPPYNNFQQNSPYGG 271
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/67 (25%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Frame = -2
Query: 1017 PPPTKIKXXXXXXP---PXXFFPPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXFP 847
PPP + P P ++ P P PP PP + + + P
Sbjct: 145 PPPPSMSNGAPYYPHMNPSPYYQPRPNYVTQPPAPIIPP-PQPPVMTASAAAAAYRDRLP 203
Query: 846 PPPXKXP 826
PPP K P
Sbjct: 204 PPPPKPP 210
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -2
Query: 960 PPPPXXXFFPPPXFFXXIXXPPXXKKNPXFSQXKXXFPPPPXKXPPXXXHPP 805
PPPP I PP P Q PPPP PP PP
Sbjct: 543 PPPPIAGLLAANGTNVPIPPPPP----PPLPQNLSGAPPPPPPPPPMLGGPP 590
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 28.7 bits (61), Expect = 7.0
Identities = 21/58 (36%), Positives = 23/58 (39%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXGG 979
GG GG F GGGG G +GG GGG + GGGG GG
Sbjct: 171 GGGSSGGGRFGGGGGDRFNDRGSRGGD-RYGGDRRGGGGGGGGDRY--GGGGGDRYGG 225
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/65 (26%), Positives = 21/65 (32%)
Frame = +2
Query: 824 GGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXGGXXLXXXFI 1003
GG GG F G GGG GGG K GG + +
Sbjct: 290 GGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGGGAKSGGGGGGIPGQSV 349
Query: 1004 FVGGG 1018
++G G
Sbjct: 350 YMGAG 354
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGG-GGKKXXGG 979
G + + GGGG+ + G +GG GGG + GG GG + GG
Sbjct: 662 GQFAPTSSAYGGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGG 720
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGG-GGKKXXGG 979
G + + GGGG+ + G +GG GGG + GG GG + GG
Sbjct: 703 GQFAPTSSAYGGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGG 761
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/65 (26%), Positives = 21/65 (32%)
Frame = +2
Query: 824 GGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXGGXXLXXXFI 1003
GG GG F G GGG GGG K GG + +
Sbjct: 184 GGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGGGAKSGGGGGGIPGQSV 243
Query: 1004 FVGGG 1018
++G G
Sbjct: 244 YMGAG 248
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGG-GGKKXXGG 979
G + + GGGG+ + G +GG GGG + GG GG + GG
Sbjct: 662 GQFAPTSSAYGGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGG 720
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +2
Query: 806 GGWXXXGGXFXGGGGKXXFXCEKXGFFFXWGGXXXKXKKXGGGKKXXXGGGGKKXXG 976
GGW GG G GG + G WGG + GGG+ GGG++ G
Sbjct: 56 GGWGGRGG--WGRGGGRGYGGRGGG----WGGRGGGWGRGGGGRGFY--GGGRRGWG 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,322,688
Number of Sequences: 27780
Number of extensions: 325401
Number of successful extensions: 1703
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2678332928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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