Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_F19
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical ... 148 5e-36
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 55 6e-08
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 48 9e-06
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 46 4e-05
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 45 8e-05
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 42 8e-04
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 40 0.002
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 40 0.002
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 40 0.003
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 37 0.022
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 36 0.029
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 36 0.050
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 36 0.050
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 36 0.050
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 36 0.050
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 36 0.050
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 35 0.067
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 34 0.12
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 33 0.36
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 32 0.62
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 31 0.82
Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical pr... 31 1.4
U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical pr... 31 1.4
U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absent... 30 1.9
AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical ... 30 1.9
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical pr... 29 3.3
U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical pr... 28 7.7
>AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical
protein Y71F9AL.10 protein.
Length = 189
Score = 148 bits (359), Expect = 5e-36
Identities = 62/103 (60%), Positives = 74/103 (71%)
Frame = +1
Query: 199 GTTNSHNGERNYARKEIGIKCPVCSKFVLPDDIECHLVMCLTRPRLSYNEDVLSDSKGEC 378
G + H+ R+ + +KCPVC K V DD + HLVMCLTRP+++YN+DVL D KGEC
Sbjct: 86 GRLHGHHSRRSVPVFMMDMKCPVCHKVVPSDDADIHLVMCLTRPKITYNDDVLKDDKGEC 145
Query: 379 VICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCPEHPGD 507
ICLE+L AG IARLPCLCIYHK CID WF+ CPEHPGD
Sbjct: 146 SICLEDLEAGHKIARLPCLCIYHKQCIDDWFKRKNCCPEHPGD 188
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 55.2 bits (127), Expect = 6e-08
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 319 LTR-PRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
LTR P ++ + + + +C +CL+ D I LPC IYHK CID W +R+CP
Sbjct: 207 LTRIPTMTITPGMTQELQSDCAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCP 265
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 53.6 bits (123), Expect = 2e-07
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +1
Query: 358 SDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
S +G C IC E+L D I+ + C IYH GCI QW R CP
Sbjct: 7 SSLQGSCSICFEDLKQNDKISAIVCGHIYHHGCISQWIATKRQCP 51
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 48.0 bits (109), Expect = 9e-06
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 355 LSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWF-EVNRSCP 492
L D C ICLE ++G+ + LPC ++H CID W + + CP
Sbjct: 240 LGDDPDTCAICLESFASGEKLRHLPCRHVFHCNCIDVWLTQTRKICP 286
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 373 ECVICLEELSAG-DTIARLPCLCIYHKGCIDQWFEVNRSCP 492
EC++CLE++ +T+ L C YH GC +WF+V R CP
Sbjct: 518 ECLVCLEDMKEEHETLKCLDCKRKYHTGCAQKWFKVKRICP 558
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 46.0 bits (104), Expect = 4e-05
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 361 DSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
+ + C +CL G++I +L C ++H CI +W ++N+ CP
Sbjct: 428 EDEDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCP 471
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 46.0 bits (104), Expect = 4e-05
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 376 CVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
C+IC EE++ + RLPC ++H C+ WF+ ++CP
Sbjct: 292 CIICREEMTVDASPKRLPCSHVFHAHCLRSWFQRQQTCP 330
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 46.0 bits (104), Expect = 4e-05
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 364 SKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
+ EC IC+ + G+ I LPC+ +H+ C+D+W + +CP
Sbjct: 91 TSNECAICMIDFEPGERIRFLPCMHSFHQECVDEWLMKSFTCP 133
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 328 PRLSYNEDVLSDSKG--ECVICLEELSAG-DTIARLPCLCIYHKGCIDQWFEVNRSCP 492
P L E + SD EC++CLE++ DT+ C YH C+ +WF++ R CP
Sbjct: 882 PLLKLPETIKSDELDDKECLVCLEDMVKNQDTVKCSTCKRQYHTTCVQKWFKIKRICP 939
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 337 SYNEDVLSDSKGECVICLEEL-SAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
S D L D EC++CLE++ +T+ C YH GC +WF+V R CP
Sbjct: 880 SQKSDDLEDK--ECLVCLEDMMEEHETLKCSNCKRQYHTGCAQKWFKVKRICP 930
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 41.5 bits (93), Expect = 8e-04
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 361 DSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
D+ +C C + + + L C I+H+ CI+ W + SCP
Sbjct: 233 DNGAQCTTCFDTFKLDEDVGALDCNHIFHRPCIEPWLKTKNSCP 276
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 376 CVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
CVICLEE G + L C +H C+D W R CP
Sbjct: 317 CVICLEEYEEGTELRVLFCGHEFHPKCVDPWLLSKRRCP 355
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 346 EDVLSDSKGECVICLEELS-AGDTIARLPCLCIYHKGCIDQWFEVNRSCPE 495
E+V+ + G C+IC E + A +T+ C YH CI +W ++N CP+
Sbjct: 2098 EEVVEEEDG-CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQ 2147
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 346 EDVLSDSKGECVICLEELS-AGDTIARLPCLCIYHKGCIDQWFEVNRSCPE 495
E+V+ + G C+IC E + A +T+ C YH CI +W ++N CP+
Sbjct: 2098 EEVVEEEDG-CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQ 2147
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 343 NEDVLSDSKGECVICLEELSAGDTIARLP-CLCIYHKGCIDQWFEVNRSCPE 495
+ + + + EC+IC E++ + + P C IYH C QW +CP+
Sbjct: 517 SSNATEEFESECIICREDIDLENGTVQCPRCTEIYHSHCATQWLSQKPTCPK 568
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +1
Query: 328 PRLSYNEDVLSDSK----GECVICLEE-LSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
P +S++ + S S C+ICL++ +S TI C +H C QWF+ CP
Sbjct: 118 PSVSFSSSISSSSAELSDARCLICLDDVISTEKTIKCNSCRRRFHLDCASQWFKEKSVCP 177
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 373 ECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
EC ICLEE+ + C +H C +W R CP
Sbjct: 441 ECAICLEEMYNFKETIKCECRRRFHSKCATKWLNEKRECP 480
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.050
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 337 SYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
SY ++ CV+C E L T RLPC +H C+ W + SCP
Sbjct: 322 SYPSVKCANGDDRCVVCWELLG---TSRRLPCSHQFHDWCLMWWLAQDSSCP 370
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.050
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 337 SYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
SY ++ CV+C E L T RLPC +H C+ W + SCP
Sbjct: 322 SYPSVKCANGDDRCVVCWELLG---TSRRLPCSHQFHDWCLMWWLAQDSSCP 370
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 35.5 bits (78), Expect = 0.050
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 373 ECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
EC ICL+E++ + C +H C +W R CP
Sbjct: 1025 ECAICLDEMTNFKETIKCQCRRRFHLECATKWLNEKRECP 1064
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 35.5 bits (78), Expect = 0.050
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 373 ECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
EC ICL+E++ + C +H C +W R CP
Sbjct: 1059 ECAICLDEMTNFKETIKCQCRRRFHLECATKWLNEKRECP 1098
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 35.5 bits (78), Expect = 0.050
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 373 ECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
EC ICL+E++ + C +H C +W R CP
Sbjct: 734 ECAICLDEMTNFKETIKCECRRRFHLKCATKWLNEKRECP 773
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 35.1 bits (77), Expect = 0.067
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 310 VMCLTRPRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSC 489
+ C T L ++D C +CLE + D++ + C +H C++QW + +C
Sbjct: 238 IECTTSNDLFSSDDTSLTELPTCAVCLERMD--DSVLAILCNHSFHARCLEQW--ADNTC 293
Query: 490 P 492
P
Sbjct: 294 P 294
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +1
Query: 289 DDIECHLVMCLTRPRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQW 468
+D C +CL L N D+ D + + ++ + G T+ +PC +H C+ W
Sbjct: 68 EDATC--AICLDN--LQNNVDIPEDHVIKEELKIDPTTFGTTVIVMPCKHRFHYFCLTLW 123
Query: 469 FEVNRSCP 492
E ++CP
Sbjct: 124 LEAQQTCP 131
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 32.7 bits (71), Expect = 0.36
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 190 QAFGTTNSHNGERNYARKEIGIKCPVCSKFV--LPDDIECHLVMCLTRPRLSYNEDVLSD 363
Q+ T +H NYA+ + C+ F + ++ EC + C+T R ED D
Sbjct: 3460 QSLDGTCTHEDCVNYAKTACQVM-HTCNHFCGGIRNEEEC--LPCMTCKR----EDAAQD 3512
Query: 364 SKGECVICLEELSAGDTIARLPCLCIYHKGCI 459
CVIC E RL C ++H C+
Sbjct: 3513 GDDVCVICFTERLGAAPCIRLGCGHMFHFHCV 3544
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 373 ECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
EC+ C E SA + C +H C+ QW N CP
Sbjct: 60 ECLRCQSEPSAECYVVWGDCNHSFHHCCMTQWIRQNNRCP 99
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 RLSYNEDV-LSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 492
RLS + V L + + C IC E+ I PC +H C+ +W V CP
Sbjct: 588 RLSKADVVQLREREDVCAICFIEMKEEARIT--PCKHYFHGPCLRKWLAVKMVCP 640
>Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical
protein F54B11.5 protein.
Length = 201
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 358 SDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNR--SCP 492
SD +G CVIC+E ++ D + LPCL + CI E SCP
Sbjct: 123 SDVEGNCVICMENIN--DLL--LPCLHAFCIRCIANEMEYRHDFSCP 165
>U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical
protein F55G1.6 protein.
Length = 350
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +1
Query: 358 SDSKGECVICLEE--LSAGDTIA-RL-PCLC--IYHKGCIDQWFEVNRSCPE 495
S S G C C + L GD + +L PC C ++H GC+ E SC E
Sbjct: 112 STSPGTCTNCNDSNYLEDGDVLGYKLKPCFCRKLFHFGCLRSLIEEQASCSE 163
>U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absentia
protein homologue-1 protein.
Length = 339
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +1
Query: 256 KCPVCSKFVLPDDIEC---HLVMCLTRPRL 336
+CPVC +++LP ++C HLV RP+L
Sbjct: 89 ECPVCLEYMLPPYMQCSSGHLVCSNCRPKL 118
>AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical
protein Y37E11AR.2 protein.
Length = 419
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +1
Query: 256 KCPVCSKFVLPDDIEC---HLVMCLTRPRL 336
+CPVC +++LP ++C HLV RP+L
Sbjct: 155 ECPVCLEYMLPPYMQCSSGHLVCSNCRPKL 184
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 349 DVLSDSKG-ECVICLEELSAGDTIARLPC--LCIYHKGCIDQWFEVNRSCP 492
+ + D G EC+ICL ++ DT+ LPC LC+ C D + +CP
Sbjct: 259 ETMDDDSGLECIICLSDIR--DTVI-LPCRHLCVC-SNCADSLRYKHNNCP 305
>Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical
protein D2089.2 protein.
Length = 180
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = +1
Query: 376 CVICLEELSAGDTIARLPCLC-----IYHKGCIDQW 468
C IC + ++ D++ + PC C H GC++QW
Sbjct: 25 CRICFDNDTSSDSLIK-PCSCSGTVAYVHNGCLEQW 59
>U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical
protein K10B2.5 protein.
Length = 1009
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 193 LDPSQNNITALRSRN-NKCNKNKIDHTSKTKLFMRSFHTFTPR 68
LD + + L +RN +K + N++DH KT+ + F T TP+
Sbjct: 216 LDGTPKRPSPLTTRNIHKVDINRMDHLMKTENTVAGFITLTPQ 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,823,026
Number of Sequences: 27780
Number of extensions: 313030
Number of successful extensions: 861
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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