Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_F20
         (1018 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   7.7  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    22   7.7  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    22   7.7  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    22   7.7  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   7.7  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   7.7  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   7.7  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    22   7.7  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 238 DXPPXF*PPPPP 203
           D PP   PPPPP
Sbjct: 336 DTPPKPAPPPPP 347


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 13/45 (28%), Positives = 14/45 (31%)
 Frame = -1

Query: 214 PPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQ 80
           PP P           P      PP  FP   P     F  P NP+
Sbjct: 130 PPRPMGPWISIQEQIPRFRYIGPPTPFPRFIPPNAYRFRPPQNPR 174


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 13/45 (28%), Positives = 14/45 (31%)
 Frame = -1

Query: 214 PPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQ 80
           PP P           P      PP  FP   P     F  P NP+
Sbjct: 130 PPRPMGPWISIQEQIPRFRYIGPPTPFPRFIPPNAYRFRPPQNPR 174


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 13/45 (28%), Positives = 14/45 (31%)
 Frame = -1

Query: 214 PPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQ 80
           PP P           P      PP  FP   P     F  P NP+
Sbjct: 129 PPRPMGPWISMQEQIPRFRYIGPPTPFPRFIPPNAYRFHPPLNPR 173


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 13/45 (28%), Positives = 14/45 (31%)
 Frame = -1

Query: 214 PPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQ 80
           PP P           P      PP  FP   P     F  P NP+
Sbjct: 134 PPRPMGPWISMQEQIPRFRYIGPPTPFPRFIPPNAYRFHPPLNPR 178


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 13/45 (28%), Positives = 14/45 (31%)
 Frame = -1

Query: 214 PPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQ 80
           PP P           P      PP  FP   P     F  P NP+
Sbjct: 134 PPRPMGPWISMQEQIPRFRYIGPPTPFPRFIPPNAYRFHPPLNPR 178


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 13/45 (28%), Positives = 14/45 (31%)
 Frame = -1

Query: 214 PPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQ 80
           PP P           P      PP  FP   P     F  P NP+
Sbjct: 134 PPRPMGPWISMQEQIPRFRYIGPPTPFPRFIPPNAYRFHPPLNPR 178


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 13/45 (28%), Positives = 14/45 (31%)
 Frame = -1

Query: 214 PPPPXXFXFXXGPPFPXXXAXXPPXIFPFNXPXXGGXFFXPPNPQ 80
           PP P           P      PP  FP   P     F  P NP+
Sbjct: 368 PPRPMGPWISIQEQIPRFRYIGPPTPFPRFIPPNAYRFRPPQNPR 412


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,092
Number of Sequences: 438
Number of extensions: 6853
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33862920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)